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<div class="moz-cite-prefix">It works in another version of MPICH2
and BLCR?<br>
<br>
Best regards,<br>
Marcelo.<br>
<br>
<br>
On 07-04-2014 09:16, Wesley Bland wrote:<br>
</div>
<blockquote
cite="mid:CAFO36wkMavOeHhdqYCixN5nWdYeV0CXDkvHyBYkppw36sfBKCQ@mail.gmail.com"
type="cite">Unfortunately, this is a known problem at the moment.
BLCR checkpointing hasn't worked for a few versions now. It's
something we're working to fix in a future version.
<div><br>
</div>
<div>Thanks,</div>
<div>Wesley<br>
<br>
On Monday, April 7, 2014, Marcelo Paiva Ramos <<a
moz-do-not-send="true"
href="mailto:marcelo.paiva@cptec.inpe.br">marcelo.paiva@cptec.inpe.br</a>>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">
<div text="#000000" bgcolor="#FFFFFF">
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">Hi,</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">Can
you help me to solve this problem?<br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>cat /etc/issue</div>
<div>CentOS release 6.5 (Final)</div>
<div>Kernel \r on an \m</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>uname -a</div>
<div>Linux server 2.6.32-431.11.2.el6.x86_64 #1 SMP Tue
Mar 25 19:59:55 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<b
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">INSTALL:
blcr-0.8.5</b><br
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>tar xzvf blcr-0.8.5.tar.gz</div>
<div>cd blcr-0.8.5</div>
<div>mkdir builddir</div>
<div>cd builddir</div>
<div>../configure --prefix=/opt/blcr</div>
<div>make</div>
<div>make install</div>
<div>/sbin/insmod /opt/blcr/lib/blcr/2.6.32-431.11.2.el6.x86_64/blcr_imports.ko</div>
<div>/sbin/insmod /opt/blcr/lib/blcr/2.6.32-431.11.2.el6.x86_64/blcr.ko</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>uname -r</div>
<div>2.6.32-431.11.2.el6.x86_64</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>lsmod | grep blcr</div>
<div>blcr 115465 0 </div>
<div>blcr_imports 10715 1 blcr</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>ldconfig -p | grep blcr</div>
<div><span style="white-space:pre-wrap"> </span>libcr_run.so.0
(libc6,x86-64) => /opt/blcr/lib/libcr_run.so.0</div>
<div><span style="white-space:pre-wrap"> </span>libcr_run.so
(libc6,x86-64) => /opt/blcr/lib/libcr_run.so</div>
<div><span style="white-space:pre-wrap"> </span>libcr_omit.so.0
(libc6,x86-64) => /opt/blcr/lib/libcr_omit.so.0</div>
<div><span style="white-space:pre-wrap"> </span>libcr_omit.so
(libc6,x86-64) => /opt/blcr/lib/libcr_omit.so</div>
<div><span style="white-space:pre-wrap"> </span>libcr.so.0
(libc6,x86-64) => /opt/blcr/lib/libcr.so.0</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><span
style="white-space:pre-wrap"> </span>libcr.so
(libc6,x86-64) => /opt/blcr/lib/libcr.so<br>
chkconfig --list | grep blcr<br>
blcr 0:off 1:off 2:on 3:on
4:on 5:on 6:off<br>
<br>
</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><b>INSTALL: mpich-3.1</b></div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>tar xzvf mpich-3.1.tar.gz</div>
<div>cd mpich-3.1</div>
<div>./configure --disable-fast CFLAGS=-O2 FFLAGS=-O2
CXXFLAGS=-O2 FCFLAGS=-O2 --prefix=/opt/mpich2/
CC=/opt/intel/bin/icc FC=/opt/intel/bin/ifort
F77=/opt/intel/bin/ifort --enable-checkpointing
--with-hydra-ckpointlib=blcr --with-blcr=/opt/blcr
