This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by MPICH configure 3.1.3, which was generated by GNU Autoconf 2.69. Invocation command line was $ /data/test-WRF-mpi/MPI/mpich-3.1.3/configure CC=gcc --disable-cxx -prefix=/data/test-WRF-mpi/MPI/mpich-install ## --------- ## ## Platform. ## ## --------- ## hostname = airquality uname -m = i686 uname -r = 2.6.9-5.ELsmp uname -s = Linux uname -v = #1 SMP Wed Jan 5 19:30:39 EST 2005 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = i686 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /old_data/ncarg/bin PATH: /data/pave PATH: /usr/pgi/linux86/7.2/bin PATH: /old_data/ncarg/bin PATH: /data/pave PATH: /usr/pgi/linux86/7.2/bin PATH: /usr/kerberos/sbin PATH: /usr/kerberos/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /sbin PATH: /bin PATH: /usr/sbin PATH: /usr/bin PATH: /usr/X11R6/bin PATH: /root/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:5165: checking for C compiler version configure:5174: gcc --version >&5 gcc (GCC) 3.4.3 20041212 (Red Hat 3.4.3-9.EL4) Copyright (C) 2004 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5185: $? = 0 configure:5174: gcc -v >&5 Reading specs from /usr/lib/gcc/i386-redhat-linux/3.4.3/specs Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --disable-checking --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-java-awt=gtk --host=i386-redhat-linux Thread model: posix gcc version 3.4.3 20041212 (Red Hat 3.4.3-9.EL4) configure:5185: $? = 0 configure:5174: gcc -V >&5 gcc: `-V' option must have argument configure:5185: $? = 1 configure:5174: gcc -qversion >&5 gcc: unrecognized option `-qversion' gcc: no input files configure:5185: $? = 1 configure:5205: checking whether the C compiler works configure:5227: gcc conftest.c >&5 configure:5231: $? = 0 configure:5279: result: yes configure:5282: checking for C compiler default output file name configure:5284: result: a.out configure:5290: checking for suffix of executables configure:5297: gcc -o conftest conftest.c >&5 configure:5301: $? = 0 configure:5323: result: configure:5345: checking whether we are cross compiling configure:5353: gcc -o conftest conftest.c >&5 configure:5357: $? = 0 configure:5364: ./conftest configure:5368: $? = 0 configure:5383: result: no configure:5388: checking for suffix of object files configure:5410: gcc -c conftest.c >&5 configure:5414: $? = 0 configure:5435: result: o configure:5439: checking whether we are using the GNU C compiler configure:5458: gcc -c conftest.c >&5 configure:5458: $? = 0 configure:5467: result: yes configure:5476: checking whether gcc accepts -g configure:5496: gcc -c -g conftest.c >&5 configure:5496: $? = 0 configure:5537: result: yes configure:5554: checking for gcc option to accept ISO C89 configure:5617: gcc -c conftest.c >&5 configure:5617: $? = 0 configure:5630: result: none needed configure:5655: checking whether gcc understands -c and -o together configure:5677: gcc -c conftest.c -o conftest2.o configure:5680: $? = 0 configure:5677: gcc -c conftest.c -o conftest2.o configure:5680: $? = 0 configure:5692: result: yes configure:5727: checking how to run the C preprocessor configure:5758: gcc -E conftest.c configure:5758: $? = 0 configure:5772: gcc -E conftest.c conftest.c:9:28: ac_nonexistent.h: No such file or directory configure:5772: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | /* end confdefs.h. */ | #include configure:5797: result: gcc -E configure:5817: gcc -E conftest.c configure:5817: $? = 0 configure:5831: gcc -E conftest.c conftest.c:9:28: ac_nonexistent.h: No such file or directory configure:5831: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | /* end confdefs.h. */ | #include configure:5891: checking for a BSD-compatible install configure:5959: result: /usr/bin/install -c configure:5970: checking whether build environment is sane configure:6025: result: yes configure:6173: checking for a thread-safe mkdir -p configure:6212: result: /bin/mkdir -p configure:6219: checking for gawk configure:6235: found /bin/gawk configure:6246: result: gawk configure:6257: checking whether make sets $(MAKE) configure:6279: result: yes configure:6309: checking for style of include used by make configure:6337: result: GNU configure:6371: checking whether make supports nested variables configure:6388: result: yes configure:6473: checking dependency style of gcc configure:6584: result: gcc3 configure:6642: checking whether to enable maintainer-specific portions of Makefiles configure:6651: result: yes configure:6715: checking for ar configure:6731: found /usr/bin/ar configure:6742: result: ar configure:6768: checking the archiver (ar) interface configure:6784: gcc -c conftest.c >&5 configure:6784: $? = 0 configure:6786: ar cru libconftest.a conftest.o >&5 configure:6789: $? = 0 configure:6817: result: ar configure:6867: checking build system type configure:6881: result: i686-pc-linux-gnu configure:6901: checking host system type configure:6914: result: i686-pc-linux-gnu configure:6955: checking how to print strings configure:6982: result: printf configure:7003: checking for a sed that does not truncate output configure:7067: result: /bin/sed configure:7085: checking for grep that handles long lines and -e configure:7143: result: /bin/grep configure:7148: checking for egrep configure:7210: result: /bin/grep -E configure:7215: checking for fgrep configure:7277: result: /bin/grep -F configure:7312: checking for ld used by gcc configure:7379: result: /usr/bin/ld configure:7386: checking if the linker (/usr/bin/ld) is GNU ld configure:7401: result: yes configure:7413: checking for BSD- or MS-compatible name lister (nm) configure:7462: result: /usr/bin/nm -B configure:7592: checking the name lister (/usr/bin/nm -B) interface configure:7599: gcc -c conftest.c >&5 configure:7602: /usr/bin/nm -B "conftest.o" configure:7605: output 00000000 B some_variable configure:7612: result: BSD nm configure:7615: checking whether ln -s works configure:7619: result: yes configure:7627: checking the maximum length of command line arguments configure:7757: result: 98304 configure:7774: checking whether the shell understands some XSI constructs configure:7784: result: yes configure:7788: checking whether the shell understands "+=" configure:7794: result: no configure:7829: checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format configure:7869: result: func_convert_file_noop configure:7876: checking how to convert i686-pc-linux-gnu file names to toolchain format configure:7896: result: func_convert_file_noop configure:7903: checking for /usr/bin/ld option to reload object files configure:7910: result: -r configure:7984: checking for objdump configure:8000: found /usr/bin/objdump configure:8011: result: objdump configure:8043: checking how to recognize dependent libraries configure:8245: result: pass_all configure:8330: checking for dlltool configure:8360: result: no configure:8390: checking how to associate runtime and link libraries configure:8417: result: printf %s\n configure:8541: checking for archiver @FILE support configure:8558: gcc -c conftest.c >&5 configure:8558: $? = 0 configure:8561: ar cru libconftest.a @conftest.lst >&5 ar: @conftest.lst: No such file or directory configure:8564: $? = 1 configure:8584: result: no configure:8642: checking for strip configure:8658: found /usr/bin/strip configure:8669: result: strip configure:8741: checking for ranlib configure:8757: found /usr/bin/ranlib configure:8768: result: ranlib configure:8870: checking command to parse /usr/bin/nm -B output from gcc object configure:8990: gcc -c conftest.c >&5 configure:8993: $? = 0 configure:8997: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:9000: $? = 0 configure:9066: gcc -o conftest conftest.c conftstm.o >&5 configure:9069: $? = 0 configure:9107: result: ok configure:9144: checking for sysroot configure:9174: result: no configure:9436: checking for mt configure:9452: found /bin/mt configure:9463: result: mt configure:9486: checking if mt is a manifest tool configure:9492: mt '-?' usage: mt [-v] [--version] [-h] [ -f device ] command [ count ] configure:9500: result: no configure:10138: checking for ANSI C header files configure:10158: gcc -c conftest.c >&5 configure:10158: $? = 0 configure:10231: gcc -o conftest conftest.c >&5 configure:10231: $? = 0 configure:10231: ./conftest configure:10231: $? = 0 configure:10242: result: yes configure:10255: checking for sys/types.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for sys/stat.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for stdlib.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for string.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for memory.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for strings.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for inttypes.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for stdint.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10255: checking for unistd.h configure:10255: gcc -c conftest.c >&5 configure:10255: $? = 0 configure:10255: result: yes configure:10269: checking for dlfcn.h configure:10269: gcc -c conftest.c >&5 configure:10269: $? = 0 configure:10269: result: yes configure:10475: checking for objdir configure:10490: result: .libs configure:10761: checking if gcc supports -fno-rtti -fno-exceptions configure:10779: gcc -c -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C configure:10783: $? = 0 configure:10796: result: no configure:11123: checking for gcc option to produce PIC configure:11130: result: -fPIC -DPIC configure:11138: checking if gcc PIC flag -fPIC -DPIC works configure:11156: gcc -c -fPIC -DPIC -DPIC conftest.c >&5 configure:11160: $? = 0 configure:11173: result: yes configure:11202: checking if gcc static flag -static works configure:11230: result: yes configure:11245: checking if gcc supports -c -o file.o configure:11266: gcc -c -o out/conftest2.o conftest.c >&5 configure:11270: $? = 0 configure:11292: result: yes configure:11300: checking if gcc supports -c -o file.o configure:11347: result: yes configure:11380: checking whether the gcc linker (/usr/bin/ld) supports shared libraries configure:12535: result: yes configure:12572: checking whether -lc should be explicitly linked in configure:12580: gcc -c conftest.c >&5 configure:12583: $? = 0 configure:12598: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:12601: $? = 0 configure:12615: result: no configure:12775: checking dynamic linker characteristics configure:13286: gcc -o conftest -Wl,-rpath -Wl,/foo conftest.c >&5 configure:13286: $? = 0 configure:13508: result: GNU/Linux ld.so configure:13615: checking how to hardcode library paths into programs configure:13640: result: immediate configure:14180: checking whether stripping libraries is possible configure:14185: result: yes configure:14220: checking if libtool supports shared libraries configure:14222: result: yes configure:14225: checking whether to build shared libraries configure:14246: result: yes configure:14249: checking whether to build static libraries configure:14253: result: yes configure:14302: checking whether make supports nested variables configure:14319: result: yes configure:14476: checking for C++ compiler version configure:14485: no --version >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 14487: no: command not found configure:14496: $? = 127 configure:14485: no -v >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 14487: no: command not found configure:14496: $? = 127 configure:14485: no -V >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 14487: no: command not found configure:14496: $? = 127 configure:14485: no -qversion >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 14487: no: command not found configure:14496: $? = 127 configure:14500: checking whether we are using the GNU C++ compiler configure:14519: no -c conftest.cpp >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 2644: no: command not found configure:14519: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | int | main () | { | #ifndef __GNUC__ | choke me | #endif | | ; | return 0; | } configure:14528: result: no configure:14537: checking whether no accepts -g configure:14557: no -c -g conftest.cpp >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 2644: no: command not found configure:14557: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:14572: no -c conftest.cpp >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 2644: no: command not found configure:14572: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:14588: no -c -g conftest.cpp >&5 /data/test-WRF-mpi/MPI/mpich-3.1.3/configure: line 2644: no: command not found configure:14588: $? = 127 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:14598: result: no configure:14623: checking dependency style of no configure:14734: result: none configure:18004: checking for ifort configure:18034: result: no configure:18004: checking for pgf90 configure:18020: found /usr/pgi/linux86/7.2/bin/pgf90 configure:18031: result: pgf90 configure:18057: checking for Fortran compiler version configure:18066: pgf90 --version >&5 pgf90-Error-Unknown switch: --version configure:18077: $? = 1 configure:18066: pgf90 -v >&5 pgf90-Warning-No files to process configure:18077: $? = 0 configure:18066: pgf90 -V >&5 pgf90 7.2-1 32-bit target on x86 Linux -tp p7 Copyright 1989-2000, The Portland Group, Inc. All Rights Reserved. Copyright 2000-2008, STMicroelectronics, Inc. All Rights Reserved. configure:18077: $? = 0 configure:18066: pgf90 -qversion >&5 pgf90-Error-Unknown switch: -qversion configure:18077: $? = 1 configure:18086: checking whether we are using the GNU Fortran compiler configure:18099: pgf90 -c conftest.F >&5 PGF90-S-0034-Syntax error at or near end of line (conftest.F: 3) 0 inform, 0 warnings, 1 severes, 0 fatal for main configure:18099: $? = 2 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:18108: result: no configure:18114: checking whether pgf90 accepts -g configure:18125: pgf90 -c -g conftest.f >&5 configure:18125: $? = 0 configure:18133: result: yes configure:18272: checking if libtool supports shared libraries configure:18274: result: yes configure:18277: checking whether to build shared libraries configure:18297: result: yes configure:18300: checking whether to build static libraries configure:18304: result: yes configure:18338: pgf90 -c conftest.f >&5 configure:18341: $? = 0 configure:18770: checking for pgf90 option to produce PIC configure:18777: result: -fpic configure:18785: checking if pgf90 PIC flag -fpic works configure:18803: pgf90 -c -fpic conftest.f >&5 configure:18807: $? = 0 configure:18820: result: yes configure:18843: checking if pgf90 static flag -Bstatic works configure:18871: result: yes configure:18883: checking if pgf90 supports -c -o file.o configure:18904: pgf90 -c -o out/conftest2.o conftest.f >&5 configure:18908: $? = 0 configure:18930: result: yes configure:18935: checking if pgf90 supports -c -o file.o configure:18982: result: yes configure:19012: checking whether the pgf90 linker (/usr/bin/ld) supports shared libraries configure:20117: result: yes configure:20258: checking dynamic linker characteristics configure:20919: result: GNU/Linux ld.so configure:20972: checking how to hardcode library paths into programs configure:20997: result: immediate configure:21192: checking for Fortran 77 compiler version configure:21201: pgf90 --version >&5 pgf90-Error-Unknown switch: --version configure:21212: $? = 1 configure:21201: pgf90 -v >&5 pgf90-Warning-No files to process configure:21212: $? = 0 configure:21201: pgf90 -V >&5 pgf90 7.2-1 32-bit target on x86 Linux -tp p7 Copyright 1989-2000, The Portland Group, Inc. All Rights Reserved. Copyright 2000-2008, STMicroelectronics, Inc. All Rights Reserved. configure:21212: $? = 0 configure:21201: pgf90 -qversion >&5 pgf90-Error-Unknown switch: -qversion configure:21212: $? = 1 configure:21221: checking whether we are using the GNU Fortran 77 compiler configure:21234: pgf90 -c conftest.F >&5 PGF90-S-0034-Syntax error at or near end of line (conftest.F: 3) 0 inform, 0 warnings, 1 severes, 0 fatal for main configure:21234: $? = 2 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:21243: result: no configure:21249: checking whether pgf90 accepts -g configure:21260: pgf90 -c -g conftest.f >&5 configure:21260: $? = 0 configure:21268: result: yes configure:21404: checking if libtool supports shared libraries configure:21406: result: yes configure:21409: checking whether to build shared libraries configure:21429: result: yes configure:21432: checking whether to build static libraries configure:21436: result: yes configure:21757: checking for pgf90 option to produce PIC configure:21764: result: -fpic configure:21772: checking if pgf90 PIC flag -fpic works configure:21790: pgf90 -c -fpic conftest.f >&5 configure:21794: $? = 0 configure:21807: result: yes configure:21830: checking if pgf90 static flag -Bstatic works configure:21858: result: yes configure:21870: checking if pgf90 supports -c -o file.o configure:21891: pgf90 -c -o out/conftest2.o conftest.f >&5 configure:21895: $? = 0 configure:21917: result: yes configure:21922: checking if pgf90 supports -c -o file.o configure:21969: result: yes configure:21999: checking whether the pgf90 linker (/usr/bin/ld) supports shared libraries configure:23104: result: yes configure:23245: checking dynamic linker characteristics configure:23906: result: GNU/Linux ld.so configure:23959: checking how to hardcode library paths into programs configure:23984: result: immediate configure:25186: checking hcoll/api/hcoll_api.h usability configure:25186: gcc -c conftest.c >&5 conftest.c:56:33: hcoll/api/hcoll_api.h: No such file or directory configure:25186: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:25186: result: no configure:25186: checking hcoll/api/hcoll_api.h presence configure:25186: gcc -E conftest.c conftest.c:23:33: hcoll/api/hcoll_api.h: No such file or directory configure:25186: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:25186: result: no configure:25186: checking for hcoll/api/hcoll_api.h configure:25186: result: no configure:25194: checking for hcoll_init in -lhcoll configure:25219: gcc -o conftest conftest.c -lhcoll >&5 /usr/bin/ld: cannot find -lhcoll collect2: ld returned 1 exit status configure:25219: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char hcoll_init (); | int | main () | { | return hcoll_init (); | ; | return 0; | } configure:25228: result: no configure:25436: RUNNING PREREQ FOR ch3:nemesis configure:25520: checking for getpagesize configure:25520: gcc -o conftest conftest.c >&5 configure:25520: $? = 0 configure:25520: result: yes configure:25608: checking for getpagesize configure:25608: result: yes configure:26170: ===== configuring src/mpl ===== configure:26335: running /bin/sh ./configure --disable-option-checking '--prefix=/data/test-WRF-mpi/MPI/mpich-install' 'CC=gcc' '--disable-cxx' --cache-file=/dev/null --srcdir=. configure:26355: ===== done with src/mpl configure ===== configure:26361: sourcing src/mpl/localdefs CPPFLAGS(=' ') does not contain '-I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include', appending CPPFLAGS(=' -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include') does not contain '-I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include', appending LIBS(=' ') does not contain '-lopa', prepending configure:26479: gcc -o conftest -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include conftest.c -lopa >&5 conftest.c:28:28: opa_primitives.h: No such file or directory conftest.c: In function `main': conftest.c:34: error: `OPA_int_t' undeclared (first use in this function) conftest.c:34: error: (Each undeclared identifier is reported only once conftest.c:34: error: for each function it appears in.) conftest.c:34: error: syntax error before "i" conftest.c:35: error: `i' undeclared (first use in this function) configure:26479: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | /* end confdefs.h. */ | #include "opa_primitives.h" | | int | main () | { | | OPA_int_t i; | OPA_store_int(i,10); | OPA_fetch_and_incr_int(&i,5); | | ; | return 0; | } CPPFLAGS(=' -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include') does not contain '-I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src', appending CPPFLAGS(=' -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src') does not contain '-I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src', appending configure:26544: ===== configuring src/openpa ===== configure:26709: running /bin/sh ./configure --disable-option-checking '--prefix=/data/test-WRF-mpi/MPI/mpich-install' --with-atomic-primitives=auto_allow_emulation 'CC=gcc' '--disable-cxx' --cache-file=/dev/null --srcdir=. configure:26729: ===== done with src/openpa configure ===== CPPFLAGS(=' -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src') does not contain '-D_REENTRANT', appending CPPFLAGS(=' -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT') does not contain '-I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include', appending configure:27393: checking whether the compiler defines __func__ configure:27420: gcc -o conftest -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:27420: $? = 0 configure:27420: ./conftest configure:27420: $? = 0 configure:27457: result: yes configure:27466: checking whether the compiler defines __FUNC__ configure:27493: gcc -o conftest -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `foo': conftest.c:40: error: `__FUNC__' undeclared (first use in this function) conftest.c:40: error: (Each undeclared identifier is reported only once conftest.c:40: error: for each function it appears in.) configure:27493: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | /* end confdefs.h. */ | | | #include | int foo(void); | int foo(void) | { | return (strcmp(__FUNC__, "foo") == 0); | } | int main(int argc, char ** argv) | { | return (foo() ? 0 : 1); | } | | configure:27530: result: no configure:27539: checking whether the compiler sets __FUNCTION__ configure:27566: gcc -o conftest -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:27566: $? = 0 configure:27566: ./conftest configure:27566: $? = 0 configure:27603: result: yes configure:27618: checking whether C compiler accepts option -O2 configure:27673: gcc -o conftest -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c > pac_test1.log 2>&1 configure:27673: $? = 0 configure:27704: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c > pac_test2.log 2>&1 configure:27704: $? = 0 configure:27712: diff -b pac_test1.log pac_test2.log > pac_test.log configure:27715: $? = 0 configure:27815: result: yes configure:27831: checking whether C compiler option -O2 works with an invalid prototype program configure:27839: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:27839: $? = 0 configure:27846: result: yes configure:27851: checking whether routines compiled with -O2 can be linked with ones compiled without -O2 configure:27891: gcc -c -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c > pac_test3.log 2>&1 configure:27891: $? = 0 configure:27895: mv conftest.o pac_conftest.o configure:27898: $? = 0 configure:27941: gcc -o conftest -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_conftest.o > pac_test4.log 2>&1 configure:27941: $? = 0 configure:27983: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_conftest.o > pac_test5.log 2>&1 configure:27983: $? = 0 configure:27991: diff -b pac_test4.log pac_test5.log > pac_test.log configure:27994: $? = 0 configure:28133: result: yes configure:28166: checking for type of weak symbol alias support configure:28190: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:28190: $? = 0 configure:28214: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:28214: $? = 0 configure:28217: mv conftest.o pac_conftest.o configure:28220: $? = 0 configure:28257: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_conftest.o >&5 configure:28257: $? = 0 configure:28272: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:28272: $? = 0 configure:28275: mv conftest.o pac_conftest.o configure:28278: $? = 0 configure:28316: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_conftest.o >&5 configure:28316: $? = 0 configure:28473: result: pragma weak configure:28491: checking whether __attribute__ ((weak)) allowed configure:28508: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:28508: $? = 0 configure:28515: result: yes configure:28519: checking whether __attribute__ ((weak_import)) allowed configure:28536: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:36: warning: `weak_import' attribute directive ignored configure:28536: $? = 0 configure:28543: result: yes configure:28546: checking whether __attribute__((weak,alias(...))) allowed configure:28572: gcc -c -Werror -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:28572: $? = 0 configure:28585: result: yes configure:28607: checking for multiple weak symbol support configure:28630: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:28630: $? = 0 configure:28633: mv conftest.o pac_conftest.o configure:28636: $? = 0 configure:28673: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_conftest.o >&5 configure:28673: $? = 0 configure:28723: result: yes configure:28767: checking for shared library (esp. rpath) characteristics of CC configure:28858: result: done (results in src/env/cc_shlib.conf) configure:28976: checking whether Fortran 77 compiler accepts option -O2 configure:29021: pgf90 -o conftest conftest.f > pac_test1.log 2>&1 configure:29021: $? = 0 configure:29052: pgf90 -o conftest -O2 conftest.f > pac_test2.log 2>&1 configure:29052: $? = 0 configure:29060: diff -b pac_test1.log pac_test2.log > pac_test.log configure:29063: $? = 0 configure:29163: result: yes configure:29168: checking whether routines compiled with -O2 can be linked with ones compiled without -O2 configure:29207: pgf90 -c conftest.f > pac_test3.log 2>&1 configure:29207: $? = 0 configure:29211: mv conftest.o pac_conftest.o configure:29214: $? = 0 configure:29252: pgf90 -o conftest -O2 conftest.f pac_conftest.o > pac_test4.log 2>&1 configure:29252: $? = 0 configure:29260: diff -b pac_test2.log pac_test4.log > pac_test.log configure:29263: $? = 1 configure: program exited with status 1 *** diff -b pac_test2.log pac_test4.log : 0a1 > conftest.f: configure:29364: result: no configure:29402: checking how to get verbose linking output from pgf90 configure:29412: pgf90 -c conftest.f >&5 configure:29412: $? = 0 configure:29430: pgf90 -o conftest -v conftest.f /usr/pgi/linux86/7.2-1/bin/newcg/pgf901 conftest.f -opt 1 -nohpf -nostatic -x 119 0x100000 -x 19 0x400000 -x 59 4 -x 15 2 -x 49 0x400004 -x 51 0x20 -x 57 0x4c -x 58 0x10000 -x 124 0x1000 -x 57 0xfb0000 -x 58 0x78031040 -x 48 3328 -stdinc /usr/pgi/linux86/7.2-1/include:/usr/local/include:/usr/lib/gcc/i386-redhat-linux/3.4.3/include:/usr/lib/gcc/i386-redhat-linux/3.4.3/include:/usr/include -def unix -def __unix -def __unix__ -def linux -def __linux -def __linux__ -def i386 -def __i386 -def __i386__ -def __NO_MATH_INLINES -def linux86 -def __THROW= -def __extension__= -def __SSE__ -def __MMX__ -def __SSE2__ -def __SSE3__ -nofreeform -vect 48 -modexport /tmp/pgf90HpmbJfXXeXdU.cmod -modindex /tmp/pgf90Ppmb7Xzub09B.cmdx -output /tmp/pgf90zpmblKSdgn1n.ilm 0 inform, 0 warnings, 0 severes, 0 fatal for main PGF90/x86 Linux 7.2-1: compilation successful /usr/pgi/linux86/7.2-1/bin/newcg/pgf902 /tmp/pgf90zpmblKSdgn1n.ilm -fn conftest.f -opt 1 -x 51 0x20 -x 119 0xa10000 -x 119 0x100000 -x 122 0x40 -x 123 0x1000 -x 127 4 -x 127 17 -x 119 0x40000000 -x 19 0x400000 -x 28 0x40000 -x 70 0x8000 -x 122 1 -x 59 4 -tp p7 -x 124 0x1400 -y 15 2 -x 57 0x3b0000 -x 58 0x48000000 -astype 0 -x 124 1 -cmdline '+pgf90 conftest.f -o conftest -v' -asm /tmp/pgf90XpmbtbiWO_iL.s 0 inform, 0 warnings, 0 severes, 0 fatal for main PGF90/x86 Linux 7.2-1: compilation successful /usr/bin/as /tmp/pgf90XpmbtbiWO_iL.s -o /tmp/pgf905pmbRlOToFOd.o /usr/pgi/linux86/7.2-1/bin/pgappend -noerror /tmp/pgf905pmbRlOToFOd.o -name .IPDINFO /tmp/pgf90HpmbJfXXeXdU.cmod -name .IPEINFO /tmp/pgf90Ppmb7Xzub09B.cmdx /usr/bin/ld /usr/lib/crt1.o /usr/lib/crti.o /usr/pgi/linux86/7.2-1/lib/trace_init.o /usr/lib/gcc/i386-redhat-linux/3.4.3/crtbegin.o /usr/pgi/linux86/7.2-1/lib/f90main.o -m elf_i386 -dynamic-linker /lib/ld-linux.so.2 /usr/pgi/linux86/7.2-1/lib/pgi.ld -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 /tmp/pgf905pmbRlOToFOd.o -rpath /usr/pgi/linux86/7.2-1/lib -o conftest -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm -lgcc -lc -lgcc /usr/lib/gcc/i386-redhat-linux/3.4.3/crtend.o /usr/lib/crtn.o Unlinking /tmp/pgf90zpmblKSdgn1n.ilm Unlinking /tmp/pgf90HpmbJfXXeXdU.cmod Unlinking /tmp/pgf90Ppmb7Xzub09B.cmdx Unlinking /tmp/pgf90XpmbtbiWO_iL.s Unlinking /tmp/pgf905pmbRlOToFOd.o configure:29513: result: -v configure:29515: checking for Fortran 77 libraries of pgf90 configure:29538: pgf90 -o conftest -v conftest.f /usr/pgi/linux86/7.2-1/bin/newcg/pgf901 conftest.f -opt 1 -nohpf -nostatic -x 119 0x100000 -x 19 0x400000 -x 59 4 -x 15 2 -x 49 0x400004 -x 51 0x20 -x 57 0x4c -x 58 0x10000 -x 124 0x1000 -x 57 0xfb0000 -x 58 0x78031040 -x 48 3328 -stdinc /usr/pgi/linux86/7.2-1/include:/usr/local/include:/usr/lib/gcc/i386-redhat-linux/3.4.3/include:/usr/lib/gcc/i386-redhat-linux/3.4.3/include:/usr/include -def unix -def __unix -def __unix__ -def linux -def __linux -def __linux__ -def i386 -def __i386 -def __i386__ -def __NO_MATH_INLINES -def linux86 -def __THROW= -def __extension__= -def __SSE__ -def __MMX__ -def __SSE2__ -def __SSE3__ -nofreeform -vect 48 -modexport /tmp/pgf90HMmbJfXXeXdU.cmod -modindex /tmp/pgf90PMmb7Xzub09B.cmdx -output /tmp/pgf90zMmblKSdgn1n.ilm 0 inform, 0 warnings, 0 severes, 0 fatal for main PGF90/x86 Linux 7.2-1: compilation successful /usr/pgi/linux86/7.2-1/bin/newcg/pgf902 /tmp/pgf90zMmblKSdgn1n.ilm -fn conftest.f -opt 1 -x 51 0x20 -x 119 0xa10000 -x 119 0x100000 -x 122 0x40 -x 123 0x1000 -x 127 4 -x 127 17 -x 119 0x40000000 -x 19 0x400000 -x 28 0x40000 -x 70 0x8000 -x 122 1 -x 59 4 -tp p7 -x 124 0x1400 -y 15 2 -x 57 0x3b0000 -x 58 0x48000000 -astype 0 -x 124 1 -cmdline '+pgf90 conftest.f -o conftest -v' -asm /tmp/pgf90XMmbtbiWO_iL.s 0 inform, 0 warnings, 0 severes, 0 fatal for main PGF90/x86 Linux 7.2-1: compilation successful /usr/bin/as /tmp/pgf90XMmbtbiWO_iL.s -o /tmp/pgf905MmbRlOToFOd.o /usr/pgi/linux86/7.2-1/bin/pgappend -noerror /tmp/pgf905MmbRlOToFOd.o -name .IPDINFO /tmp/pgf90HMmbJfXXeXdU.cmod -name .IPEINFO /tmp/pgf90PMmb7Xzub09B.cmdx /usr/bin/ld /usr/lib/crt1.o /usr/lib/crti.o /usr/pgi/linux86/7.2-1/lib/trace_init.o /usr/lib/gcc/i386-redhat-linux/3.4.3/crtbegin.o /usr/pgi/linux86/7.2-1/lib/f90main.o -m elf_i386 -dynamic-linker /lib/ld-linux.so.2 /usr/pgi/linux86/7.2-1/lib/pgi.ld -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 /tmp/pgf905MmbRlOToFOd.o -rpath /usr/pgi/linux86/7.2-1/lib -o conftest -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm -lgcc -lc -lgcc /usr/lib/gcc/i386-redhat-linux/3.4.3/crtend.o /usr/lib/crtn.o Unlinking /tmp/pgf90zMmblKSdgn1n.ilm Unlinking /tmp/pgf90HMmbJfXXeXdU.cmod Unlinking /tmp/pgf90PMmb7Xzub09B.cmdx Unlinking /tmp/pgf90XMmbtbiWO_iL.s Unlinking /tmp/pgf905MmbRlOToFOd.o configure:29734: result: -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm configure:29750: checking whether pgf90 accepts the FLIBS found by autoconf configure:29766: pgf90 -o conftest conftest.f >&5 configure:29766: $? = 0 configure:29768: result: yes configure:29806: checking whether gcc links with FLIBS found by autoconf configure:29831: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm >&5 configure:29831: $? = 0 configure:29833: result: yes configure:29883: checking whether Fortran 77 and C objects are compatible configure:29962: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:29962: $? = 0 configure:29965: mv conftest.o pac_conftest.o configure:29968: $? = 0 configure:29977: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:29977: $? = 0 configure:29980: result: yes configure:30139: checking for linker for Fortran main program configure:30160: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:30160: $? = 0 configure:30219: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:30219: $? = 0 configure:30222: mv conftest.o pac_conftest.o configure:30225: $? = 0 configure:30234: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:30234: $? = 0 configure:30236: result: Use Fortran to link programs configure:30347: checking for Fortran 77 name mangling configure:30369: pgf90 -c conftest.f >&5 configure:30369: $? = 0 configure:30372: mv conftest.o f77conftest.o configure:30375: $? = 0 configure:30400: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c f77conftest.o -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm >&5 configure:30400: $? = 0 configure:30523: result: lower uscore configure:30589: checking for libraries to link Fortran main with C stdio routines configure:30615: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:30615: $? = 0 configure:30618: mv conftest.o pac_conftest.o configure:30621: $? = 0 configure:30640: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:30640: $? = 0 configure:30671: result: none configure:30722: checking whether Fortran init will work with C configure:30744: pgf90 -c conftest.f >&5 configure:30744: $? = 0 configure:30747: mv conftest.o pac_f77conftest.o configure:30750: $? = 0 configure:30794: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_f77conftest.o >&5 pac_f77conftest.o(.data+0x0): undefined reference to `pgf90_compiled' collect2: ld returned 1 exit status configure:30794: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | /* end confdefs.h. */ | | | #if defined(HAVE_STDIO_H) || defined(STDC_HEADERS) | #include | #endif | #ifdef F77_NAME_UPPER | #define minit_ MINIT | #elif defined(F77_NAME_LOWER) || defined(F77_NAME_MIXED) | #define minit_ minit | #endif | extern void minit_(void); | int main( int argc, char **argv ) | { | minit_(); | return 0; | } | char *v1 = 0; | char *vc2 = 0; | int v2 = 0; | void minitc_( char *dv1, int d, char *dv2, int d2, int dv3 ); | void minitc_( char *dv1, int d, char *dv2, int d2, int dv3 ) | { | v1 = dv1; | v2 = dv3; | vc2 = dv2; | *vc2 = ' '; | } | | configure:30817: result: no configure:30916: checking for extension for Fortran 90 programs configure:30931: pgf90 -c conftest.f90 >&5 configure:30931: $? = 0 configure:30933: result: f90 configure:30975: checking whether the Fortran 90 compiler (pgf90 ) works configure:30986: pgf90 -o conftest conftest.f90 >&5 configure:30986: $? = 0 configure:30989: result: yes configure:30991: checking whether the Fortran 90 compiler (pgf90 ) is a cross-compiler configure:30997: pgf90 -o conftest conftest.f90 >&5 configure:30997: $? = 0 configure:30997: ./conftest configure:30997: $? = 0 configure:31006: result: no configure:31029: checking whether Fortran 90 compiler works with Fortran 77 compiler configure:31057: pgf90 -c conftest.f >&5 configure:31057: $? = 0 configure:31061: mv conftest.o pac_f77conftest.o configure:31064: $? = 0 configure:31085: pgf90 -o conftest conftest.f90 pac_f77conftest.o >&5 conftest.f90: configure:31085: $? = 0 configure:31127: result: yes configure:31187: checking for shared library (esp. rpath) characteristics of F77 configure:31280: result: done (results in src/env/f77_shlib.conf) configure:31291: checking whether Fortran 77 accepts ! for comments configure:31309: pgf90 -c conftest.f >&5 configure:31309: $? = 0 configure:31326: result: yes configure:31336: checking for include directory flag for Fortran configure:31363: pgf90 -c -I src conftest.f >&5 configure:31363: $? = 0 configure:31381: result: -I configure:31389: checking for Fortran 77 flag for library directories configure:31408: pgf90 -c conftest.f >&5 configure:31408: $? = 0 configure:31412: mv conftest.o pac_f77conftest.o configure:31415: $? = 0 configure:31418: test -d conftestdir || mkdir conftestdir configure:31421: $? = 0 configure:31424: ar cru conftestdir/libf77conftest.a pac_f77conftest.o configure:31427: $? = 0 configure:31430: ranlib conftestdir/libf77conftest.a configure:31433: $? = 0 configure:31451: pgf90 -o conftest -Lconftestdir conftest.f -lf77conftest >&5 configure:31451: $? = 0 configure:31471: result: -L configure:31547: checking whether Fortran 77 compiler processes .F files with C preprocessor configure:31568: pgf90 -c -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.F >&5 configure:31568: $? = 0 configure:31636: result: yes configure:31644: checking whether pgf90 allows mismatched arguments configure:31667: pgf90 -c conftest.f >&5 configure:31667: $? = 0 configure:31711: result: yes configure:31757: checking for Fortran 2008 support configure:31783: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:48:33: ISO_Fortran_binding.h: No such file or directory conftest.c:50: error: syntax error before '*' token conftest.c: In function `foo_c': conftest.c:52: error: `a_desc' undeclared (first use in this function) conftest.c:52: error: (Each undeclared identifier is reported only once conftest.c:52: error: for each function it appears in.) conftest.c:53: error: `CFI_type_int' undeclared (first use in this function) conftest.c:55: error: `b_desc' undeclared (first use in this function) configure:31783: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | /* end confdefs.h. */ | | | #include | | int foo_c(CFI_cdesc_t * a_desc, CFI_cdesc_t * b_desc) | { | char * a_row = (char*) a_desc->base_addr; | if (a_desc->type != CFI_type_int) { return 1; } | if (a_desc->rank != 2) { return 2; } | if (a_desc->dim[1].extent != b_desc->dim[0].extent) { return 3; } | return 0; | } | configure:31879: pgf90 -o conftest conftest.f90 conftest1.o >&5 conftest.f90: PGF90-S-0034-Syntax error at or near :: (conftest.f90: 9) PGF90-S-0310-Illegal statement in the specification part of a MODULE (conftest.f90: 12) PGF90-F-0070-Incorrect sequence of statements (conftest.f90: 13) PGF90/x86 Linux 7.2-1: compilation aborted configure:31879: $? = 2 configure: failed program was: | | | MODULE F08TS_MODULE | IMPLICIT NONE | | ! Test public, private, protected | REAL, PUBLIC :: x | REAL, PRIVATE :: y | LOGICAL, PROTECTED :: z | | ! Test abstract | ABSTRACT INTERFACE | SUBROUTINE user_func(x, y) | INTEGER :: x(*) | REAL :: y | END SUBROUTINE | END INTERFACE | | ! Test TS 29113 assumed type , assumed rank and bind(C) | INTERFACE | FUNCTION FOO(A, B, C) & | BIND(C,name="foo_c") RESULT(err) | USE, intrinsic :: iso_c_binding, ONLY : c_int | TYPE(*), DIMENSION(..) :: A, B, C | INTEGER(c_int) :: err | END FUNCTION FOO | END INTERFACE | | CONTAINS | | ! Test TS 29113 asychronous attribute and optional | SUBROUTINE test1(buf, count, ierr) | INTEGER, ASYNCHRONOUS :: buf(*) | INTEGER :: count | INTEGER, OPTIONAL :: ierr | END SUBROUTINE | | ! Test procedure type and non-bind(c) x in C_FUNCLOC(x) | SUBROUTINE test2(func) | USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_FUNLOC, C_FUNPTR | PROCEDURE(user_func) :: func | TYPE(C_FUNPTR) :: errhandler_fn | errhandler_fn = C_FUNLOC(func) | END SUBROUTINE | | ! Test intrinsic storage_size | SUBROUTINE test3(x, size) | CHARACTER, DIMENSION(..) :: x | INTEGER, INTENT(OUT) :: size | size = storage_size(x)/8 | END SUBROUTINE test3 | | END MODULE | | !