--with-blcr-include=/opt/blcr/include
--with-blcr-lib=/opt/blcr/lib</div>
<div>make</div>
<div>make install</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><b>.bashrc</b></div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>export PATH=$PATH:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/blcr/bin:/opt/mpich2/bin</div>
<div>export LD_LIBRARY_PATH=/usr/local/lib:/usr/local/lib64:/opt/intel/lib/intel64:/opt/blcr/lib:/opt/mpich2/lib</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div><b>mpiexec -info</b></div>
<div>HYDRA build details:</div>
<div> Version: 3.1</div>
<div> Release Date: Thu Feb
20 11:41:13 CST 2014</div>
<div> CC:
/opt/intel/bin/icc -O2 </div>
<div> CXX: g++ -O2 </div>
<div> F77:
/opt/intel/bin/ifort -O2 </div>
<div> F90:
/opt/intel/bin/ifort -O2 </div>
<div> Configure options:
'--disable-option-checking' '--prefix=/opt/mpich2'
'--disable-fast' 'CFLAGS=-O2 -O0' 'FFLAGS=-O2 -O0'
'CXXFLAGS=-O2 ' 'FCFLAGS=-O2 ' 'CC=/opt/intel/bin/icc'
'FC=/opt/intel/bin/ifort' 'F77=/opt/intel/bin/ifort'
'--enable-checkpointing' '--with-hydra-ckpointlib=blcr'
'--with-blcr=/opt/blcr' '--with-blcr-include=/opt/blcr/include'
'--with-blcr-lib=/opt/blcr/lib' '--cache-file=/dev/null'
'--srcdir=.' 'LDFLAGS= -L/opt/blcr/lib' 'LIBS=-lrt -lcr
-lpthread ' 'CPPFLAGS= -I/root/mpich-3.1/src/mpl/include
-I/root/mpich-3.1/src/mpl/include
-I/root/mpich-3.1/src/openpa/src
-I/root/mpich-3.1/src/openpa/src
-I/root/mpich-3.1/src/mpi/romio/include
-I/opt/blcr/include'</div>
<div> Process Manager: pmi</div>
<div> Launchers available: ssh rsh
fork slurm ll lsf sge pbs manual persist</div>
<div> Topology libraries available: hwloc</div>
<div> Resource management kernels available: user
slurm ll lsf sge pbs cobalt</div>
<div> Checkpointing libraries available: blcr</div>
<div> Demux engines available: poll
select</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><b>ERROR</b></div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">
<div>mpiexec -n 1 -ckpointlib blcr -ckpoint-interval 20
-ckpoint-prefix /home/marcelo/TESTE/ ./teste</div>
<div>[proxy:0:0@server] requesting checkpoint</div>
<div>[proxy:0:0@server] checkpoint completed</div>
<div>[proxy:0:0@server] HYDT_ckpoint_blcr_checkpoint
(tools/ckpoint/blcr/ckpoint_blcr.c:241): Checkpointing
failed. Make sure BLCR kernel module is loaded. Unknown
error 2356</div>
<div>[proxy:0:0@server] ckpoint_thread
(tools/ckpoint/ckpoint.c:76): blcr checkpoint returned
error</div>
<div>[proxy:0:0@server] requesting checkpoint</div>
<div>[proxy:0:0@server] checkpoint completed</div>
<div>[proxy:0:0@server] HYDT_ckpoint_blcr_checkpoint
(tools/ckpoint/blcr/ckpoint_blcr.c:241): Checkpointing
failed. Make sure BLCR kernel module is loaded. Unknown
error 2356</div>
<div>[proxy:0:0@server] ckpoint_thread
(tools/ckpoint/ckpoint.c:76): blcr checkpoint returned
error</div>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px"><br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">Best
regards,<br>
</div>
<div
style="text-indent:0px;letter-spacing:normal;font-variant:normal;text-align:start;font-style:normal;font-weight:normal;line-height:normal;color:rgb(34,34,34);text-transform:none;font-size:13px;white-space:normal;font-family:arial,sans-serif;word-spacing:0px">Marcelo.</div>
</div>
</blockquote>
</div>
<br>
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