============================================== | PROGRAM MAIN | USE :: F08TS_MODULE, ONLY : FOO | IMPLICIT NONE | | INTEGER, DIMENSION(4,4) :: A, B | INTEGER, DIMENSION(2,2) :: C | INTEGER :: ERRCODE | | ! Test contiguous and non-contiguous array section passing | ! and linkage with C code | ERRCODE = FOO(A(1:4:2, :), B(:, 2:4:2), C) | | END PROGRAM | configure:31903: result: no configure:31954: checking for shared library (esp. rpath) characteristics of FC configure:32047: result: done (results in src/env/fc_shlib.conf) configure:32063: checking whether the Fortran 90 compiler (pgf90 ) works configure:32074: pgf90 -o conftest conftest.f90 >&5 configure:32074: $? = 0 configure:32077: result: yes configure:32079: checking whether the Fortran 90 compiler (pgf90 ) is a cross-compiler configure:32085: pgf90 -o conftest conftest.f90 >&5 configure:32085: $? = 0 configure:32085: ./conftest configure:32085: $? = 0 configure:32094: result: no configure:32140: checking for Fortran 90 module extension configure:32162: pgf90 -c conftest.f90 >&5 configure:32162: $? = 0 configure:32258: result: mod configure:32270: checking for Fortran 90 module include flag configure:32298: pgf90 -c conftest.f90 >&5 configure:32298: $? = 0 configure:32335: pgf90 -c -Iconftestdir conftest.f90 >&5 configure:32335: $? = 0 configure:32394: result: -I configure:32402: checking for Fortran 90 module output directory flag configure:32433: pgf90 -c conftest.f90 >&5 configure:32433: $? = 0 configure:32487: pgf90 -c -Jconftestdir conftest.f90 >&5 pgf90-Error-Unknown switch: -Jconftestdir configure:32487: $? = 1 configure: failed program was: | | | module conf | integer n | parameter (n=1) | end module conf | | configure:32487: pgf90 -c -J conftestdir conftest.f90 >&5 pgf90-Error-Unknown switch: -J configure:32487: $? = 1 configure: failed program was: | | | module conf | integer n | parameter (n=1) | end module conf | | configure:32487: pgf90 -c -qmoddir=conftestdir conftest.f90 >&5 pgf90-Error-Unknown switch: -qmoddir=conftestdir configure:32487: $? = 1 configure: failed program was: | | | module conf | integer n | parameter (n=1) | end module conf | | configure:32487: pgf90 -c -module conftestdir conftest.f90 >&5 configure:32487: $? = 0 configure:32527: result: -module configure:32564: checking whether Fortran 90 compiler accepts option -O2 configure:32609: pgf90 -o conftest conftest.f90 > pac_test1.log 2>&1 configure:32609: $? = 0 configure:32640: pgf90 -o conftest -O2 conftest.f90 > pac_test2.log 2>&1 configure:32640: $? = 0 configure:32648: diff -b pac_test1.log pac_test2.log > pac_test.log configure:32651: $? = 0 configure:32751: result: yes configure:32756: checking whether routines compiled with -O2 can be linked with ones compiled without -O2 configure:32795: pgf90 -c conftest.f90 > pac_test3.log 2>&1 configure:32795: $? = 0 configure:32799: mv conftest.o pac_conftest.o configure:32802: $? = 0 configure:32840: pgf90 -o conftest -O2 conftest.f90 pac_conftest.o > pac_test4.log 2>&1 configure:32840: $? = 0 configure:32848: diff -b pac_test2.log pac_test4.log > pac_test.log configure:32851: $? = 1 configure: program exited with status 1 *** diff -b pac_test2.log pac_test4.log : 0a1 > conftest.f90: configure:32952: result: no configure:32984: checking whether Fortran 90 compiler processes .F90 files with C preprocessor configure:33005: pgf90 -c -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.F90 >&5 configure:33005: $? = 0 configure:33073: result: yes configure:33094: checking what libraries are needed to link Fortran90 programs with C routines that use stdio configure:33120: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:33120: $? = 0 configure:33124: mv conftest.o pac_conftest.o configure:33127: $? = 0 configure:33144: pgf90 -o conftest conftest.f90 pac_conftest.o >&5 conftest.f90: configure:33144: $? = 0 configure:33185: result: none configure:34243: checking for perl configure:34261: found /usr/bin/perl configure:34273: result: /usr/bin/perl configure:34286: checking for ar configure:34313: result: ar configure:34349: checking for ranlib configure:34376: result: ranlib configure:34395: checking for killall configure:34411: found /usr/bin/killall configure:34422: result: killall configure:34465: checking whether install works configure:34473: result: yes configure:34488: checking whether mkdir -p works configure:34504: result: yes configure:34522: checking for make configure:34538: found /usr/bin/make configure:34549: result: make configure:34563: checking whether clock skew breaks make configure:34588: result: no configure:34598: checking whether make supports include configure:34626: result: yes configure:34635: checking whether make allows comments in actions configure:34662: result: yes configure:34676: checking for virtual path format configure:34719: result: VPATH configure:34729: checking whether make sets CFLAGS configure:34755: result: yes configure:34804: checking for bash configure:34822: found /bin/bash configure:34834: result: /bin/bash configure:34857: checking whether /bin/bash supports arrays configure:34866: result: yes configure:35073: checking for doctext configure:35104: result: false configure:35117: checking for an ANSI C-conforming const configure:35183: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35183: $? = 0 configure:35190: result: yes configure:35198: checking for working volatile configure:35217: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35217: $? = 0 configure:35224: result: yes configure:35232: checking for C/C++ restrict keyword configure:35257: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35257: $? = 0 configure:35265: result: __restrict configure:35278: checking for inline configure:35294: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35294: $? = 0 configure:35302: result: inline configure:35325: checking whether __attribute__ allowed configure:35342: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35342: $? = 0 configure:35349: result: yes configure:35351: checking whether __attribute__((format)) allowed configure:35368: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35368: $? = 0 configure:35375: result: yes configure:35385: checking if C compiler supports __builtin_expect configure:35401: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35401: $? = 0 configure:35404: result: yes configure:35436: checking whether byte ordering is bigendian configure:35451: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:52: error: syntax error before "a" conftest.c:54: error: syntax error before "typedef" configure:35451: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:35496: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35496: $? = 0 configure:35514: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:58: error: `not' undeclared (first use in this function) conftest.c:58: error: (Each undeclared identifier is reported only once conftest.c:58: error: for each function it appears in.) conftest.c:58: error: syntax error before "big" configure:35514: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:35642: result: no configure:35680: checking whether C compiler allows unaligned doubles configure:35713: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35713: $? = 0 configure:35713: ./conftest configure:35713: $? = 0 configure:35723: result: yes configure:35742: checking whether gcc supports __func__ configure:35758: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35758: $? = 0 configure:35765: result: yes configure:35802: checking whether long double is supported configure:35819: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35819: $? = 0 configure:35826: result: yes configure:35835: checking whether long long is supported configure:35852: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35852: $? = 0 configure:35859: result: yes configure:35870: checking for max C struct integer alignment configure:35988: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:35988: $? = 0 configure:35988: ./conftest configure:35988: $? = 0 configure:36000: result: four configure:36031: checking for max C struct floating point alignment configure:36133: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36133: $? = 0 configure:36133: ./conftest configure:36133: $? = 0 configure:36145: result: four configure:36178: checking for max C struct alignment of structs with doubles configure:36249: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36249: $? = 0 configure:36249: ./conftest configure:36249: $? = 0 configure:36261: result: four configure:36268: checking for max C struct floating point alignment with long doubles configure:36340: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36340: $? = 0 configure:36340: ./conftest configure:36340: $? = 0 configure:36352: result: four configure:36397: checking if alignment of structs with doubles is based on position configure:36431: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36431: $? = 0 configure:36431: ./conftest configure:36431: $? = 0 configure:36443: result: no configure:36459: checking if alignment of structs with long long ints is based on position configure:36495: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36495: $? = 0 configure:36495: ./conftest configure:36495: $? = 0 configure:36507: result: no configure:36523: checking if double alignment breaks rules, find actual alignment configure:36570: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36570: $? = 0 configure:36570: ./conftest configure:36570: $? = 0 configure:36582: result: no configure:36598: checking for alignment restrictions on pointers configure:36618: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36618: $? = 0 configure:36618: ./conftest configure:36618: $? = 0 configure:36635: result: int or better configure:36647: checking size of char configure:36652: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36652: $? = 0 configure:36652: ./conftest configure:36652: $? = 0 configure:36666: result: 1 configure:36680: checking size of unsigned char configure:36685: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36685: $? = 0 configure:36685: ./conftest configure:36685: $? = 0 configure:36699: result: 1 configure:36713: checking size of short configure:36718: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36718: $? = 0 configure:36718: ./conftest configure:36718: $? = 0 configure:36732: result: 2 configure:36746: checking size of unsigned short configure:36751: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36751: $? = 0 configure:36751: ./conftest configure:36751: $? = 0 configure:36765: result: 2 configure:36779: checking size of int configure:36784: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36784: $? = 0 configure:36784: ./conftest configure:36784: $? = 0 configure:36798: result: 4 configure:36812: checking size of unsigned int configure:36817: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36817: $? = 0 configure:36817: ./conftest configure:36817: $? = 0 configure:36831: result: 4 configure:36845: checking size of long configure:36850: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36850: $? = 0 configure:36850: ./conftest configure:36850: $? = 0 configure:36864: result: 4 configure:36878: checking size of unsigned long configure:36883: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36883: $? = 0 configure:36883: ./conftest configure:36883: $? = 0 configure:36897: result: 4 configure:36911: checking size of long long configure:36916: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36916: $? = 0 configure:36916: ./conftest configure:36916: $? = 0 configure:36930: result: 8 configure:36944: checking size of unsigned long long configure:36949: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36949: $? = 0 configure:36949: ./conftest configure:36949: $? = 0 configure:36963: result: 8 configure:36977: checking size of float configure:36982: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:36982: $? = 0 configure:36982: ./conftest configure:36982: $? = 0 configure:36996: result: 4 configure:37010: checking size of double configure:37015: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37015: $? = 0 configure:37015: ./conftest configure:37015: $? = 0 configure:37029: result: 8 configure:37043: checking size of long double configure:37048: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37048: $? = 0 configure:37048: ./conftest configure:37048: $? = 0 configure:37062: result: 12 configure:37076: checking size of void * configure:37081: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37081: $? = 0 configure:37081: ./conftest configure:37081: $? = 0 configure:37095: result: 4 configure:37106: checking for ANSI C header files configure:37210: result: yes configure:37220: checking stddef.h usability configure:37220: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37220: $? = 0 configure:37220: result: yes configure:37220: checking stddef.h presence configure:37220: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:37220: $? = 0 configure:37220: result: yes configure:37220: checking for stddef.h configure:37220: result: yes configure:37234: checking size of wchar_t configure:37239: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37239: $? = 0 configure:37239: ./conftest configure:37239: $? = 0 configure:37258: result: 4 configure:37273: checking size of float_int configure:37278: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37278: $? = 0 configure:37278: ./conftest configure:37278: $? = 0 configure:37293: result: 8 configure:37307: checking size of double_int configure:37312: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37312: $? = 0 configure:37312: ./conftest configure:37312: $? = 0 configure:37327: result: 12 configure:37341: checking size of long_int configure:37346: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37346: $? = 0 configure:37346: ./conftest configure:37346: $? = 0 configure:37361: result: 8 configure:37375: checking size of short_int configure:37380: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37380: $? = 0 configure:37380: ./conftest configure:37380: $? = 0 configure:37395: result: 8 configure:37409: checking size of two_int configure:37414: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37414: $? = 0 configure:37414: ./conftest configure:37414: $? = 0 configure:37429: result: 8 configure:37443: checking size of long_double_int configure:37448: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37448: $? = 0 configure:37448: ./conftest configure:37448: $? = 0 configure:37463: result: 16 configure:37476: checking sys/bitypes.h usability configure:37476: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37476: $? = 0 configure:37476: result: yes configure:37476: checking sys/bitypes.h presence configure:37476: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:37476: $? = 0 configure:37476: result: yes configure:37476: checking for sys/bitypes.h configure:37476: result: yes configure:37489: checking for inttypes.h configure:37489: result: yes configure:37489: checking for stdint.h configure:37489: result: yes configure:37501: checking for int8_t configure:37501: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37501: $? = 0 configure:37501: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:121: error: size of array `test_array' is negative configure:37501: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 8 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int8_t) (((((int8_t) 1 << N) << N) - 1) * 2 + 1) | < (int8_t) (((((int8_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:37501: result: yes configure:37512: checking for int16_t configure:37512: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37512: $? = 0 configure:37512: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:121: error: size of array `test_array' is negative configure:37512: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 16 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int16_t) (((((int16_t) 1 << N) << N) - 1) * 2 + 1) | < (int16_t) (((((int16_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:37512: result: yes configure:37523: checking for int32_t configure:37523: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37523: $? = 0 configure:37523: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:121: warning: integer overflow in expression conftest.c:121: error: size of array `test_array' is negative configure:37523: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 32 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 1) | < (int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:37523: result: yes configure:37534: checking for int64_t configure:37534: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37534: $? = 0 configure:37534: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:121: warning: integer overflow in expression conftest.c:121: error: size of array `test_array' is negative configure:37534: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 64 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 1) | < (int64_t) (((((int64_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:37534: result: yes configure:37575: checking for uint8_t configure:37575: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37575: $? = 0 configure:37575: result: yes configure:37589: checking for uint16_t configure:37589: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37589: $? = 0 configure:37589: result: yes configure:37601: checking for uint32_t configure:37601: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37601: $? = 0 configure:37601: result: yes configure:37615: checking for uint64_t configure:37615: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37615: $? = 0 configure:37615: result: yes configure:37657: checking stdbool.h usability configure:37657: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37657: $? = 0 configure:37657: result: yes configure:37657: checking stdbool.h presence configure:37657: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:37657: $? = 0 configure:37657: result: yes configure:37657: checking for stdbool.h configure:37657: result: yes configure:37657: checking complex.h usability configure:37657: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37657: $? = 0 configure:37657: result: yes configure:37657: checking complex.h presence configure:37657: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:37657: $? = 0 configure:37657: result: yes configure:37657: checking for complex.h configure:37657: result: yes configure:37671: checking size of _Bool configure:37676: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37676: $? = 0 configure:37676: ./conftest configure:37676: $? = 0 configure:37695: result: 1 configure:37709: checking size of float _Complex configure:37714: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37714: $? = 0 configure:37714: ./conftest configure:37714: $? = 0 configure:37733: result: 8 configure:37747: checking size of double _Complex configure:37752: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37752: $? = 0 configure:37752: ./conftest configure:37752: $? = 0 configure:37771: result: 16 configure:37787: checking size of long double _Complex configure:37792: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37792: $? = 0 configure:37792: ./conftest configure:37792: $? = 0 configure:37811: result: 24 configure:37826: checking for _Bool configure:37826: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37826: $? = 0 configure:37826: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:133: error: syntax error before ')' token configure:37826: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:37826: result: yes configure:37835: checking for float _Complex configure:37835: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37835: $? = 0 configure:37835: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:134: error: syntax error before ')' token configure:37835: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((float _Complex))) | return 0; | ; | return 0; | } configure:37835: result: yes configure:37844: checking for double _Complex configure:37844: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37844: $? = 0 configure:37844: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:135: error: syntax error before ')' token configure:37844: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((double _Complex))) | return 0; | ; | return 0; | } configure:37844: result: yes configure:37857: checking for long double _Complex configure:37857: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:37857: $? = 0 configure:37857: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:136: error: syntax error before ')' token configure:37857: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((long double _Complex))) | return 0; | ; | return 0; | } configure:37857: result: yes configure:38277: checking for size of Fortran type integer configure:38318: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:38318: $? = 0 configure:38322: mv conftest.o pac_conftest.o configure:38325: $? = 0 configure:38352: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:38352: $? = 0 configure:38352: ./conftest configure:38352: $? = 0 configure:38390: result: 4 configure:38405: checking for size of Fortran type real configure:38446: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:38446: $? = 0 configure:38450: mv conftest.o pac_conftest.o configure:38453: $? = 0 configure:38480: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:38480: $? = 0 configure:38480: ./conftest configure:38480: $? = 0 configure:38518: result: 4 configure:38533: checking for size of Fortran type double precision configure:38574: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:38574: $? = 0 configure:38578: mv conftest.o pac_conftest.o configure:38581: $? = 0 configure:38608: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:38608: $? = 0 configure:38608: ./conftest configure:38608: $? = 0 configure:38646: result: 8 configure:38669: checking whether integer*1 is supported configure:38680: pgf90 -c conftest.f >&5 configure:38680: $? = 0 configure:38687: result: yes configure:38689: checking whether integer*2 is supported configure:38700: pgf90 -c conftest.f >&5 configure:38700: $? = 0 configure:38707: result: yes configure:38709: checking whether integer*4 is supported configure:38720: pgf90 -c conftest.f >&5 configure:38720: $? = 0 configure:38727: result: yes configure:38729: checking whether integer*8 is supported configure:38740: pgf90 -c conftest.f >&5 configure:38740: $? = 0 configure:38747: result: yes configure:38749: checking whether integer*16 is supported configure:38760: pgf90 -c conftest.f >&5 PGF90-W-0031-Illegal data type length specifier for integer (conftest.f: 2) PGF90-W-0031-Illegal data type length specifier for i (conftest.f: 2) 0 inform, 2 warnings, 0 severes, 0 fatal for main configure:38760: $? = 0 configure:38767: result: yes configure:38769: checking whether real*4 is supported configure:38780: pgf90 -c conftest.f >&5 configure:38780: $? = 0 configure:38787: result: yes configure:38789: checking whether real*8 is supported configure:38800: pgf90 -c conftest.f >&5 configure:38800: $? = 0 configure:38807: result: yes configure:38809: checking whether real*16 is supported configure:38820: pgf90 -c conftest.f >&5 PGF90-W-0031-Illegal data type length specifier for real (conftest.f: 2) PGF90-W-0031-Illegal data type length specifier for a (conftest.f: 2) 0 inform, 2 warnings, 0 severes, 0 fatal for main configure:38820: $? = 0 configure:38827: result: yes configure:38926: checking for C type matching Fortran real configure:38934: result: float configure:38949: checking for C type matching Fortran double configure:38956: result: double configure:39285: checking for C type matching Fortran integer configure:39292: result: int configure:39445: checking for values of Fortran logicals configure:39484: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:39484: $? = 0 configure:39487: mv conftest.o pac_conftest.o configure:39490: $? = 0 configure:39522: pgf90 -o conftest conftest.f pac_conftest.o >&5 conftest.f: configure:39522: $? = 0 configure:39522: ./conftest configure:39522: $? = 0 configure:39560: result: True is -1 and False is 0 configure:39671: checking for Fortran 90 integer kind for 4-byte integers configure:39711: pgf90 -o conftest conftest.f90 >&5 configure:39711: $? = 0 configure:39711: ./conftest FORTRAN STOP configure:39711: $? = 0 configure:39728: result: 4 configure:39756: checking for Fortran 90 integer kind for 8-byte integers configure:39796: pgf90 -o conftest conftest.f90 >&5 configure:39796: $? = 0 configure:39796: ./conftest FORTRAN STOP configure:39796: $? = 0 configure:39813: result: 8 configure:39840: checking for Fortran 90 integer kind for 4-byte integers configure:39854: result: 4 (cached) configure:39930: checking if real*8 is supported in Fortran 90 configure:39943: pgf90 -c conftest.f90 >&5 configure:39943: $? = 0 configure:39955: result: yes configure:40402: checking for alignment restrictions on int64_t configure:40436: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40436: $? = 0 configure:40436: ./conftest configure:40436: $? = 0 configure:40447: result: no configure:40466: checking for alignment restrictions on int32_t configure:40500: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40500: $? = 0 configure:40500: ./conftest configure:40500: $? = 0 configure:40511: result: no configure:40524: checking for gcc __asm__ and pentium cmpxchgl instruction configure:40548: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40548: $? = 0 configure:40548: ./conftest configure:40548: $? = 0 configure:40549: result: yes configure:40572: checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction configure:40596: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 /tmp/ccEjHqlh.s: Assembler messages: /tmp/ccEjHqlh.s:17: Error: suffix or operands invalid for `cmpxchg' configure:40596: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | /* end confdefs.h. */ | | int main(int argc, char *argv[]) | { | long int compval = 10; | volatile long int *p = &compval; | long int oldval = 10; | long int newval = 20; | char ret; | long int readval; | __asm__ __volatile__ ("lock; cmpxchgq %3, %1; sete %0" | : "=q" (ret), "=m" (*p), "=a" (readval) | : "r" (newval), "m" (*p), "a" (oldval) : "memory"); | return (compval == 20) ? 0 : -1; | } | configure:40603: result: no configure:40612: checking for gcc __asm__ and IA64 xchg4 instruction configure:40637: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 /tmp/ccGotZPn.s: Assembler messages: /tmp/ccGotZPn.s:12: Error: no such instruction: `xchg4 %eax=[%eax],%edx' configure:40637: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | /* end confdefs.h. */ | | unsigned long _InterlockedExchange(volatile void *ptr, unsigned long x) | { | unsigned long result; | __asm__ __volatile ("xchg4 %0=[%1],%2" : "=r" (result) | : "r" (ptr), "r" (x) : "memory"); | return result; | } | int main(int argc, char *argv[]) | { | long val = 1; | volatile long *p = &val; | long oldval = _InterlockedExchange(p, (unsigned long)2); | return (oldval == 1 && val == 2) ? 0 : -1; | } | configure:40644: result: no configure:40662: checking for gcov configure:40678: found /usr/bin/gcov configure:40689: result: gcov configure:40811: checking for ANSI C header files configure:40915: result: yes configure:40930: checking for stdlib.h configure:40930: result: yes configure:40930: checking stdarg.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking stdarg.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for stdarg.h configure:40930: result: yes configure:40930: checking for sys/types.h configure:40930: result: yes configure:40930: checking for string.h configure:40930: result: yes configure:40930: checking for inttypes.h configure:40930: result: yes configure:40930: checking limits.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking limits.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for limits.h configure:40930: result: yes configure:40930: checking for stddef.h configure:40930: result: yes configure:40930: checking errno.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking errno.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for errno.h configure:40930: result: yes configure:40930: checking sys/socket.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking sys/socket.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for sys/socket.h configure:40930: result: yes configure:40930: checking sys/time.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking sys/time.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for sys/time.h configure:40930: result: yes configure:40930: checking for unistd.h configure:40930: result: yes configure:40930: checking endian.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking endian.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for endian.h configure:40930: result: yes configure:40930: checking assert.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking assert.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for assert.h configure:40930: result: yes configure:40930: checking sys/param.h usability configure:40930: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking sys/param.h presence configure:40930: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:40930: $? = 0 configure:40930: result: yes configure:40930: checking for sys/param.h configure:40930: result: yes configure:40940: checking for sys/uio.h configure:40960: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40960: $? = 0 configure:40967: result: yes configure:40976: checking for size_t configure:40976: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40976: $? = 0 configure:40976: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:172: error: syntax error before ')' token configure:40976: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:40976: result: yes configure:40992: checking for setitimer configure:40992: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40992: $? = 0 configure:40992: result: yes configure:40992: checking for alarm configure:40992: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:40992: $? = 0 configure:40992: result: yes configure:41005: checking for vsnprintf configure:41005: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:161: warning: conflicting types for built-in function 'vsnprintf' configure:41005: $? = 0 configure:41005: result: yes configure:41005: checking for vsprintf configure:41005: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:162: warning: conflicting types for built-in function 'vsprintf' configure:41005: $? = 0 configure:41005: result: yes configure:41017: checking whether vsnprintf needs a declaration configure:41036: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41036: $? = 0 configure:41043: result: no configure:41060: checking for strerror configure:41060: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41060: $? = 0 configure:41060: result: yes configure:41060: checking for strncasecmp configure:41060: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41060: $? = 0 configure:41060: result: yes configure:41069: checking whether strerror_r is declared configure:41069: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41069: $? = 0 configure:41069: result: yes configure:41082: checking for strerror_r configure:41082: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41082: $? = 0 configure:41082: result: yes configure:41091: checking whether strerror_r returns char * configure:41115: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41115: $? = 0 configure:41153: result: yes configure:41163: checking whether strerror_r needs a declaration configure:41181: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41181: $? = 0 configure:41188: result: no configure:41204: checking for snprintf configure:41204: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:168: warning: conflicting types for built-in function 'snprintf' configure:41204: $? = 0 configure:41204: result: yes configure:41215: checking whether snprintf needs a declaration configure:41233: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41233: $? = 0 configure:41240: result: no configure:41256: checking for qsort configure:41256: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41256: $? = 0 configure:41256: result: yes configure:41272: checking for va_copy configure:41298: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41298: $? = 0 configure:41306: result: yes configure:41358: checking for variable argument list macro functionality configure:41374: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41374: $? = 0 configure:41378: result: yes configure:41391: checking for working alloca.h configure:41408: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41408: $? = 0 configure:41416: result: yes configure:41424: checking for alloca configure:41461: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41461: $? = 0 configure:41469: result: yes configure:41593: checking for strdup configure:41593: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:174: warning: conflicting types for built-in function 'strdup' configure:41593: $? = 0 configure:41593: result: yes configure:41605: checking whether strdup needs a declaration configure:41623: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41623: $? = 0 configure:41630: result: no configure:41716: checking for mkstemp configure:41716: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41716: $? = 0 configure:41716: result: yes configure:41727: checking whether mkstemp needs a declaration configure:41745: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41745: $? = 0 configure:41752: result: no configure:41767: checking for fdopen configure:41767: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41767: $? = 0 configure:41767: result: yes configure:41778: checking whether fdopen needs a declaration configure:41796: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:155: error: `fdopen' undeclared here (not in a function) configure:41796: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | /* end confdefs.h. */ | #include | void (*fptr)(void) = (void(*)(void))fdopen; | int | main () | { | | ; | return 0; | } configure:41803: result: yes configure:41818: checking for putenv configure:41818: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41818: $? = 0 configure:41818: result: yes configure:41829: checking whether putenv needs a declaration configure:41847: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41847: $? = 0 configure:41854: result: no configure:41907: checking for clock_gettime configure:41907: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 /tmp/ccG3yl79.o(.text+0xd): In function `main': : undefined reference to `clock_gettime' collect2: ld returned 1 exit status configure:41907: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | /* end confdefs.h. */ | /* Define clock_gettime to an innocuous variant, in case declares clock_gettime. | For example, HP-UX 11i declares gettimeofday. */ | #define clock_gettime innocuous_clock_gettime | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char clock_gettime (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef clock_gettime | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char clock_gettime (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_clock_gettime || defined __stub___clock_gettime | choke me | #endif | | int | main () | { | return clock_gettime (); | ; | return 0; | } configure:41907: result: no configure:41907: checking for clock_getres configure:41907: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 /tmp/ccYGp3Am.o(.text+0xd): In function `main': : undefined reference to `clock_getres' collect2: ld returned 1 exit status configure:41907: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | /* end confdefs.h. */ | /* Define clock_getres to an innocuous variant, in case declares clock_getres. | For example, HP-UX 11i declares gettimeofday. */ | #define clock_getres innocuous_clock_getres | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char clock_getres (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef clock_getres | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char clock_getres (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_clock_getres || defined __stub___clock_getres | choke me | #endif | | int | main () | { | return clock_getres (); | ; | return 0; | } configure:41907: result: no configure:41907: checking for gethrtime configure:41907: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 /tmp/ccCckcKm.o(.text+0xd): In function `main': : undefined reference to `gethrtime' collect2: ld returned 1 exit status configure:41907: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | /* end confdefs.h. */ | /* Define gethrtime to an innocuous variant, in case declares gethrtime. | For example, HP-UX 11i declares gettimeofday. */ | #define gethrtime innocuous_gethrtime | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char gethrtime (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef gethrtime | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char gethrtime (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_gethrtime || defined __stub___gethrtime | choke me | #endif | | int | main () | { | return gethrtime (); | ; | return 0; | } configure:41907: result: no configure:41907: checking for mach_absolute_time configure:41907: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 /tmp/ccm29x0A.o(.text+0xd): In function `main': : undefined reference to `mach_absolute_time' collect2: ld returned 1 exit status configure:41907: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | /* end confdefs.h. */ | /* Define mach_absolute_time to an innocuous variant, in case declares mach_absolute_time. | For example, HP-UX 11i declares gettimeofday. */ | #define mach_absolute_time innocuous_mach_absolute_time | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char mach_absolute_time (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef mach_absolute_time | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char mach_absolute_time (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_mach_absolute_time || defined __stub___mach_absolute_time | choke me | #endif | | int | main () | { | return mach_absolute_time (); | ; | return 0; | } configure:41907: result: no configure:41907: checking for gettimeofday configure:41907: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:41907: $? = 0 configure:41907: result: yes configure:42766: checking size of MPIR_Bsend_data_t configure:42771: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:42771: $? = 0 configure:42771: ./conftest configure:42771: $? = 0 configure:42796: result: 56 configure:42862: checking pthread.h usability configure:42862: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:42862: $? = 0 configure:42862: result: yes configure:42862: checking pthread.h presence configure:42862: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:42862: $? = 0 configure:42862: result: yes configure:42862: checking for pthread.h configure:42862: result: yes configure:42880: checking for pthread_key_create in -lpthread configure:42905: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:42905: $? = 0 configure:42914: result: yes LIBS(=' ') does not contain '-lpthread', prepending EXTERNAL_LIBS(='') does not contain '-lpthread', prepending configure:42945: checking for pthread_yield configure:42945: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:42945: $? = 0 configure:42945: result: yes configure:42956: checking for pthread_key_create configure:42956: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:42956: $? = 0 configure:42956: result: yes configure:42975: checking for pthread_cleanup_push configure:42975: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/ccELtMwf.o(.text+0xd): In function `main': : undefined reference to `pthread_cleanup_push' collect2: ld returned 1 exit status configure:42975: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | /* end confdefs.h. */ | /* Define pthread_cleanup_push to an innocuous variant, in case declares pthread_cleanup_push. | For example, HP-UX 11i declares gettimeofday. */ | #define pthread_cleanup_push innocuous_pthread_cleanup_push | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char pthread_cleanup_push (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef pthread_cleanup_push | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char pthread_cleanup_push (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_pthread_cleanup_push || defined __stub___pthread_cleanup_push | choke me | #endif | | int | main () | { | return pthread_cleanup_push (); | ; | return 0; | } configure:42975: result: no configure:42985: checking whether pthread_cleanup_push is available (may be a macro in pthread.h) configure:43004: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 conftest.c: In function `main': conftest.c:176: error: syntax error at end of input configure:43004: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | /* end confdefs.h. */ | | #include | void f1(void *a) { return; } | int | main () | { | pthread_cleanup_push( f1, (void *)0 ); | ; | return 0; | } configure:43012: result: no configure:43022: checking whether pthread.h defines PTHREAD_MUTEX_RECURSIVE_NP configure:43039: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:43039: $? = 0 configure:43046: result: yes configure:43048: checking whether pthread.h defines PTHREAD_MUTEX_RECURSIVE configure:43065: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:171: error: `PTHREAD_MUTEX_RECURSIVE' undeclared (first use in this function) conftest.c:171: error: (Each undeclared identifier is reported only once conftest.c:171: error: for each function it appears in.) configure:43065: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | /* end confdefs.h. */ | #include | int | main () | { | int a=PTHREAD_MUTEX_RECURSIVE; | ; | return 0; | } configure:43072: result: no configure:43086: checking whether pthread.h defines PTHREAD_MUTEX_ERRORCHECK_NP configure:43103: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:43103: $? = 0 configure:43110: result: yes configure:43112: checking whether pthread.h defines PTHREAD_MUTEX_ERRORCHECK configure:43129: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:172: error: `PTHREAD_MUTEX_ERRORCHECK' undeclared (first use in this function) conftest.c:172: error: (Each undeclared identifier is reported only once conftest.c:172: error: for each function it appears in.) configure:43129: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | /* end confdefs.h. */ | #include | int | main () | { | int a=PTHREAD_MUTEX_ERRORCHECK; | ; | return 0; | } configure:43136: result: no configure:43150: checking whether pthread_mutexattr_settype needs a declaration configure:43168: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:170: error: `pthread_mutexattr_settype' undeclared here (not in a function) configure:43168: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | /* end confdefs.h. */ | #include | void (*fptr)(void) = (void(*)(void))pthread_mutexattr_settype; | int | main () | { | | ; | return 0; | } configure:43175: result: yes configure:43301: checking for thread local storage specifier configure:43328: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43328: $? = 0 configure:43351: result: __thread configure:43357: checking for getpid configure:43357: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43357: $? = 0 configure:43357: result: yes configure:43377: checking sched.h usability configure:43377: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:43377: $? = 0 configure:43377: result: yes configure:43377: checking sched.h presence configure:43377: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:43377: $? = 0 configure:43377: result: yes configure:43377: checking for sched.h configure:43377: result: yes configure:43389: checking for unistd.h configure:43389: result: yes configure:43401: checking sys/select.h usability configure:43401: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:43401: $? = 0 configure:43401: result: yes configure:43401: checking sys/select.h presence configure:43401: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:43401: $? = 0 configure:43401: result: yes configure:43401: checking for sys/select.h configure:43401: result: yes configure:43414: checking for sched_yield configure:43414: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43414: $? = 0 configure:43414: result: yes configure:43414: checking for yield configure:43414: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/ccizhd4g.o(.text+0xd): In function `main': : undefined reference to `yield' collect2: ld returned 1 exit status configure:43414: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | /* end confdefs.h. */ | /* Define yield to an innocuous variant, in case declares yield. | For example, HP-UX 11i declares gettimeofday. */ | #define yield innocuous_yield | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char yield (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef yield | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char yield (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_yield || defined __stub___yield | choke me | #endif | | int | main () | { | return yield (); | ; | return 0; | } configure:43414: result: no configure:43414: checking for usleep configure:43414: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43414: $? = 0 configure:43414: result: yes configure:43414: checking for sleep configure:43414: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43414: $? = 0 configure:43414: result: yes configure:43414: checking for select configure:43414: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43414: $? = 0 configure:43414: result: yes configure:43426: checking whether usleep needs a declaration configure:43444: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:43444: $? = 0 configure:43451: result: no configure:43563: checking for sched_setaffinity configure:43563: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43563: $? = 0 configure:43563: result: yes configure:43563: checking for sched_getaffinity configure:43563: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:43563: $? = 0 configure:43563: result: yes configure:43563: checking for bindprocessor configure:43563: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/ccQnQ47o.o(.text+0xd): In function `main': : undefined reference to `bindprocessor' collect2: ld returned 1 exit status configure:43563: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | /* end confdefs.h. */ | /* Define bindprocessor to an innocuous variant, in case declares bindprocessor. | For example, HP-UX 11i declares gettimeofday. */ | #define bindprocessor innocuous_bindprocessor | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char bindprocessor (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef bindprocessor | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char bindprocessor (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_bindprocessor || defined __stub___bindprocessor | choke me | #endif | | int | main () | { | return bindprocessor (); | ; | return 0; | } configure:43563: result: no configure:43563: checking for thread_policy_set configure:43563: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/ccmyQFoB.o(.text+0xd): In function `main': : undefined reference to `thread_policy_set' collect2: ld returned 1 exit status configure:43563: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | /* end confdefs.h. */ | /* Define thread_policy_set to an innocuous variant, in case declares thread_policy_set. | For example, HP-UX 11i declares gettimeofday. */ | #define thread_policy_set innocuous_thread_policy_set | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char thread_policy_set (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef thread_policy_set | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char thread_policy_set (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_thread_policy_set || defined __stub___thread_policy_set | choke me | #endif | | int | main () | { | return thread_policy_set (); | ; | return 0; | } configure:43563: result: no configure:43574: checking whether cpu_set_t available configure:43592: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:43592: $? = 0 configure:43599: result: yes configure:43606: checking whether the CPU_SET and CPU_ZERO macros are defined configure:43624: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/ccIExvyY.o(.text+0x18): In function `main': : undefined reference to `CPU_ZERO' /tmp/ccIExvyY.o(.text+0x22): In function `main': : undefined reference to `CPU_SET' collect2: ld returned 1 exit status configure:43624: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | /* end confdefs.h. */ | | #include | int | main () | { | cpu_set_t t; CPU_ZERO(&t); CPU_SET(1,&t); | ; | return 0; | } configure:43632: result: no configure:45267: RUNNING CONFIGURE FOR F90 CODE configure:45270: checking whether ln -s works configure:45274: result: yes configure:45284: checking for extension for Fortran 90 programs configure:45299: pgf90 -c conftest.f90 >&5 configure:45299: $? = 0 configure:45301: result: f90 configure:45346: checking for the precision and range of reals configure:45373: pgf90 -o conftest conftest.f90 -lpthread >&5 configure:45373: $? = 0 configure:45373: ./conftest configure:45373: $? = 0 configure:45377: result: 6 , 37 configure:45411: checking for the precision and range of double precision configure:45438: pgf90 -o conftest conftest.f90 -lpthread >&5 configure:45438: $? = 0 configure:45438: ./conftest configure:45438: $? = 0 configure:45442: result: 15 , 307 configure:45476: checking for the range of integer configure:45503: pgf90 -o conftest conftest.f90 -lpthread >&5 configure:45503: $? = 0 configure:45503: ./conftest configure:45503: $? = 0 configure:45507: result: 9 configure:45542: checking for available integer kinds configure:45583: pgf90 -o conftest conftest.f90 -lpthread >&5 configure:45583: $? = 0 configure:45583: ./conftest configure:45583: $? = 0 configure:45587: result: 2 , 1, 4 , 2, 9 , 4, 18 , 8, configure:45622: checking for available integer ranges configure:45651: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:45651: $? = 0 configure:45654: mv conftest.o pac_conftest.o configure:45657: $? = 0 configure:45707: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread >&5 conftest.f90: configure:45707: $? = 0 configure:45707: ./conftest configure:45707: $? = 0 configure:45707: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread >&5 conftest.f90: configure:45707: $? = 0 configure:45707: ./conftest configure:45707: $? = 0 configure:45707: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread >&5 conftest.f90: configure:45707: $? = 0 configure:45707: ./conftest configure:45707: $? = 0 configure:45707: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread >&5 conftest.f90: configure:45707: $? = 0 configure:45707: ./conftest configure:45707: $? = 0 configure:45731: result: { 2 , 1 , 1 }, { 4 , 2 , 2 }, { 9 , 4 , 4 }, { 18 , 8 , 8 }, configure:48237: checking for unistd.h configure:48237: result: yes configure:48237: checking for string.h configure:48237: result: yes configure:48237: checking for stdlib.h configure:48237: result: yes configure:48237: checking for sys/socket.h configure:48237: result: yes configure:48237: checking for strings.h configure:48237: result: yes configure:48237: checking for assert.h configure:48237: result: yes configure:48237: checking arpa/inet.h usability configure:48237: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48237: $? = 0 configure:48237: result: yes configure:48237: checking arpa/inet.h presence configure:48237: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48237: $? = 0 configure:48237: result: yes configure:48237: checking for arpa/inet.h configure:48237: result: yes configure:48249: checking for snprintf configure:48249: result: yes configure:48260: checking whether snprintf needs a declaration configure:48285: result: no configure:48299: checking for strncasecmp configure:48299: result: yes configure:48332: checking for sys/types.h configure:48332: result: yes configure:48332: checking for sys/param.h configure:48332: result: yes configure:48332: checking for sys/socket.h configure:48332: result: yes configure:48332: checking netinet/in.h usability configure:48332: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking netinet/in.h presence configure:48332: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking for netinet/in.h configure:48332: result: yes configure:48332: checking netinet/tcp.h usability configure:48332: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking netinet/tcp.h presence configure:48332: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking for netinet/tcp.h configure:48332: result: yes configure:48332: checking sys/un.h usability configure:48332: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking sys/un.h presence configure:48332: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking for sys/un.h configure:48332: result: yes configure:48332: checking netdb.h usability configure:48332: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking netdb.h presence configure:48332: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48332: $? = 0 configure:48332: result: yes configure:48332: checking for netdb.h configure:48332: result: yes configure:48344: checking for library containing socket configure:48375: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48375: $? = 0 configure:48392: result: none required configure:48400: checking for library containing gethostbyname configure:48431: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48431: $? = 0 configure:48448: result: none required configure:48460: checking for socket configure:48460: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48460: $? = 0 configure:48460: result: yes configure:48460: checking for setsockopt configure:48460: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48460: $? = 0 configure:48460: result: yes configure:48460: checking for gethostbyname configure:48460: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48460: $? = 0 configure:48460: result: yes configure:48483: checking whether socklen_t is defined (in sys/socket.h if present) configure:48506: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:210: error: conflicting types for 'socklen_t' /usr/include/bits/socket.h:36: error: previous declaration of 'socklen_t' was here configure:48506: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | /* end confdefs.h. */ | | #include | #ifdef HAVE_SYS_SOCKET_H | #include | #endif | | typedef struct { double a; int b; } socklen_t; | int | main () | { | socklen_t a;a.a=1.0; | ; | return 0; | } configure:48513: result: yes configure:48521: checking whether struct hostent contains h_addr_list configure:48539: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48539: $? = 0 configure:48546: result: yes configure:48556: checking whether __attribute__ allowed configure:48580: result: yes configure:48582: checking whether __attribute__((format)) allowed configure:48606: result: yes configure:48624: RUNNING CONFIGURE FOR CH3 DEVICE configure:48859: checking for assert.h configure:48859: result: yes configure:48859: checking for limits.h configure:48859: result: yes configure:48859: checking for string.h configure:48859: result: yes configure:48859: checking for sys/types.h configure:48859: result: yes configure:48859: checking for sys/uio.h configure:48859: result: yes configure:48859: checking uuid/uuid.h usability configure:48859: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48859: $? = 0 configure:48859: result: yes configure:48859: checking uuid/uuid.h presence configure:48859: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48859: $? = 0 configure:48859: result: yes configure:48859: checking for uuid/uuid.h configure:48859: result: yes configure:48859: checking time.h usability configure:48859: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48859: $? = 0 configure:48859: result: yes configure:48859: checking time.h presence configure:48859: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48859: $? = 0 configure:48859: result: yes configure:48859: checking for time.h configure:48859: result: yes configure:48859: checking ctype.h usability configure:48859: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48859: $? = 0 configure:48859: result: yes configure:48859: checking ctype.h presence configure:48859: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:48859: $? = 0 configure:48859: result: yes configure:48859: checking for ctype.h configure:48859: result: yes configure:48859: checking for unistd.h configure:48859: result: yes configure:48859: checking for arpa/inet.h configure:48859: result: yes configure:48859: checking for sys/socket.h configure:48859: result: yes configure:48875: checking for net/if.h configure:48875: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48875: $? = 0 configure:48875: result: yes configure:48900: checking for pid_t configure:48900: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48900: $? = 0 configure:48900: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c: In function `main': conftest.c:255: error: syntax error before ')' token configure:48900: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:48900: result: yes configure:48915: checking for inet_pton configure:48915: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48915: $? = 0 configure:48915: result: yes configure:48926: checking for gethostname configure:48926: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48926: $? = 0 configure:48926: result: yes configure:48938: checking whether gethostname needs a declaration configure:48956: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:48956: $? = 0 configure:48963: result: no configure:48979: checking for CFUUIDCreate configure:48979: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/cc02tuOd.o(.text+0xd): In function `main': : undefined reference to `CFUUIDCreate' collect2: ld returned 1 exit status configure:48979: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | #define HAVE_INET_PTON 1 | #define HAVE_GETHOSTNAME 1 | /* end confdefs.h. */ | /* Define CFUUIDCreate to an innocuous variant, in case declares CFUUIDCreate. | For example, HP-UX 11i declares gettimeofday. */ | #define CFUUIDCreate innocuous_CFUUIDCreate | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char CFUUIDCreate (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef CFUUIDCreate | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char CFUUIDCreate (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_CFUUIDCreate || defined __stub___CFUUIDCreate | choke me | #endif | | int | main () | { | return CFUUIDCreate (); | ; | return 0; | } configure:48979: result: no configure:48979: checking for uuid_generate configure:48979: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 /tmp/ccyiAiIr.o(.text+0xd): In function `main': : undefined reference to `uuid_generate' collect2: ld returned 1 exit status configure:48979: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | #define HAVE_INET_PTON 1 | #define HAVE_GETHOSTNAME 1 | /* end confdefs.h. */ | /* Define uuid_generate to an innocuous variant, in case declares uuid_generate. | For example, HP-UX 11i declares gettimeofday. */ | #define uuid_generate innocuous_uuid_generate | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char uuid_generate (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef uuid_generate | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char uuid_generate (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_uuid_generate || defined __stub___uuid_generate | choke me | #endif | | int | main () | { | return uuid_generate (); | ; | return 0; | } configure:48979: result: no configure:48979: checking for time configure:48979: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:48979: $? = 0 configure:48979: result: yes configure:48990: checking for OpenPA atomic primitive availability configure:49029: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49029: $? = 0 configure:49048: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:49048: $? = 0 configure:49088: result: yes configure:49099: checking whether byte ordering is bigendian configure:49305: result: no configure:49339: RUNNING CONFIGURE FOR ch3:nemesis configure:49364: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49364: $? = 0 configure:49395: checking for assert.h configure:49395: result: yes configure:49395: checking for netdb.h configure:49395: result: yes configure:49395: checking for unistd.h configure:49395: result: yes configure:49395: checking for sched.h configure:49395: result: yes configure:49395: checking sys/mman.h usability configure:49395: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking sys/mman.h presence configure:49395: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking for sys/mman.h configure:49395: result: yes configure:49395: checking sys/ioctl.h usability configure:49395: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking sys/ioctl.h presence configure:49395: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking for sys/ioctl.h configure:49395: result: yes configure:49395: checking for sys/socket.h configure:49395: result: yes configure:49395: checking sys/sockio.h usability configure:49395: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:263:24: sys/sockio.h: No such file or directory configure:49395: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | #define HAVE_INET_PTON 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_TIME 1 | #define HAVE_NET_IF_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_SOCKET_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:49395: result: no configure:49395: checking sys/sockio.h presence configure:49395: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c conftest.c:230:24: sys/sockio.h: No such file or directory configure:49395: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | #define HAVE_INET_PTON 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_TIME 1 | #define HAVE_NET_IF_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_SOCKET_H 1 | /* end confdefs.h. */ | #include configure:49395: result: no configure:49395: checking for sys/sockio.h configure:49395: result: no configure:49395: checking for sys/types.h configure:49395: result: yes configure:49395: checking for errno.h configure:49395: result: yes configure:49395: checking sys/ipc.h usability configure:49395: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking sys/ipc.h presence configure:49395: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking for sys/ipc.h configure:49395: result: yes configure:49395: checking sys/shm.h usability configure:49395: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking sys/shm.h presence configure:49395: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:49395: $? = 0 configure:49395: result: yes configure:49395: checking for sys/shm.h configure:49395: result: yes configure:49411: checking for netinet/in.h configure:49438: result: yes configure:49457: checking signal.h usability configure:49457: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49457: $? = 0 configure:49457: result: yes configure:49457: checking signal.h presence configure:49457: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:49457: $? = 0 configure:49457: result: yes configure:49457: checking for signal.h configure:49457: result: yes configure:49469: checking for signal configure:49469: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:49469: $? = 0 configure:49469: result: yes configure:49613: checking for mkstemp configure:49613: result: yes configure:49624: checking for rand configure:49624: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:49624: $? = 0 configure:49624: result: yes configure:49635: checking for srand configure:49635: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:49635: $? = 0 configure:49635: result: yes configure:49663: checking for mmap configure:49663: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:49663: $? = 0 configure:49663: result: yes configure:49663: checking for munmap configure:49663: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:49663: $? = 0 configure:49663: result: yes configure:49679: Using a memory-mapped file for shared memory configure:49739: checking whether struct hostent contains h_addr_list configure:49764: result: yes configure:49774: checking whether we can use struct ifconf configure:49797: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49797: $? = 0 configure:49804: result: yes configure:49818: checking whether we can use struct ifreq configure:49841: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:49841: $? = 0 configure:49848: result: yes configure:49877: checking knem_io.h usability configure:49877: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 conftest.c:282:21: knem_io.h: No such file or directory configure:49877: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | #define HAVE_INET_PTON 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_TIME 1 | #define HAVE_NET_IF_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SIGNAL_H 1 | #define HAVE_SIGNAL 1 | #define HAVE_MKSTEMP 1 | #define HAVE_RAND 1 | #define HAVE_SRAND 1 | #define HAVE_MMAP 1 | #define HAVE_MUNMAP 1 | #define USE_MMAP_SHM 1 | #define MPID_NEM_INLINE 1 | #define PREFETCH_CELL 1 | #define USE_FASTBOX 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_STRUCT_IFCONF 1 | #define HAVE_STRUCT_IFREQ 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:49877: result: no configure:49877: checking knem_io.h presence configure:49877: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c conftest.c:249:21: knem_io.h: No such file or directory configure:49877: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "MPICH" | #define PACKAGE_TARNAME "mpich" | #define PACKAGE_VERSION "3.1.3" | #define PACKAGE_STRING "MPICH 3.1.3" | #define PACKAGE_BUGREPORT "discuss@mpich.org" | #define PACKAGE_URL "http://www.mpich.org/" | #define PACKAGE "mpich" | #define VERSION "3.1.3" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_GETPAGESIZE 1 | #define HAVE_GETPAGESIZE 1 | #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL | #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL | #define USE_LOGGING MPID_LOGGING_NONE | #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE | #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL | #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX | #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE | #define HAVE_ROMIO 1 | #define HAVE__FUNC__ /**/ | #define HAVE__FUNCTION__ /**/ | #define HAVE_PRAGMA_WEAK 1 | #define HAVE_WEAK_ATTRIBUTE 1 | #define USE_WEAK_SYMBOLS 1 | #define HAVE_MULTIPLE_PRAGMA_WEAK 1 | #define ENABLE_PVAR_NEM 0 | #define ENABLE_PVAR_RECVQ 0 | #define ENABLE_PVAR_RMA 0 | #define HAVE_LONG_LONG 1 | #define STDCALL | #define F77_NAME_LOWER_USCORE 1 | #define HAVE_FORTRAN_BINDING 1 | #define HAVE_F08_BINDING 1 | #define HAVE_NAMEPUB_SERVICE 1 | #define restrict __restrict | #define HAVE_GCC_ATTRIBUTE 1 | #define HAVE_BUILTIN_EXPECT 1 | #define WORDS_LITTLEENDIAN 1 | #define HAVE_LONG_DOUBLE 1 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_MAX_INTEGER_ALIGNMENT 4 | #define HAVE_MAX_STRUCT_ALIGNMENT 4 | #define HAVE_MAX_FP_ALIGNMENT 4 | #define SIZEOF_CHAR 1 | #define SIZEOF_UNSIGNED_CHAR 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_UNSIGNED_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_LONG 4 | #define SIZEOF_UNSIGNED_LONG 4 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_UNSIGNED_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_LONG_DOUBLE 12 | #define SIZEOF_VOID_P 4 | #define STDC_HEADERS 1 | #define HAVE_STDDEF_H 1 | #define SIZEOF_WCHAR_T 4 | #define SIZEOF_FLOAT_INT 8 | #define SIZEOF_DOUBLE_INT 12 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_SHORT_INT 8 | #define SIZEOF_TWO_INT 8 | #define SIZEOF_LONG_DOUBLE_INT 16 | #define HAVE_SYS_BITYPES_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_INT8_T 1 | #define HAVE_INT16_T 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT8_T 1 | #define HAVE_UINT16_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_COMPLEX_H 1 | #define SIZEOF__BOOL 1 | #define SIZEOF_FLOAT__COMPLEX 8 | #define SIZEOF_DOUBLE__COMPLEX 16 | #define SIZEOF_LONG_DOUBLE__COMPLEX 24 | #define HAVE__BOOL 1 | #define HAVE_FLOAT__COMPLEX 1 | #define HAVE_DOUBLE__COMPLEX 1 | #define HAVE_LONG_DOUBLE__COMPLEX 1 | #define MPIR_REAL4_CTYPE float | #define MPIR_REAL8_CTYPE double | #define MPIR_INTEGER1_CTYPE char | #define MPIR_INTEGER2_CTYPE short | #define MPIR_INTEGER4_CTYPE int | #define MPIR_INTEGER8_CTYPE long long | #define SIZEOF_F77_INTEGER 4 | #define SIZEOF_F77_REAL 4 | #define SIZEOF_F77_DOUBLE_PRECISION 8 | #define MPIR_FC_REAL_CTYPE float | #define MPIR_FC_DOUBLE_CTYPE double | #define HAVE_FINT_IS_INT 1 | #define F77_TRUE_VALUE_SET 1 | #define F77_TRUE_VALUE -1 | #define F77_FALSE_VALUE 0 | #define HAVE_ANY_INT64_T_ALIGNMENT 1 | #define HAVE_ANY_INT32_T_ALIGNMENT 1 | #define HAVE_GCC_AND_PENTIUM_ASM 1 | #define USE_ATOMIC_UPDATES /**/ | #define STDC_HEADERS 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ENDIAN_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_SETITIMER 1 | #define HAVE_ALARM 1 | #define HAVE_VSNPRINTF 1 | #define HAVE_VSPRINTF 1 | #define HAVE_STRERROR 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_DECL_STRERROR_R 1 | #define HAVE_STRERROR_R 1 | #define STRERROR_R_CHAR_P 1 | #define HAVE_SNPRINTF 1 | #define HAVE_QSORT 1 | #define HAVE_VA_COPY 1 | #define HAVE_MACRO_VA_ARGS 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STRDUP 1 | #define HAVE_MKSTEMP 1 | #define HAVE_FDOPEN 1 | #define NEEDS_FDOPEN_DECL 1 | #define HAVE_PUTENV 1 | #define HAVE_GETTIMEOFDAY 1 | #define MPIR_AINT_MAX INT_MAX | #define SIZEOF_INT_IS_AINT 1 | #define MPIR_Pint int | #define MPIR_PINT_FMT_DEC_SPEC "%d" | #define MPIR_Upint unsigned int | #define MPIR_UPINT_FMT_DEC_SPEC "%u" | #define MPIU_SIZE_T unsigned int | #define SIZEOF_MPIR_BSEND_DATA_T 56 | #define HAVE_PTHREAD_H 1 | #define HAVE_PTHREAD_YIELD 1 | #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 | #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP | #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 | #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX | #define MPIU_TLS_SPECIFIER __thread | #define HAVE_GETPID 1 | #define HAVE_SCHED_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_SELECT_H 1 | #define HAVE_SCHED_YIELD 1 | #define HAVE_USLEEP 1 | #define HAVE_SLEEP 1 | #define HAVE_SELECT 1 | #define USE_NOTHING_FOR_YIELD 1 | #define HAVE_SCHED_SETAFFINITY 1 | #define HAVE_SCHED_GETAFFINITY 1 | #define HAVE_CPU_SET_T 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRNCASECMP 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_PARAM_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_NETINET_TCP_H 1 | #define HAVE_SYS_UN_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_SOCKET 1 | #define HAVE_SETSOCKOPT 1 | #define HAVE_GETHOSTBYNAME 1 | #define USE_PMI_PORT 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_GCC_ATTRIBUTE 1 | #define CH3_RANK_BITS 16 | #define HAVE_ASSERT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UIO_H 1 | #define HAVE_UUID_UUID_H 1 | #define HAVE_TIME_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ARPA_INET_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_NET_IF_H 1 | #define HAVE_INET_PTON 1 | #define HAVE_GETHOSTNAME 1 | #define HAVE_TIME 1 | #define HAVE_NET_IF_H 1 | #define HAVE_ASSERT_H 1 | #define HAVE_NETDB_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SCHED_H 1 | #define HAVE_SYS_MMAN_H 1 | #define HAVE_SYS_IOCTL_H 1 | #define HAVE_SYS_SOCKET_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_SYS_IPC_H 1 | #define HAVE_SYS_SHM_H 1 | #define HAVE_NETINET_IN_H 1 | #define HAVE_SIGNAL_H 1 | #define HAVE_SIGNAL 1 | #define HAVE_MKSTEMP 1 | #define HAVE_RAND 1 | #define HAVE_SRAND 1 | #define HAVE_MMAP 1 | #define HAVE_MUNMAP 1 | #define USE_MMAP_SHM 1 | #define MPID_NEM_INLINE 1 | #define PREFETCH_CELL 1 | #define USE_FASTBOX 1 | #define HAVE_H_ADDR_LIST 1 | #define HAVE_STRUCT_IFCONF 1 | #define HAVE_STRUCT_IFREQ 1 | /* end confdefs.h. */ | #include configure:49877: result: no configure:49877: checking for knem_io.h configure:49877: result: no configure:52040: ===== configuring src/mpi/romio ===== configure:52205: running /bin/sh ./configure --disable-option-checking '--prefix=/data/test-WRF-mpi/MPI/mpich-install' 'CC=gcc' '--disable-cxx' --cache-file=/dev/null --srcdir=. configure:52225: ===== done with src/mpi/romio configure ===== configure:52231: sourcing src/mpi/romio/localdefs configure:52040: ===== configuring src/pm/hydra ===== configure:52205: running /bin/sh ./configure --disable-option-checking '--prefix=/data/test-WRF-mpi/MPI/mpich-install' 'CC=gcc' '--disable-cxx' --cache-file=/dev/null --srcdir=. configure:52225: ===== done with src/pm/hydra configure ===== configure:52256: checking size of OPA_ptr_t configure:52261: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:52261: $? = 0 configure:52261: ./conftest configure:52261: $? = 0 configure:52279: result: 4 configure:52330: checking the sizeof MPI_Offset configure:52337: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:52337: $? = 0 configure:52337: ./conftest configure:52337: $? = 0 configure:52348: result: 8 configure:52416: checking whether the Fortran Offset type works with Fortran 77 configure:52425: pgf90 -c conftest.f >&5 configure:52425: $? = 0 configure:52431: result: yes configure:52445: checking whether the Fortran Offset type works with Fortran 90 configure:52454: pgf90 -c conftest.f90 >&5 configure:52454: $? = 0 configure:52466: result: yes configure:52564: checking for size of MPI_Status configure:52583: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c -lpthread >&5 configure:52583: $? = 0 configure:52583: ./conftest configure:52583: $? = 0 configure:52592: result: 20 configure:52624: checking for BSD/POSIX style global symbol lister configure:52666: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:52666: $? = 0 configure:52710: result: BSD style,/usr/bin/nm -g -B configure:52750: checking stdio.h usability configure:52750: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:52750: $? = 0 configure:52750: result: yes configure:52750: checking stdio.h presence configure:52750: gcc -E -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c configure:52750: $? = 0 configure:52750: result: yes configure:52750: checking for stdio.h configure:52750: result: yes configure:52760: checking for multiple __attribute__((alias)) support configure:52821: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:52821: $? = 0 configure:52825: cp conftest.o pac_conftest_other.o configure:52828: $? = 0 configure:52891: gcc -o conftest -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c pac_conftest_other.o -lpthread >&5 configure:52891: $? = 0 configure:52895: cp conftest pac_conftest_main configure:52898: $? = 0 configure:52958: ./pac_conftest_main configure:52961: $? = 0 configure:52968: result: yes configure:52996: checking the minimum alignment of Fortran common block of 1 integers configure:53035: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53035: $? = 0 configure:53039: mv conftest.o pac_conftest.o configure:53042: $? = 0 configure:53066: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align0.log 2>&1 configure:53066: $? = 0 configure:53148: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53148: $? = 0 configure:53152: mv conftest.o pac_conftest.o configure:53155: $? = 0 configure:53180: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align1.log 2>&1 configure:53180: $? = 0 configure:53187: diff -b pac_align0.log pac_align1.log > pac_test.log configure:53190: $? = 1 configure: program exited with status 1 *** diff -b pac_align0.log pac_align1.log : 1a2 > /usr/bin/ld: Warning: alignment 4 of symbol `mpifcmb_' in pac_conftest.o is smaller than 8 in conftest.o conftest.f90: /usr/bin/ld: Warning: alignment 4 of symbol `mpifcmb_' in pac_conftest.o is smaller than 8 in conftest.o failed C program was: /* confdefs.h */ #define PACKAGE_NAME "MPICH" #define PACKAGE_TARNAME "mpich" #define PACKAGE_VERSION "3.1.3" #define PACKAGE_STRING "MPICH 3.1.3" #define PACKAGE_BUGREPORT "discuss@mpich.org" #define PACKAGE_URL "http://www.mpich.org/" #define PACKAGE "mpich" #define VERSION "3.1.3" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_GETPAGESIZE 1 #define HAVE_GETPAGESIZE 1 #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL #define USE_LOGGING MPID_LOGGING_NONE #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE #define HAVE_ROMIO 1 #define HAVE__FUNC__ /**/ #define HAVE__FUNCTION__ /**/ #define HAVE_PRAGMA_WEAK 1 #define HAVE_WEAK_ATTRIBUTE 1 #define USE_WEAK_SYMBOLS 1 #define HAVE_MULTIPLE_PRAGMA_WEAK 1 #define ENABLE_PVAR_NEM 0 #define ENABLE_PVAR_RECVQ 0 #define ENABLE_PVAR_RMA 0 #define HAVE_LONG_LONG 1 #define STDCALL #define F77_NAME_LOWER_USCORE 1 #define HAVE_FORTRAN_BINDING 1 #define HAVE_F08_BINDING 1 #define HAVE_NAMEPUB_SERVICE 1 #define restrict __restrict #define HAVE_GCC_ATTRIBUTE 1 #define HAVE_BUILTIN_EXPECT 1 #define WORDS_LITTLEENDIAN 1 #define HAVE_LONG_DOUBLE 1 #define HAVE_LONG_LONG_INT 1 #define HAVE_MAX_INTEGER_ALIGNMENT 4 #define HAVE_MAX_STRUCT_ALIGNMENT 4 #define HAVE_MAX_FP_ALIGNMENT 4 #define SIZEOF_CHAR 1 #define SIZEOF_UNSIGNED_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_UNSIGNED_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_LONG 4 #define SIZEOF_UNSIGNED_LONG 4 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 12 #define SIZEOF_VOID_P 4 #define STDC_HEADERS 1 #define HAVE_STDDEF_H 1 #define SIZEOF_WCHAR_T 4 #define SIZEOF_FLOAT_INT 8 #define SIZEOF_DOUBLE_INT 12 #define SIZEOF_LONG_INT 8 #define SIZEOF_SHORT_INT 8 #define SIZEOF_TWO_INT 8 #define SIZEOF_LONG_DOUBLE_INT 16 #define HAVE_SYS_BITYPES_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_INT8_T 1 #define HAVE_INT16_T 1 #define HAVE_INT32_T 1 #define HAVE_INT64_T 1 #define HAVE_UINT8_T 1 #define HAVE_UINT16_T 1 #define HAVE_UINT32_T 1 #define HAVE_UINT64_T 1 #define HAVE_STDBOOL_H 1 #define HAVE_COMPLEX_H 1 #define SIZEOF__BOOL 1 #define SIZEOF_FLOAT__COMPLEX 8 #define SIZEOF_DOUBLE__COMPLEX 16 #define SIZEOF_LONG_DOUBLE__COMPLEX 24 #define HAVE__BOOL 1 #define HAVE_FLOAT__COMPLEX 1 #define HAVE_DOUBLE__COMPLEX 1 #define HAVE_LONG_DOUBLE__COMPLEX 1 #define MPIR_REAL4_CTYPE float #define MPIR_REAL8_CTYPE double #define MPIR_INTEGER1_CTYPE char #define MPIR_INTEGER2_CTYPE short #define MPIR_INTEGER4_CTYPE int #define MPIR_INTEGER8_CTYPE long long #define SIZEOF_F77_INTEGER 4 #define SIZEOF_F77_REAL 4 #define SIZEOF_F77_DOUBLE_PRECISION 8 #define MPIR_FC_REAL_CTYPE float #define MPIR_FC_DOUBLE_CTYPE double #define HAVE_FINT_IS_INT 1 #define F77_TRUE_VALUE_SET 1 #define F77_TRUE_VALUE -1 #define F77_FALSE_VALUE 0 #define HAVE_ANY_INT64_T_ALIGNMENT 1 #define HAVE_ANY_INT32_T_ALIGNMENT 1 #define HAVE_GCC_AND_PENTIUM_ASM 1 #define USE_ATOMIC_UPDATES /**/ #define STDC_HEADERS 1 #define HAVE_STDLIB_H 1 #define HAVE_STDARG_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ENDIAN_H 1 #define HAVE_ASSERT_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_SETITIMER 1 #define HAVE_ALARM 1 #define HAVE_VSNPRINTF 1 #define HAVE_VSPRINTF 1 #define HAVE_STRERROR 1 #define HAVE_STRNCASECMP 1 #define HAVE_DECL_STRERROR_R 1 #define HAVE_STRERROR_R 1 #define STRERROR_R_CHAR_P 1 #define HAVE_SNPRINTF 1 #define HAVE_QSORT 1 #define HAVE_VA_COPY 1 #define HAVE_MACRO_VA_ARGS 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STRDUP 1 #define HAVE_MKSTEMP 1 #define HAVE_FDOPEN 1 #define NEEDS_FDOPEN_DECL 1 #define HAVE_PUTENV 1 #define HAVE_GETTIMEOFDAY 1 #define MPIR_AINT_MAX INT_MAX #define SIZEOF_INT_IS_AINT 1 #define MPIR_Pint int #define MPIR_PINT_FMT_DEC_SPEC "%d" #define MPIR_Upint unsigned int #define MPIR_UPINT_FMT_DEC_SPEC "%u" #define MPIU_SIZE_T unsigned int #define SIZEOF_MPIR_BSEND_DATA_T 56 #define HAVE_PTHREAD_H 1 #define HAVE_PTHREAD_YIELD 1 #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX #define MPIU_TLS_SPECIFIER __thread #define HAVE_GETPID 1 #define HAVE_SCHED_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SCHED_YIELD 1 #define HAVE_USLEEP 1 #define HAVE_SLEEP 1 #define HAVE_SELECT 1 #define USE_NOTHING_FOR_YIELD 1 #define HAVE_SCHED_SETAFFINITY 1 #define HAVE_SCHED_GETAFFINITY 1 #define HAVE_CPU_SET_T 1 #define HAVE_UNISTD_H 1 #define HAVE_STRING_H 1 #define HAVE_STDLIB_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_STRINGS_H 1 #define HAVE_ASSERT_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SNPRINTF 1 #define HAVE_STRNCASECMP 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_NETINET_TCP_H 1 #define HAVE_SYS_UN_H 1 #define HAVE_NETDB_H 1 #define HAVE_SOCKET 1 #define HAVE_SETSOCKOPT 1 #define HAVE_GETHOSTBYNAME 1 #define USE_PMI_PORT 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_GCC_ATTRIBUTE 1 #define CH3_RANK_BITS 16 #define HAVE_ASSERT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_UUID_UUID_H 1 #define HAVE_TIME_H 1 #define HAVE_CTYPE_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NET_IF_H 1 #define HAVE_INET_PTON 1 #define HAVE_GETHOSTNAME 1 #define HAVE_TIME 1 #define HAVE_NET_IF_H 1 #define HAVE_ASSERT_H 1 #define HAVE_NETDB_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SCHED_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_SYS_IOCTL_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_IPC_H 1 #define HAVE_SYS_SHM_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_SIGNAL_H 1 #define HAVE_SIGNAL 1 #define HAVE_MKSTEMP 1 #define HAVE_RAND 1 #define HAVE_SRAND 1 #define HAVE_MMAP 1 #define HAVE_MUNMAP 1 #define USE_MMAP_SHM 1 #define MPID_NEM_INLINE 1 #define PREFETCH_CELL 1 #define USE_FASTBOX 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_STRUCT_IFCONF 1 #define HAVE_STRUCT_IFREQ 1 #define MPID_NEM_LOCAL_LMT_IMPL MPID_NEM_LOCAL_LMT_SHM_COPY #define MPID_NEM_USE_LOCK_FREE_QUEUES 1 #define SIZEOF_OPA_PTR_T 4 #define MPIR_OFFSET_MAX LLONG_MAX #define MPIR_COUNT_MAX LLONG_MAX #define MPIR_Ucount unsigned long long #define MPIF_STATUS_SIZE 5 #define HAVE_STDIO_H 1 /* end confdefs.h. */ struct mpif_cmblk_t_ { int imembers[1]; }; typedef struct mpif_cmblk_t_ mpif_cmblk_t; mpif_cmblk_t mpifcmbr __attribute__((aligned(4))) = {0}; extern mpif_cmblk_t _CMPIFCMB __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t MPIFCMB __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t MPIFCMB_ __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t _Cmpifcmb __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t mpifcmb __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t mpifcmb_ __attribute__ ((alias("mpifcmbr"))); failed Fortran program was: program fconftest integer isize parameter (isize=1) integer status_array(isize) common /mpifcmb/ status_array save /mpifcmb/ end configure:53148: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53148: $? = 0 configure:53152: mv conftest.o pac_conftest.o configure:53155: $? = 0 configure:53180: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align1.log 2>&1 configure:53180: $? = 0 configure:53187: diff -b pac_align0.log pac_align1.log > pac_test.log configure:53190: $? = 0 configure:53279: result: 8 configure:53290: checking the minimum alignment of Fortran common block of 5 integers configure:53329: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53329: $? = 0 configure:53333: mv conftest.o pac_conftest.o configure:53336: $? = 0 configure:53360: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align0.log 2>&1 configure:53360: $? = 0 configure:53442: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53442: $? = 0 configure:53446: mv conftest.o pac_conftest.o configure:53449: $? = 0 configure:53474: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align1.log 2>&1 configure:53474: $? = 0 configure:53481: diff -b pac_align0.log pac_align1.log > pac_test.log configure:53484: $? = 1 configure: program exited with status 1 *** diff -b pac_align0.log pac_align1.log : 1a2 > /usr/bin/ld: Warning: alignment 4 of symbol `mpifcmb_' in pac_conftest.o is smaller than 16 in conftest.o conftest.f90: /usr/bin/ld: Warning: alignment 4 of symbol `mpifcmb_' in pac_conftest.o is smaller than 16 in conftest.o failed C program was: /* confdefs.h */ #define PACKAGE_NAME "MPICH" #define PACKAGE_TARNAME "mpich" #define PACKAGE_VERSION "3.1.3" #define PACKAGE_STRING "MPICH 3.1.3" #define PACKAGE_BUGREPORT "discuss@mpich.org" #define PACKAGE_URL "http://www.mpich.org/" #define PACKAGE "mpich" #define VERSION "3.1.3" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_GETPAGESIZE 1 #define HAVE_GETPAGESIZE 1 #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL #define USE_LOGGING MPID_LOGGING_NONE #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE #define HAVE_ROMIO 1 #define HAVE__FUNC__ /**/ #define HAVE__FUNCTION__ /**/ #define HAVE_PRAGMA_WEAK 1 #define HAVE_WEAK_ATTRIBUTE 1 #define USE_WEAK_SYMBOLS 1 #define HAVE_MULTIPLE_PRAGMA_WEAK 1 #define ENABLE_PVAR_NEM 0 #define ENABLE_PVAR_RECVQ 0 #define ENABLE_PVAR_RMA 0 #define HAVE_LONG_LONG 1 #define STDCALL #define F77_NAME_LOWER_USCORE 1 #define HAVE_FORTRAN_BINDING 1 #define HAVE_F08_BINDING 1 #define HAVE_NAMEPUB_SERVICE 1 #define restrict __restrict #define HAVE_GCC_ATTRIBUTE 1 #define HAVE_BUILTIN_EXPECT 1 #define WORDS_LITTLEENDIAN 1 #define HAVE_LONG_DOUBLE 1 #define HAVE_LONG_LONG_INT 1 #define HAVE_MAX_INTEGER_ALIGNMENT 4 #define HAVE_MAX_STRUCT_ALIGNMENT 4 #define HAVE_MAX_FP_ALIGNMENT 4 #define SIZEOF_CHAR 1 #define SIZEOF_UNSIGNED_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_UNSIGNED_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_LONG 4 #define SIZEOF_UNSIGNED_LONG 4 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 12 #define SIZEOF_VOID_P 4 #define STDC_HEADERS 1 #define HAVE_STDDEF_H 1 #define SIZEOF_WCHAR_T 4 #define SIZEOF_FLOAT_INT 8 #define SIZEOF_DOUBLE_INT 12 #define SIZEOF_LONG_INT 8 #define SIZEOF_SHORT_INT 8 #define SIZEOF_TWO_INT 8 #define SIZEOF_LONG_DOUBLE_INT 16 #define HAVE_SYS_BITYPES_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_INT8_T 1 #define HAVE_INT16_T 1 #define HAVE_INT32_T 1 #define HAVE_INT64_T 1 #define HAVE_UINT8_T 1 #define HAVE_UINT16_T 1 #define HAVE_UINT32_T 1 #define HAVE_UINT64_T 1 #define HAVE_STDBOOL_H 1 #define HAVE_COMPLEX_H 1 #define SIZEOF__BOOL 1 #define SIZEOF_FLOAT__COMPLEX 8 #define SIZEOF_DOUBLE__COMPLEX 16 #define SIZEOF_LONG_DOUBLE__COMPLEX 24 #define HAVE__BOOL 1 #define HAVE_FLOAT__COMPLEX 1 #define HAVE_DOUBLE__COMPLEX 1 #define HAVE_LONG_DOUBLE__COMPLEX 1 #define MPIR_REAL4_CTYPE float #define MPIR_REAL8_CTYPE double #define MPIR_INTEGER1_CTYPE char #define MPIR_INTEGER2_CTYPE short #define MPIR_INTEGER4_CTYPE int #define MPIR_INTEGER8_CTYPE long long #define SIZEOF_F77_INTEGER 4 #define SIZEOF_F77_REAL 4 #define SIZEOF_F77_DOUBLE_PRECISION 8 #define MPIR_FC_REAL_CTYPE float #define MPIR_FC_DOUBLE_CTYPE double #define HAVE_FINT_IS_INT 1 #define F77_TRUE_VALUE_SET 1 #define F77_TRUE_VALUE -1 #define F77_FALSE_VALUE 0 #define HAVE_ANY_INT64_T_ALIGNMENT 1 #define HAVE_ANY_INT32_T_ALIGNMENT 1 #define HAVE_GCC_AND_PENTIUM_ASM 1 #define USE_ATOMIC_UPDATES /**/ #define STDC_HEADERS 1 #define HAVE_STDLIB_H 1 #define HAVE_STDARG_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ENDIAN_H 1 #define HAVE_ASSERT_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_SETITIMER 1 #define HAVE_ALARM 1 #define HAVE_VSNPRINTF 1 #define HAVE_VSPRINTF 1 #define HAVE_STRERROR 1 #define HAVE_STRNCASECMP 1 #define HAVE_DECL_STRERROR_R 1 #define HAVE_STRERROR_R 1 #define STRERROR_R_CHAR_P 1 #define HAVE_SNPRINTF 1 #define HAVE_QSORT 1 #define HAVE_VA_COPY 1 #define HAVE_MACRO_VA_ARGS 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STRDUP 1 #define HAVE_MKSTEMP 1 #define HAVE_FDOPEN 1 #define NEEDS_FDOPEN_DECL 1 #define HAVE_PUTENV 1 #define HAVE_GETTIMEOFDAY 1 #define MPIR_AINT_MAX INT_MAX #define SIZEOF_INT_IS_AINT 1 #define MPIR_Pint int #define MPIR_PINT_FMT_DEC_SPEC "%d" #define MPIR_Upint unsigned int #define MPIR_UPINT_FMT_DEC_SPEC "%u" #define MPIU_SIZE_T unsigned int #define SIZEOF_MPIR_BSEND_DATA_T 56 #define HAVE_PTHREAD_H 1 #define HAVE_PTHREAD_YIELD 1 #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX #define MPIU_TLS_SPECIFIER __thread #define HAVE_GETPID 1 #define HAVE_SCHED_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SCHED_YIELD 1 #define HAVE_USLEEP 1 #define HAVE_SLEEP 1 #define HAVE_SELECT 1 #define USE_NOTHING_FOR_YIELD 1 #define HAVE_SCHED_SETAFFINITY 1 #define HAVE_SCHED_GETAFFINITY 1 #define HAVE_CPU_SET_T 1 #define HAVE_UNISTD_H 1 #define HAVE_STRING_H 1 #define HAVE_STDLIB_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_STRINGS_H 1 #define HAVE_ASSERT_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SNPRINTF 1 #define HAVE_STRNCASECMP 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_NETINET_TCP_H 1 #define HAVE_SYS_UN_H 1 #define HAVE_NETDB_H 1 #define HAVE_SOCKET 1 #define HAVE_SETSOCKOPT 1 #define HAVE_GETHOSTBYNAME 1 #define USE_PMI_PORT 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_GCC_ATTRIBUTE 1 #define CH3_RANK_BITS 16 #define HAVE_ASSERT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_UUID_UUID_H 1 #define HAVE_TIME_H 1 #define HAVE_CTYPE_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NET_IF_H 1 #define HAVE_INET_PTON 1 #define HAVE_GETHOSTNAME 1 #define HAVE_TIME 1 #define HAVE_NET_IF_H 1 #define HAVE_ASSERT_H 1 #define HAVE_NETDB_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SCHED_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_SYS_IOCTL_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_IPC_H 1 #define HAVE_SYS_SHM_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_SIGNAL_H 1 #define HAVE_SIGNAL 1 #define HAVE_MKSTEMP 1 #define HAVE_RAND 1 #define HAVE_SRAND 1 #define HAVE_MMAP 1 #define HAVE_MUNMAP 1 #define USE_MMAP_SHM 1 #define MPID_NEM_INLINE 1 #define PREFETCH_CELL 1 #define USE_FASTBOX 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_STRUCT_IFCONF 1 #define HAVE_STRUCT_IFREQ 1 #define MPID_NEM_LOCAL_LMT_IMPL MPID_NEM_LOCAL_LMT_SHM_COPY #define MPID_NEM_USE_LOCK_FREE_QUEUES 1 #define SIZEOF_OPA_PTR_T 4 #define MPIR_OFFSET_MAX LLONG_MAX #define MPIR_COUNT_MAX LLONG_MAX #define MPIR_Ucount unsigned long long #define MPIF_STATUS_SIZE 5 #define HAVE_STDIO_H 1 /* end confdefs.h. */ struct mpif_cmblk_t_ { int imembers[5]; }; typedef struct mpif_cmblk_t_ mpif_cmblk_t; mpif_cmblk_t mpifcmbr __attribute__((aligned(4))) = {0}; extern mpif_cmblk_t _CMPIFCMB __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t MPIFCMB __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t MPIFCMB_ __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t _Cmpifcmb __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t mpifcmb __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t mpifcmb_ __attribute__ ((alias("mpifcmbr"))); failed Fortran program was: program fconftest integer isize parameter (isize=5) integer status_array(isize) common /mpifcmb/ status_array save /mpifcmb/ end configure:53442: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53442: $? = 0 configure:53446: mv conftest.o pac_conftest.o configure:53449: $? = 0 configure:53474: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align1.log 2>&1 configure:53474: $? = 0 configure:53481: diff -b pac_align0.log pac_align1.log > pac_test.log configure:53484: $? = 1 configure: program exited with status 1 *** diff -b pac_align0.log pac_align1.log : 1a2 > /usr/bin/ld: Warning: alignment 8 of symbol `mpifcmb_' in pac_conftest.o is smaller than 16 in conftest.o conftest.f90: /usr/bin/ld: Warning: alignment 8 of symbol `mpifcmb_' in pac_conftest.o is smaller than 16 in conftest.o failed C program was: /* confdefs.h */ #define PACKAGE_NAME "MPICH" #define PACKAGE_TARNAME "mpich" #define PACKAGE_VERSION "3.1.3" #define PACKAGE_STRING "MPICH 3.1.3" #define PACKAGE_BUGREPORT "discuss@mpich.org" #define PACKAGE_URL "http://www.mpich.org/" #define PACKAGE "mpich" #define VERSION "3.1.3" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_GETPAGESIZE 1 #define HAVE_GETPAGESIZE 1 #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL #define USE_LOGGING MPID_LOGGING_NONE #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE #define HAVE_ROMIO 1 #define HAVE__FUNC__ /**/ #define HAVE__FUNCTION__ /**/ #define HAVE_PRAGMA_WEAK 1 #define HAVE_WEAK_ATTRIBUTE 1 #define USE_WEAK_SYMBOLS 1 #define HAVE_MULTIPLE_PRAGMA_WEAK 1 #define ENABLE_PVAR_NEM 0 #define ENABLE_PVAR_RECVQ 0 #define ENABLE_PVAR_RMA 0 #define HAVE_LONG_LONG 1 #define STDCALL #define F77_NAME_LOWER_USCORE 1 #define HAVE_FORTRAN_BINDING 1 #define HAVE_F08_BINDING 1 #define HAVE_NAMEPUB_SERVICE 1 #define restrict __restrict #define HAVE_GCC_ATTRIBUTE 1 #define HAVE_BUILTIN_EXPECT 1 #define WORDS_LITTLEENDIAN 1 #define HAVE_LONG_DOUBLE 1 #define HAVE_LONG_LONG_INT 1 #define HAVE_MAX_INTEGER_ALIGNMENT 4 #define HAVE_MAX_STRUCT_ALIGNMENT 4 #define HAVE_MAX_FP_ALIGNMENT 4 #define SIZEOF_CHAR 1 #define SIZEOF_UNSIGNED_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_UNSIGNED_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_LONG 4 #define SIZEOF_UNSIGNED_LONG 4 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 12 #define SIZEOF_VOID_P 4 #define STDC_HEADERS 1 #define HAVE_STDDEF_H 1 #define SIZEOF_WCHAR_T 4 #define SIZEOF_FLOAT_INT 8 #define SIZEOF_DOUBLE_INT 12 #define SIZEOF_LONG_INT 8 #define SIZEOF_SHORT_INT 8 #define SIZEOF_TWO_INT 8 #define SIZEOF_LONG_DOUBLE_INT 16 #define HAVE_SYS_BITYPES_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_INT8_T 1 #define HAVE_INT16_T 1 #define HAVE_INT32_T 1 #define HAVE_INT64_T 1 #define HAVE_UINT8_T 1 #define HAVE_UINT16_T 1 #define HAVE_UINT32_T 1 #define HAVE_UINT64_T 1 #define HAVE_STDBOOL_H 1 #define HAVE_COMPLEX_H 1 #define SIZEOF__BOOL 1 #define SIZEOF_FLOAT__COMPLEX 8 #define SIZEOF_DOUBLE__COMPLEX 16 #define SIZEOF_LONG_DOUBLE__COMPLEX 24 #define HAVE__BOOL 1 #define HAVE_FLOAT__COMPLEX 1 #define HAVE_DOUBLE__COMPLEX 1 #define HAVE_LONG_DOUBLE__COMPLEX 1 #define MPIR_REAL4_CTYPE float #define MPIR_REAL8_CTYPE double #define MPIR_INTEGER1_CTYPE char #define MPIR_INTEGER2_CTYPE short #define MPIR_INTEGER4_CTYPE int #define MPIR_INTEGER8_CTYPE long long #define SIZEOF_F77_INTEGER 4 #define SIZEOF_F77_REAL 4 #define SIZEOF_F77_DOUBLE_PRECISION 8 #define MPIR_FC_REAL_CTYPE float #define MPIR_FC_DOUBLE_CTYPE double #define HAVE_FINT_IS_INT 1 #define F77_TRUE_VALUE_SET 1 #define F77_TRUE_VALUE -1 #define F77_FALSE_VALUE 0 #define HAVE_ANY_INT64_T_ALIGNMENT 1 #define HAVE_ANY_INT32_T_ALIGNMENT 1 #define HAVE_GCC_AND_PENTIUM_ASM 1 #define USE_ATOMIC_UPDATES /**/ #define STDC_HEADERS 1 #define HAVE_STDLIB_H 1 #define HAVE_STDARG_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ENDIAN_H 1 #define HAVE_ASSERT_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_SETITIMER 1 #define HAVE_ALARM 1 #define HAVE_VSNPRINTF 1 #define HAVE_VSPRINTF 1 #define HAVE_STRERROR 1 #define HAVE_STRNCASECMP 1 #define HAVE_DECL_STRERROR_R 1 #define HAVE_STRERROR_R 1 #define STRERROR_R_CHAR_P 1 #define HAVE_SNPRINTF 1 #define HAVE_QSORT 1 #define HAVE_VA_COPY 1 #define HAVE_MACRO_VA_ARGS 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STRDUP 1 #define HAVE_MKSTEMP 1 #define HAVE_FDOPEN 1 #define NEEDS_FDOPEN_DECL 1 #define HAVE_PUTENV 1 #define HAVE_GETTIMEOFDAY 1 #define MPIR_AINT_MAX INT_MAX #define SIZEOF_INT_IS_AINT 1 #define MPIR_Pint int #define MPIR_PINT_FMT_DEC_SPEC "%d" #define MPIR_Upint unsigned int #define MPIR_UPINT_FMT_DEC_SPEC "%u" #define MPIU_SIZE_T unsigned int #define SIZEOF_MPIR_BSEND_DATA_T 56 #define HAVE_PTHREAD_H 1 #define HAVE_PTHREAD_YIELD 1 #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX #define MPIU_TLS_SPECIFIER __thread #define HAVE_GETPID 1 #define HAVE_SCHED_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SCHED_YIELD 1 #define HAVE_USLEEP 1 #define HAVE_SLEEP 1 #define HAVE_SELECT 1 #define USE_NOTHING_FOR_YIELD 1 #define HAVE_SCHED_SETAFFINITY 1 #define HAVE_SCHED_GETAFFINITY 1 #define HAVE_CPU_SET_T 1 #define HAVE_UNISTD_H 1 #define HAVE_STRING_H 1 #define HAVE_STDLIB_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_STRINGS_H 1 #define HAVE_ASSERT_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SNPRINTF 1 #define HAVE_STRNCASECMP 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_NETINET_TCP_H 1 #define HAVE_SYS_UN_H 1 #define HAVE_NETDB_H 1 #define HAVE_SOCKET 1 #define HAVE_SETSOCKOPT 1 #define HAVE_GETHOSTBYNAME 1 #define USE_PMI_PORT 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_GCC_ATTRIBUTE 1 #define CH3_RANK_BITS 16 #define HAVE_ASSERT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_UUID_UUID_H 1 #define HAVE_TIME_H 1 #define HAVE_CTYPE_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NET_IF_H 1 #define HAVE_INET_PTON 1 #define HAVE_GETHOSTNAME 1 #define HAVE_TIME 1 #define HAVE_NET_IF_H 1 #define HAVE_ASSERT_H 1 #define HAVE_NETDB_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SCHED_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_SYS_IOCTL_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_IPC_H 1 #define HAVE_SYS_SHM_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_SIGNAL_H 1 #define HAVE_SIGNAL 1 #define HAVE_MKSTEMP 1 #define HAVE_RAND 1 #define HAVE_SRAND 1 #define HAVE_MMAP 1 #define HAVE_MUNMAP 1 #define USE_MMAP_SHM 1 #define MPID_NEM_INLINE 1 #define PREFETCH_CELL 1 #define USE_FASTBOX 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_STRUCT_IFCONF 1 #define HAVE_STRUCT_IFREQ 1 #define MPID_NEM_LOCAL_LMT_IMPL MPID_NEM_LOCAL_LMT_SHM_COPY #define MPID_NEM_USE_LOCK_FREE_QUEUES 1 #define SIZEOF_OPA_PTR_T 4 #define MPIR_OFFSET_MAX LLONG_MAX #define MPIR_COUNT_MAX LLONG_MAX #define MPIR_Ucount unsigned long long #define MPIF_STATUS_SIZE 5 #define HAVE_STDIO_H 1 /* end confdefs.h. */ struct mpif_cmblk_t_ { int imembers[5]; }; typedef struct mpif_cmblk_t_ mpif_cmblk_t; mpif_cmblk_t mpifcmbr __attribute__((aligned(8))) = {0}; extern mpif_cmblk_t _CMPIFCMB __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t MPIFCMB __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t MPIFCMB_ __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t _Cmpifcmb __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t mpifcmb __attribute__ ((alias("mpifcmbr"))); extern mpif_cmblk_t mpifcmb_ __attribute__ ((alias("mpifcmbr"))); failed Fortran program was: program fconftest integer isize parameter (isize=5) integer status_array(isize) common /mpifcmb/ status_array save /mpifcmb/ end configure:53442: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53442: $? = 0 configure:53446: mv conftest.o pac_conftest.o configure:53449: $? = 0 configure:53474: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align1.log 2>&1 configure:53474: $? = 0 configure:53481: diff -b pac_align0.log pac_align1.log > pac_test.log configure:53484: $? = 0 configure:53442: gcc -c -O2 -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include conftest.c >&5 configure:53442: $? = 0 configure:53446: mv conftest.o pac_conftest.o configure:53449: $? = 0 configure:53474: pgf90 -o conftest conftest.f90 pac_conftest.o -lpthread > pac_align1.log 2>&1 configure:53474: $? = 0 configure:53481: diff -b pac_align0.log pac_align1.log > pac_test.log configure:53484: $? = 0 configure:53585: result: 16, too small! reset to 32 configure:53636: WARNING: The ch3 device did not set the maximum size of an error string, 512 being used. configure:53803: creating ./config.lt ## ------------------ ## ## Running config.lt. ## ## ------------------ ## config.lt:787: creating libtool configure:56204: checking that generated files are newer than configure configure:56210: result: done configure:56426: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by MPICH config.status 3.1.3, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on airquality config.status:1976: creating src/binding/fortran/use_mpi/mpif90model.h config.status:1976: creating src/mpid/ch3/channels/nemesis/include/mpid_nem_net_module_defs.h config.status:1976: creating src/mpid/ch3/channels/nemesis/src/mpid_nem_net_array.c config.status:1976: creating Makefile config.status:1976: creating examples/Makefile config.status:1976: creating test/Makefile config.status:1976: creating test/commands/Makefile config.status:1976: creating src/include/mpichinfo.h config.status:1976: creating mpich-doxygen config.status:1976: creating src/include/glue_romio.h config.status:1976: creating src/include/mpichtimer.h config.status:1976: creating src/binding/cxx/mpicxx.h config.status:1976: creating src/binding/fortran/mpif_h/mpif.h config.status:1976: creating src/binding/fortran/mpif_h/setbotf.f config.status:1976: creating src/binding/fortran/mpif_h/setbot.c config.status:1976: creating src/binding/fortran/use_mpi/mpi_sizeofs.f90 config.status:1976: creating src/binding/fortran/use_mpi/mpi_base.f90 config.status:1976: creating src/binding/fortran/use_mpi/mpi_constants.f90 config.status:1976: creating src/packaging/pkgconfig/mpich.pc config.status:1976: creating src/packaging/envmods/mpich.module config.status:2084: WARNING: 'src/packaging/envmods/mpich.module.in' seems to ignore the --datarootdir setting config.status:1976: creating src/env/mpixxx_opts.conf config.status:1976: creating src/env/mpicc.sh config.status:1976: creating src/env/mpicc.bash config.status:1976: creating src/env/mpicxx.sh config.status:1976: creating src/env/mpicxx.bash config.status:1976: creating src/env/mpif77.sh config.status:1976: creating src/env/mpif77.bash config.status:1976: creating src/env/mpifort.sh config.status:1976: creating src/env/mpifort.bash config.status:1976: creating src/env/parkill config.status:1976: creating src/util/dbg/getfuncstack config.status:1976: creating src/include/mpi.h config.status:1976: creating doc/design/Makefile config.status:1976: creating doc/installguide/Makefile config.status:1976: creating doc/logging/Makefile config.status:1976: creating doc/refman/Makefile config.status:1976: creating doc/userguide/Makefile config.status:1976: creating test/commands/cmdtests config.status:1976: creating src/include/mpichconf.h config.status:2162: src/include/mpichconf.h is unchanged config.status:2210: executing depfiles commands config.status:2210: executing libtool commands config.status:2210: executing default-1 commands config.status:2210: executing default-2 commands config.status:2210: executing default-3 commands config.status:2210: executing default-4 commands config.status:2210: executing default-5 commands configure:59596: === configuring in test/mpi (/data/test-WRF-mpi/MPI/mpich-3.1.3/test/mpi) configure:59659: running /bin/sh ./configure --disable-option-checking '--prefix=/data/test-WRF-mpi/MPI/mpich-install' 'CC=gcc' '--disable-cxx' --cache-file=/dev/null --srcdir=. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=i686-pc-linux-gnu ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_inline=inline ac_cv_c_int16_t=yes ac_cv_c_int32_t=yes ac_cv_c_int64_t=yes ac_cv_c_int8_t=yes ac_cv_c_restrict=__restrict ac_cv_c_uint16_t=yes ac_cv_c_uint32_t=yes ac_cv_c_uint64_t=yes ac_cv_c_uint8_t=yes ac_cv_c_volatile=yes ac_cv_cxx_compiler_gnu=no ac_cv_env_AR_FLAGS_set= ac_cv_env_AR_FLAGS_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=gcc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_GCOV_set= ac_cv_env_GCOV_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPICHLIB_CFLAGS_set= ac_cv_env_MPICHLIB_CFLAGS_value= ac_cv_env_MPICHLIB_CPPFLAGS_set= ac_cv_env_MPICHLIB_CPPFLAGS_value= ac_cv_env_MPICHLIB_CXXFLAGS_set= ac_cv_env_MPICHLIB_CXXFLAGS_value= ac_cv_env_MPICHLIB_FCFLAGS_set= ac_cv_env_MPICHLIB_FCFLAGS_value= ac_cv_env_MPICHLIB_FFLAGS_set= ac_cv_env_MPICHLIB_FFLAGS_value= ac_cv_env_MPICHLIB_LDFLAGS_set= ac_cv_env_MPICHLIB_LDFLAGS_value= ac_cv_env_MPICHLIB_LIBS_set= ac_cv_env_MPICHLIB_LIBS_value= ac_cv_env_MPICXXLIBNAME_set= ac_cv_env_MPICXXLIBNAME_value= ac_cv_env_MPIFCLIBNAME_set= ac_cv_env_MPIFCLIBNAME_value= ac_cv_env_MPILIBNAME_set= ac_cv_env_MPILIBNAME_value= ac_cv_env_MPLLIBNAME_set= ac_cv_env_MPLLIBNAME_value= ac_cv_env_OPALIBNAME_set= ac_cv_env_OPALIBNAME_value= ac_cv_env_PAMILIBNAME_set= ac_cv_env_PAMILIBNAME_value= ac_cv_env_PMPILIBNAME_set= ac_cv_env_PMPILIBNAME_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=no ac_cv_f77_libs=' -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm' ac_cv_fc_compiler_gnu=no ac_cv_func_CFUUIDCreate=no ac_cv_func_alarm=yes ac_cv_func_alloca_works=yes ac_cv_func_bindprocessor=no ac_cv_func_clock_getres=no ac_cv_func_clock_gettime=no ac_cv_func_fdopen=yes ac_cv_func_gethostbyname=yes ac_cv_func_gethostname=yes ac_cv_func_gethrtime=no ac_cv_func_getpagesize=yes ac_cv_func_getpid=yes ac_cv_func_gettimeofday=yes ac_cv_func_inet_pton=yes ac_cv_func_mach_absolute_time=no ac_cv_func_mkstemp=yes ac_cv_func_mmap=yes ac_cv_func_munmap=yes ac_cv_func_pthread_cleanup_push=no ac_cv_func_pthread_key_create=yes ac_cv_func_pthread_yield=yes ac_cv_func_putenv=yes ac_cv_func_qsort=yes ac_cv_func_rand=yes ac_cv_func_sched_getaffinity=yes ac_cv_func_sched_setaffinity=yes ac_cv_func_sched_yield=yes ac_cv_func_select=yes ac_cv_func_setitimer=yes ac_cv_func_setsockopt=yes ac_cv_func_signal=yes ac_cv_func_sleep=yes ac_cv_func_snprintf=yes ac_cv_func_socket=yes ac_cv_func_srand=yes ac_cv_func_strdup=yes ac_cv_func_strerror=yes ac_cv_func_strerror_r=yes ac_cv_func_strerror_r_char_p=yes ac_cv_func_strncasecmp=yes ac_cv_func_thread_policy_set=no ac_cv_func_time=yes ac_cv_func_usleep=yes ac_cv_func_uuid_generate=no ac_cv_func_vsnprintf=yes ac_cv_func_vsprintf=yes ac_cv_func_yield=no ac_cv_have_decl_strerror_r=yes ac_cv_header_arpa_inet_h=yes ac_cv_header_assert_h=yes ac_cv_header_complex_h=yes ac_cv_header_ctype_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_endian_h=yes ac_cv_header_errno_h=yes ac_cv_header_hcoll_api_hcoll_api_h=no ac_cv_header_inttypes_h=yes ac_cv_header_knem_io_h=no ac_cv_header_limits_h=yes ac_cv_header_memory_h=yes ac_cv_header_net_if_h=yes ac_cv_header_netdb_h=yes ac_cv_header_netinet_in_h=yes ac_cv_header_netinet_tcp_h=yes ac_cv_header_pthread_h=yes ac_cv_header_sched_h=yes ac_cv_header_signal_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_bitypes_h=yes ac_cv_header_sys_ioctl_h=yes ac_cv_header_sys_ipc_h=yes ac_cv_header_sys_mman_h=yes ac_cv_header_sys_param_h=yes ac_cv_header_sys_select_h=yes ac_cv_header_sys_shm_h=yes ac_cv_header_sys_socket_h=yes ac_cv_header_sys_sockio_h=no ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_uio_h=yes ac_cv_header_sys_un_h=yes ac_cv_header_time_h=yes ac_cv_header_unistd_h=yes ac_cv_header_uuid_uuid_h=yes ac_cv_host=i686-pc-linux-gnu ac_cv_lib_hcoll_hcoll_init=no ac_cv_lib_pthread_pthread_key_create=yes ac_cv_objext=o ac_cv_path_BASH_SHELL=/bin/bash ac_cv_path_DOCTEXT=false ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_NM_G='/usr/bin/nm -g' ac_cv_path_PERL=/usr/bin/perl ac_cv_path_SED=/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_GCOV=gcov ac_cv_prog_KILLALL=killall ac_cv_prog_MAKE=make ac_cv_prog_RANLIB=ranlib ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_FC=pgf90 ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=no ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_fc_g=yes ac_cv_prog_make_make_set=yes ac_cv_search_gethostbyname='none required' ac_cv_search_socket='none required' ac_cv_sizeof_MPIR_Bsend_data_t=56 ac_cv_sizeof_MPI_Offset=8 ac_cv_sizeof_OPA_ptr_t=4 ac_cv_sizeof__Bool=1 ac_cv_sizeof_char=1 ac_cv_sizeof_double=8 ac_cv_sizeof_double__Complex=16 ac_cv_sizeof_double_int=12 ac_cv_sizeof_float=4 ac_cv_sizeof_float__Complex=8 ac_cv_sizeof_float_int=8 ac_cv_sizeof_int=4 ac_cv_sizeof_long=4 ac_cv_sizeof_long_double=12 ac_cv_sizeof_long_double__Complex=24 ac_cv_sizeof_long_double_int=16 ac_cv_sizeof_long_int=8 ac_cv_sizeof_long_long=8 ac_cv_sizeof_short=2 ac_cv_sizeof_short_int=8 ac_cv_sizeof_two_int=8 ac_cv_sizeof_unsigned_char=1 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_unsigned_long=4 ac_cv_sizeof_unsigned_long_long=8 ac_cv_sizeof_unsigned_short=2 ac_cv_sizeof_void_p=4 ac_cv_sizeof_wchar_t=4 ac_cv_tls=__thread ac_cv_type__Bool=yes ac_cv_type_double__Complex=yes ac_cv_type_float__Complex=yes ac_cv_type_long_double__Complex=yes ac_cv_type_pid_t=yes ac_cv_type_size_t=yes ac_cv_working_alloca_h=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=none am_cv_ar_interface=ar am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lac_cv_header_net_if_h=yes lac_cv_use_atomic_updates=yes lt_cv_ar_at_file=no lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fpic lt_cv_prog_compiler_pic_FC=-fpic lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_compiler_static_works_F77=yes lt_cv_prog_compiler_static_works_FC=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=98304 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop pac_cv_attr_weak=yes pac_cv_attr_weak_alias=yes pac_cv_attr_weak_import=yes pac_cv_c_double_alignment_exception=no pac_cv_c_double_pos_align=no pac_cv_c_fp_align_nr=4 pac_cv_c_llint_pos_align=no pac_cv_c_max_double_fp_align=four pac_cv_c_max_fp_align=four pac_cv_c_max_integer_align=four pac_cv_c_max_longdouble_fp_align=four pac_cv_c_struct_align_nr=4 pac_cv_cc_has___func__=yes pac_cv_cpu_set_defined=no pac_cv_f77_accepts_F=yes pac_cv_f77_flibs_valid=unknown pac_cv_f77_sizeof_double_precision=8 pac_cv_f77_sizeof_integer=4 pac_cv_f77_sizeof_real=4 pac_cv_fc_accepts_F90=yes pac_cv_fc_and_f77=yes pac_cv_fc_module_case=lower pac_cv_fc_module_ext=mod pac_cv_fc_module_incflag=-I pac_cv_fc_module_outflag='-module ' pac_cv_fort90_real8=yes pac_cv_fort_integer16=yes pac_cv_fort_integer1=yes pac_cv_fort_integer2=yes pac_cv_fort_integer4=yes pac_cv_fort_integer8=yes pac_cv_fort_real16=yes pac_cv_fort_real4=yes pac_cv_fort_real8=yes pac_cv_func_decl_fdopen=yes pac_cv_func_decl_gethostname=no pac_cv_func_decl_mkstemp=no pac_cv_func_decl_pthread_mutexattr_settype=yes pac_cv_func_decl_putenv=no pac_cv_func_decl_snprintf=no pac_cv_func_decl_strdup=no pac_cv_func_decl_strerror_r=no pac_cv_func_decl_usleep=no pac_cv_func_decl_vsnprintf=no pac_cv_func_pthread_cleanup_push=no pac_cv_func_va_copy=yes pac_cv_gnu_attr_format=yes pac_cv_gnu_attr_pure=yes pac_cv_has_pthread_mutex_errorcheck=no pac_cv_has_pthread_mutex_errorcheck_np=yes pac_cv_has_pthread_mutex_recursive=no pac_cv_has_pthread_mutex_recursive_np=yes pac_cv_have__func__=yes pac_cv_have__function__=yes pac_cv_have_cap__func__=no pac_cv_have_cpu_set_t=yes pac_cv_have_haddr_list=yes pac_cv_have_knem_io_h=no pac_cv_have_long_double=yes pac_cv_have_long_long=yes pac_cv_have_socklen_t=yes pac_cv_have_struct_ifconf=yes pac_cv_have_struct_ifreq=yes pac_cv_int32_t_alignment=no pac_cv_int64_t_alignment=no pac_cv_mkdir_p=yes pac_cv_my_conf_dir=/data/test-WRF-mpi/MPI/mpich-3.1.3 pac_cv_pointers_have_int_alignment=yes pac_cv_prog_c_multiple_weak_symbols=yes pac_cv_prog_c_unaligned_doubles=yes pac_cv_prog_c_weak_symbols='pragma weak' pac_cv_prog_f77_and_c_stdio_libs=none pac_cv_prog_f77_exclaim_comments=yes pac_cv_prog_f77_has_incdir=-I pac_cv_prog_f77_library_dir_flag=-L pac_cv_prog_f77_mismatched_args=yes pac_cv_prog_f77_mismatched_args_parm= pac_cv_prog_f77_name_mangle='lower uscore' pac_cv_prog_f77_true_false_value='-1 0' pac_cv_prog_fc_and_c_stdio_libs=none pac_cv_prog_fc_cross=no pac_cv_prog_fc_int_kind_16=8 pac_cv_prog_fc_int_kind_8=4 pac_cv_prog_fc_works=yes pac_cv_prog_make_allows_comments=yes pac_cv_prog_make_found_clock_skew=no pac_cv_prog_make_include=yes pac_cv_prog_make_set_cflags=yes pac_cv_prog_make_vpath=VPATH pac_cv_sizeof_mpi_status=20 ## ----------------- ## ## Output variables. ## ## ----------------- ## ABIVERSION='12:4:0' ABIVERSIONFLAGS='-version-info $(ABIVERSION)' ACLOCAL='${SHELL} /data/test-WRF-mpi/MPI/mpich-3.1.3/confdb/missing aclocal-1.14' ADDRESS_KIND='4' ALLOCA='' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='0' AM_V='$(V)' AR='ar' AR_FLAGS='cr' AS='as' ASSERT_LEVEL='' AUTOCONF='${SHELL} /data/test-WRF-mpi/MPI/mpich-3.1.3/confdb/missing autoconf' AUTOHEADER='${SHELL} /data/test-WRF-mpi/MPI/mpich-3.1.3/confdb/missing autoheader' AUTOMAKE='${SHELL} /data/test-WRF-mpi/MPI/mpich-3.1.3/confdb/missing automake-1.14' AWK='gawk' BASH_SHELL='/bin/bash' BGQ_INSTALL_DIR='' BSEND_OVERHEAD='56' BUILD_BASH_SCRIPTS_FALSE='#' BUILD_BASH_SCRIPTS_TRUE='' BUILD_CH3_FALSE='#' BUILD_CH3_NEMESIS_FALSE='#' BUILD_CH3_NEMESIS_TRUE='' BUILD_CH3_SOCK_FALSE='' BUILD_CH3_SOCK_TRUE='#' BUILD_CH3_TRUE='' BUILD_CH3_UTIL_FTB_FALSE='' BUILD_CH3_UTIL_FTB_TRUE='#' BUILD_CH3_UTIL_SOCK_FALSE='' BUILD_CH3_UTIL_SOCK_TRUE='#' BUILD_COVERAGE_FALSE='' BUILD_COVERAGE_TRUE='#' BUILD_CXX_BINDING_FALSE='' BUILD_CXX_BINDING_TRUE='#' BUILD_DEBUGGER_DLL_FALSE='' BUILD_DEBUGGER_DLL_TRUE='#' BUILD_F08_BINDING_FALSE='' BUILD_F08_BINDING_TRUE='#' BUILD_F77_BINDING_FALSE='#' BUILD_F77_BINDING_TRUE='' BUILD_FC_BINDING_FALSE='#' BUILD_FC_BINDING_TRUE='' BUILD_HCOLL_FALSE='' BUILD_HCOLL_TRUE='#' BUILD_LOGGING_RLOG_FALSE='' BUILD_LOGGING_RLOG_TRUE='#' BUILD_MPID_COMMON_DATATYPE_FALSE='#' BUILD_MPID_COMMON_DATATYPE_TRUE='' BUILD_MPID_COMMON_SCHED_FALSE='#' BUILD_MPID_COMMON_SCHED_TRUE='' BUILD_MPID_COMMON_SOCK_FALSE='' BUILD_MPID_COMMON_SOCK_POLL_FALSE='' BUILD_MPID_COMMON_SOCK_POLL_TRUE='#' BUILD_MPID_COMMON_SOCK_TRUE='#' BUILD_MPID_COMMON_THREAD_FALSE='#' BUILD_MPID_COMMON_THREAD_TRUE='' BUILD_NAMEPUB_FILE_FALSE='' BUILD_NAMEPUB_FILE_TRUE='#' BUILD_NAMEPUB_PMI_FALSE='#' BUILD_NAMEPUB_PMI_TRUE='' BUILD_NEMESIS_NETMOD_IB_FALSE='' BUILD_NEMESIS_NETMOD_IB_TRUE='#' BUILD_NEMESIS_NETMOD_MXM_FALSE='' BUILD_NEMESIS_NETMOD_MXM_TRUE='#' BUILD_NEMESIS_NETMOD_MX_FALSE='' BUILD_NEMESIS_NETMOD_MX_TRUE='#' BUILD_NEMESIS_NETMOD_NEWMAD_FALSE='' BUILD_NEMESIS_NETMOD_NEWMAD_TRUE='#' BUILD_NEMESIS_NETMOD_PORTALS4_FALSE='' BUILD_NEMESIS_NETMOD_PORTALS4_TRUE='#' BUILD_NEMESIS_NETMOD_SCIF_FALSE='' BUILD_NEMESIS_NETMOD_SCIF_TRUE='#' BUILD_NEMESIS_NETMOD_TCP_FALSE='#' BUILD_NEMESIS_NETMOD_TCP_TRUE='' BUILD_PAMID_FALSE='' BUILD_PAMID_TRUE='#' BUILD_PMI_PMI2_FALSE='' BUILD_PMI_PMI2_POE_FALSE='' BUILD_PMI_PMI2_POE_TRUE='#' BUILD_PMI_PMI2_SIMPLE_FALSE='' BUILD_PMI_PMI2_SIMPLE_TRUE='#' BUILD_PMI_PMI2_TRUE='#' BUILD_PMI_SIMPLE_FALSE='#' BUILD_PMI_SIMPLE_TRUE='' BUILD_PMI_SLURM_FALSE='' BUILD_PMI_SLURM_TRUE='#' BUILD_PM_GFORKER_FALSE='' BUILD_PM_GFORKER_TRUE='#' BUILD_PM_HYDRA_FALSE='#' BUILD_PM_HYDRA_TRUE='' BUILD_PM_REMSHELL_FALSE='' BUILD_PM_REMSHELL_TRUE='#' BUILD_PM_UTIL_FALSE='' BUILD_PM_UTIL_TRUE='#' BUILD_PROFILING_LIB_FALSE='' BUILD_PROFILING_LIB_TRUE='#' BUILD_ROMIO_FALSE='#' BUILD_ROMIO_TRUE='' CC='gcc' CCDEPMODE='depmode=gcc3' CFLAGS=' -O2' CMB_1INT_ALIGNMENT='__attribute__((aligned(8)))' CMB_STATUS_ALIGNMENT='__attribute__((aligned(32)))' CONFIGURE_ARGS_CLEAN='CC=gcc --disable-cxx -prefix=/data/test-WRF-mpi/MPI/mpich-install' CONFIGURE_ARGUMENTS=' '\''CC=gcc'\'' '\''--disable-cxx'\'' '\''-prefix=/data/test-WRF-mpi/MPI/mpich-install'\''' COUNT_KIND='8' CPP='gcc -E' CPPFLAGS=' -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl/include -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src -D_REENTRANT -I/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpi/romio/include' CXX='no' CXXCPP='' CXXDEPMODE='depmode=none' CXXFLAGS=' ' CYGPATH_W='echo' C_LINKPATH_SHL='' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DEVICE='ch3:nemesis' DLLIMPORT='' DLLTOOL='false' DOCTEXT='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' EXTERNAL_LIBS='-lpthread ' F77='pgf90' F77CPP='' F77_COMPLEX16='1275072554' F77_COMPLEX32='MPI_DATATYPE_NULL' F77_COMPLEX8='1275070504' F77_INCDIR='-I' F77_INTEGER16='MPI_DATATYPE_NULL' F77_INTEGER1='1275068717' F77_INTEGER2='1275068975' F77_INTEGER4='1275069488' F77_INTEGER8='1275070513' F77_LIBDIR_LEADER='-L' F77_NAME_MANGLE='F77_NAME_LOWER_USCORE' F77_OTHER_LIBS='' F77_REAL16='MPI_DATATYPE_NULL' F77_REAL4='1275069479' F77_REAL8='1275070505' FC='pgf90' FCCPP='' FCEXT='f90' FCFLAGS=' ' FCINC='-I' FCINCFLAG='-I' FCMODEXT='mod' FCMODINCFLAG='-I' FCMODINCSPEC='' FCMODOUTFLAG='-module ' FC_ALL_INTEGER_MODELS=' 2 , 1, 4 , 2, 9 , 4, 18 , 8,' FC_DOUBLE_MODEL=' 15 , 307' FC_INTEGER_MODEL=' 9' FC_INTEGER_MODEL_MAP=' { 2 , 1 , 1 }, { 4 , 2 , 2 }, { 9 , 4 , 4 }, { 18 , 8 , 8 },' FC_OTHER_LIBS='' FC_REAL_MODEL=' 6 , 37' FC_WORK_FILES_ARG='' FFLAGS=' ' FGREP='/bin/grep -F' FILE='' FLIBS=' -L/usr/pgi/linux86/7.2-1/lib -L/usr/lib -L/usr/lib/gcc/i386-redhat-linux/3.4.3 -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -lpgsse1 -lpgsse2 -lnspgc -lpgc -lrt -lpthread -lm' FORTRAN_BINDING='1' FORTRAN_MPI_OFFSET='integer*8' GCOV='gcov' GNUCXX_MINORVERSION='' GNUCXX_VERSION='' GREP='/bin/grep' HAVE_CXX_EXCEPTIONS='' HAVE_ERROR_CHECKING='1' HAVE_ROMIO='#include "mpio.h"' INCLUDE_MPICXX_H='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_MPIF77_FALSE='' INSTALL_MPIF77_TRUE='#' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' INTEGER_KIND='4' INTERLIB_DEPS='yes' KILLALL='killall' LD='/usr/bin/ld' LDFLAGS=' ' LIBOBJS='' LIBS='-lpthread ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LPMPILIBNAME='' LTLIBOBJS='' MAINT='' MAINTAINER_MODE_FALSE='#' MAINTAINER_MODE_TRUE='' MAKE='make' MAKEINFO='${SHELL} /data/test-WRF-mpi/MPI/mpich-3.1.3/confdb/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='mkdir -p' MPIBASEMODNAME='mpi_base' MPICC_NAME='mpicc' MPICHLIB_CFLAGS='' MPICHLIB_CPPFLAGS='' MPICHLIB_CXXFLAGS='' MPICHLIB_FCFLAGS='' MPICHLIB_FFLAGS='' MPICHLIB_LDFLAGS='' MPICHLIB_LIBS='' MPICH_NUMVERSION='30103300' MPICH_RELEASE_DATE='Wed Oct 8 09:37:19 CDT 2014' MPICH_TIMER_KIND='USE_GETTIMEOFDAY' MPICH_VERSION='3.1.3' MPICONSTMODNAME='mpi_constants' MPICPP_NAME='mpic++' MPICXXLIBNAME='mpicxx' MPICXX_NAME='mpicxx' MPID_TIMER_TYPE='struct timeval' MPIF77_NAME='mpif77' MPIF90_NAME='mpif90' MPIFCLIBNAME='mpifort' MPIFORT_NAME='mpifort' MPIFPMPI=',PMPI_WTIME,PMPI_WTICK' MPILIBNAME='mpi' MPIMODNAME='mpi' MPIR_CXX_BOOL='0x0c000000' MPIR_CXX_COMPLEX='0x0c000000' MPIR_CXX_DOUBLE_COMPLEX='0x0c000000' MPIR_CXX_LONG_DOUBLE_COMPLEX='0x0c000000' MPIR_PINT='int' MPISIZEOFMODNAME='mpi_sizeofs' MPIU_DLL_SPEC_DEF='#define MPIU_DLL_SPEC' MPI_2COMPLEX='1275072548' MPI_2DOUBLE_COMPLEX='1275076645' MPI_2DOUBLE_PRECISION='1275072547' MPI_2INT='0x4c000816' MPI_2INTEGER='1275070496' MPI_2REAL='1275070497' MPI_AINT='int' MPI_AINT_DATATYPE='0x4c000443' MPI_AINT_FMT_DEC_SPEC='%d' MPI_AINT_FMT_HEX_SPEC='%x' MPI_BYTE='0x4c00010d' MPI_CHAR='0x4c000101' MPI_CHARACTER='1275068698' MPI_COMPLEX16='0x4c00102a' MPI_COMPLEX32='MPI_DATATYPE_NULL' MPI_COMPLEX8='0x4c000828' MPI_COMPLEX='1275070494' MPI_COUNT='long long' MPI_COUNT_DATATYPE='0x4c000845' MPI_C_BOOL='0x4c00013f' MPI_C_DOUBLE_COMPLEX='0x4c001041' MPI_C_FLOAT_COMPLEX='0x4c000840' MPI_C_LONG_DOUBLE_COMPLEX='0x4c001842' MPI_DOUBLE='0x4c00080b' MPI_DOUBLE_COMPLEX='1275072546' MPI_DOUBLE_INT='0x8c000001' MPI_DOUBLE_PRECISION='1275070495' MPI_F77_2INT='1275070486' MPI_F77_AINT='1275069507' MPI_F77_BYTE='1275068685' MPI_F77_CHAR='1275068673' MPI_F77_COUNT='1275070533' MPI_F77_CXX_BOOL='MPI_DATATYPE_NULL' MPI_F77_CXX_DOUBLE_COMPLEX='MPI_DATATYPE_NULL' MPI_F77_CXX_FLOAT_COMPLEX='MPI_DATATYPE_NULL' MPI_F77_CXX_LONG_DOUBLE_COMPLEX='MPI_DATATYPE_NULL' MPI_F77_C_BOOL='1275068735' MPI_F77_C_COMPLEX='1275070528' MPI_F77_C_DOUBLE_COMPLEX='1275072577' MPI_F77_C_FLOAT_COMPLEX='1275070528' MPI_F77_C_LONG_DOUBLE_COMPLEX='1275074626' MPI_F77_DOUBLE='1275070475' MPI_F77_DOUBLE_INT='-1946157055' MPI_F77_FLOAT='1275069450' MPI_F77_FLOAT_INT='-1946157056' MPI_F77_INT16_T='1275068984' MPI_F77_INT32_T='1275069497' MPI_F77_INT64_T='1275070522' MPI_F77_INT8_T='1275068727' MPI_F77_INT='1275069445' MPI_F77_LB='1275068432' MPI_F77_LONG='1275069447' MPI_F77_LONG_DOUBLE='1275071500' MPI_F77_LONG_DOUBLE_INT='-1946157052' MPI_F77_LONG_INT='-1946157054' MPI_F77_LONG_LONG='1275070473' MPI_F77_LONG_LONG_INT='1275070473' MPI_F77_OFFSET='1275070532' MPI_F77_PACKED='1275068687' MPI_F77_SHORT='1275068931' MPI_F77_SHORT_INT='-1946157053' MPI_F77_SIGNED_CHAR='1275068696' MPI_F77_UB='1275068433' MPI_F77_UINT16_T='1275068988' MPI_F77_UINT32_T='1275069501' MPI_F77_UINT64_T='1275070526' MPI_F77_UINT8_T='1275068731' MPI_F77_UNSIGNED='1275069446' MPI_F77_UNSIGNED_CHAR='1275068674' MPI_F77_UNSIGNED_LONG='1275069448' MPI_F77_UNSIGNED_LONG_LONG='1275070489' MPI_F77_UNSIGNED_SHORT='1275068932' MPI_F77_WCHAR='1275069454' MPI_FINT='int' MPI_FLOAT='0x4c00040a' MPI_FLOAT_INT='0x8c000000' MPI_INT16_T='0x4c000238' MPI_INT32_T='0x4c000439' MPI_INT64_T='0x4c00083a' MPI_INT8_T='0x4c000137' MPI_INT='0x4c000405' MPI_INTEGER16='MPI_DATATYPE_NULL' MPI_INTEGER1='0x4c00012d' MPI_INTEGER2='0x4c00022f' MPI_INTEGER4='0x4c000430' MPI_INTEGER8='0x4c000831' MPI_INTEGER='1275069467' MPI_LB='0x4c000010' MPI_LOGICAL='1275069469' MPI_LONG='0x4c000407' MPI_LONG_DOUBLE='0x4c000c0c' MPI_LONG_DOUBLE_INT='0x8c000004' MPI_LONG_INT='0x8c000002' MPI_LONG_LONG='0x4c000809' MPI_MAX_ERROR_STRING='512' MPI_MAX_LIBRARY_VERSION_STRING='8192' MPI_MAX_PROCESSOR_NAME='128' MPI_OFFSET='long long' MPI_OFFSET_DATATYPE='0x4c000844' MPI_OFFSET_TYPEDEF='typedef long long MPI_Offset;' MPI_PACKED='0x4c00010f' MPI_REAL16='MPI_DATATYPE_NULL' MPI_REAL4='0x4c000427' MPI_REAL8='0x4c000829' MPI_REAL='1275069468' MPI_SHORT='0x4c000203' MPI_SHORT_INT='0x8c000003' MPI_SIGNED_CHAR='0x4c000118' MPI_STATUS_SIZE='5' MPI_UB='0x4c000011' MPI_UINT16_T='0x4c00023c' MPI_UINT32_T='0x4c00043d' MPI_UINT64_T='0x4c00083e' MPI_UINT8_T='0x4c00013b' MPI_UNSIGNED_CHAR='0x4c000102' MPI_UNSIGNED_INT='0x4c000406' MPI_UNSIGNED_LONG='0x4c000408' MPI_UNSIGNED_LONG_LONG='0x4c000819' MPI_UNSIGNED_SHORT='0x4c000204' MPI_WCHAR='0x4c00040e' MPLLIBNAME='mpl' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OFFSET_KIND='8' OPALIBNAME='opa' OTOOL64='' OTOOL='' PACKAGE='mpich' PACKAGE_BUGREPORT='discuss@mpich.org' PACKAGE_NAME='MPICH' PACKAGE_STRING='MPICH 3.1.3' PACKAGE_TARNAME='mpich' PACKAGE_URL='http://www.mpich.org/' PACKAGE_VERSION='3.1.3' PAMILIBNAME='pami' PAPI_INCLUDE='' PATH_SEPARATOR=':' PERL='/usr/bin/perl' PMPILIBNAME='pmpi' PRIMARY_PM_GFORKER_FALSE='' PRIMARY_PM_GFORKER_TRUE='#' PRIMARY_PM_REMSHELL_FALSE='' PRIMARY_PM_REMSHELL_TRUE='#' QUEUE_BINARY_SEARCH_SUPPORT_FALSE='' QUEUE_BINARY_SEARCH_SUPPORT_TRUE='#' RANLIB='ranlib' REQD='' REQI1='' REQI2='' REQI8='' RSH='' SED='/bin/sed' SET_CFLAGS='CFLAGS=' SET_MAKE='MAKE=make' SHELL='/bin/sh' SHLIB_EXT='.so' SIZEOF_FC_CHARACTER='1' SIZEOF_FC_DOUBLE_PRECISION='8' SIZEOF_FC_INTEGER='4' SIZEOF_FC_REAL='4' SIZEOF_MPI_STATUS='20' SSH='' STRIP='strip' THREAD_SERIALIZED_OR_MULTIPLE_FALSE='#' THREAD_SERIALIZED_OR_MULTIPLE_TRUE='' USER_CFLAGS='' USER_CPPFLAGS='' USER_CXXFLAGS='' USER_EXTRA_LIBS='' USER_FCFLAGS='' USER_FFLAGS='' USER_LDFLAGS='' USER_LIBS='' USE_DBG_LOGGING='0' VERSION='3.1.3' VPATH='VPATH=.:${srcdir}' WRAPPER_CFLAGS=' ' WRAPPER_CPPFLAGS=' ' WRAPPER_CXXFLAGS=' ' WRAPPER_EXTRA_LIBS='' WRAPPER_FCFLAGS=' ' WRAPPER_FFLAGS=' ' WRAPPER_LDFLAGS='' WRAPPER_LIBS='' WRAPPER_RPATH_LDFLAGS='-Wl,-rpath -Wl,${exec_prefix}/lib' WTIME_DOUBLE_TYPE='REAL*8' XARGS_NODATA_OPT='-r' ac_ct_AR='ar' ac_ct_CC='' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='pgf90' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='' am__fastdepCXX_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindings=' f77 f90 f08' bindir='${exec_prefix}/bin' build='i686-pc-linux-gnu' build_alias='' build_cpu='i686' build_os='linux-gnu' build_vendor='pc' channel_name='nemesis' datadir='${datarootdir}' datarootdir='${prefix}/share' device_name='ch3' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enable_wrapper_rpath='yes' exec_prefix='${prefix}' host='i686-pc-linux-gnu' host_alias='' host_cpu='i686' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /data/test-WRF-mpi/MPI/mpich-3.1.3/confdb/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' libmpi_so_version='12:4:0' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' master_top_builddir='/data/test-WRF-mpi/MPI/mpich-3.1.3' master_top_srcdir='/data/test-WRF-mpi/MPI/mpich-3.1.3' mkdir_p='$(MKDIR_P)' mmx_copy_s='' modincdir='${prefix}/include' mpich_libtool_static_flag='-static' mpllib='src/mpl/libmpl.la' mpllibdir='/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl' mplsrcdir='/data/test-WRF-mpi/MPI/mpich-3.1.3/src/mpl' nemesis_nets_array='MPIDI_NEM_TCP' nemesis_nets_array_sz='1' nemesis_nets_dirs='tcp' nemesis_nets_func_array='&MPIDI_nem_tcp_funcs' nemesis_nets_func_decl='MPIDI_nem_tcp_funcs' nemesis_nets_macro_defs='#define MPIDI_NEM_TCP 0' nemesis_nets_strings='"tcp"' nemesis_networks='tcp' oldincludedir='/usr/include' opalib='/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src/libopa.la' opalibdir='/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa/src' opasrcdir='/data/test-WRF-mpi/MPI/mpich-3.1.3/src/openpa' pdfdir='${docdir}' pkgconfigdir='${exec_prefix}/lib/pkgconfig' pm_name='hydra' prefix='/data/test-WRF-mpi/MPI/mpich-install' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs=' test/mpi' sysconfdir='${prefix}/etc' target_alias='' ## ------------------- ## ## File substitutions. ## ## ------------------- ## cc_shlib_conf='src/env/cc_shlib.conf' cxx_shlib_conf='' f77_shlib_conf='src/env/f77_shlib.conf' fc_shlib_conf='src/env/fc_shlib.conf' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "MPICH" #define PACKAGE_TARNAME "mpich" #define PACKAGE_VERSION "3.1.3" #define PACKAGE_STRING "MPICH 3.1.3" #define PACKAGE_BUGREPORT "discuss@mpich.org" #define PACKAGE_URL "http://www.mpich.org/" #define PACKAGE "mpich" #define VERSION "3.1.3" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_GETPAGESIZE 1 #define HAVE_GETPAGESIZE 1 #define HAVE_ERROR_CHECKING MPID_ERROR_LEVEL_ALL #define MPICH_ERROR_MSG_LEVEL MPICH_ERROR_MSG_ALL #define USE_LOGGING MPID_LOGGING_NONE #define MPICH_THREAD_LEVEL MPI_THREAD_MULTIPLE #define MPIU_THREAD_GRANULARITY MPIU_THREAD_GRANULARITY_GLOBAL #define MPIU_HANDLE_ALLOCATION_METHOD MPIU_HANDLE_ALLOCATION_MUTEX #define MPIU_THREAD_REFCOUNT MPIU_REFCOUNT_NONE #define HAVE_ROMIO 1 #define HAVE__FUNC__ /**/ #define HAVE__FUNCTION__ /**/ #define HAVE_PRAGMA_WEAK 1 #define HAVE_WEAK_ATTRIBUTE 1 #define USE_WEAK_SYMBOLS 1 #define HAVE_MULTIPLE_PRAGMA_WEAK 1 #define ENABLE_PVAR_NEM 0 #define ENABLE_PVAR_RECVQ 0 #define ENABLE_PVAR_RMA 0 #define HAVE_LONG_LONG 1 #define STDCALL #define F77_NAME_LOWER_USCORE 1 #define HAVE_FORTRAN_BINDING 1 #define HAVE_F08_BINDING 1 #define HAVE_NAMEPUB_SERVICE 1 #define restrict __restrict #define HAVE_GCC_ATTRIBUTE 1 #define HAVE_BUILTIN_EXPECT 1 #define WORDS_LITTLEENDIAN 1 #define HAVE_LONG_DOUBLE 1 #define HAVE_LONG_LONG_INT 1 #define HAVE_MAX_INTEGER_ALIGNMENT 4 #define HAVE_MAX_STRUCT_ALIGNMENT 4 #define HAVE_MAX_FP_ALIGNMENT 4 #define SIZEOF_CHAR 1 #define SIZEOF_UNSIGNED_CHAR 1 #define SIZEOF_SHORT 2 #define SIZEOF_UNSIGNED_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_LONG 4 #define SIZEOF_UNSIGNED_LONG 4 #define SIZEOF_LONG_LONG 8 #define SIZEOF_UNSIGNED_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_LONG_DOUBLE 12 #define SIZEOF_VOID_P 4 #define STDC_HEADERS 1 #define HAVE_STDDEF_H 1 #define SIZEOF_WCHAR_T 4 #define SIZEOF_FLOAT_INT 8 #define SIZEOF_DOUBLE_INT 12 #define SIZEOF_LONG_INT 8 #define SIZEOF_SHORT_INT 8 #define SIZEOF_TWO_INT 8 #define SIZEOF_LONG_DOUBLE_INT 16 #define HAVE_SYS_BITYPES_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_INT8_T 1 #define HAVE_INT16_T 1 #define HAVE_INT32_T 1 #define HAVE_INT64_T 1 #define HAVE_UINT8_T 1 #define HAVE_UINT16_T 1 #define HAVE_UINT32_T 1 #define HAVE_UINT64_T 1 #define HAVE_STDBOOL_H 1 #define HAVE_COMPLEX_H 1 #define SIZEOF__BOOL 1 #define SIZEOF_FLOAT__COMPLEX 8 #define SIZEOF_DOUBLE__COMPLEX 16 #define SIZEOF_LONG_DOUBLE__COMPLEX 24 #define HAVE__BOOL 1 #define HAVE_FLOAT__COMPLEX 1 #define HAVE_DOUBLE__COMPLEX 1 #define HAVE_LONG_DOUBLE__COMPLEX 1 #define MPIR_REAL4_CTYPE float #define MPIR_REAL8_CTYPE double #define MPIR_INTEGER1_CTYPE char #define MPIR_INTEGER2_CTYPE short #define MPIR_INTEGER4_CTYPE int #define MPIR_INTEGER8_CTYPE long long #define SIZEOF_F77_INTEGER 4 #define SIZEOF_F77_REAL 4 #define SIZEOF_F77_DOUBLE_PRECISION 8 #define MPIR_FC_REAL_CTYPE float #define MPIR_FC_DOUBLE_CTYPE double #define HAVE_FINT_IS_INT 1 #define F77_TRUE_VALUE_SET 1 #define F77_TRUE_VALUE -1 #define F77_FALSE_VALUE 0 #define HAVE_ANY_INT64_T_ALIGNMENT 1 #define HAVE_ANY_INT32_T_ALIGNMENT 1 #define HAVE_GCC_AND_PENTIUM_ASM 1 #define USE_ATOMIC_UPDATES /**/ #define STDC_HEADERS 1 #define HAVE_STDLIB_H 1 #define HAVE_STDARG_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ENDIAN_H 1 #define HAVE_ASSERT_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_SETITIMER 1 #define HAVE_ALARM 1 #define HAVE_VSNPRINTF 1 #define HAVE_VSPRINTF 1 #define HAVE_STRERROR 1 #define HAVE_STRNCASECMP 1 #define HAVE_DECL_STRERROR_R 1 #define HAVE_STRERROR_R 1 #define STRERROR_R_CHAR_P 1 #define HAVE_SNPRINTF 1 #define HAVE_QSORT 1 #define HAVE_VA_COPY 1 #define HAVE_MACRO_VA_ARGS 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STRDUP 1 #define HAVE_MKSTEMP 1 #define HAVE_FDOPEN 1 #define NEEDS_FDOPEN_DECL 1 #define HAVE_PUTENV 1 #define HAVE_GETTIMEOFDAY 1 #define MPIR_AINT_MAX INT_MAX #define SIZEOF_INT_IS_AINT 1 #define MPIR_Pint int #define MPIR_PINT_FMT_DEC_SPEC "%d" #define MPIR_Upint unsigned int #define MPIR_UPINT_FMT_DEC_SPEC "%u" #define MPIU_SIZE_T unsigned int #define SIZEOF_MPIR_BSEND_DATA_T 56 #define HAVE_PTHREAD_H 1 #define HAVE_PTHREAD_YIELD 1 #define HAVE_PTHREAD_MUTEX_RECURSIVE_NP 1 #define PTHREAD_MUTEX_ERRORCHECK_VALUE PTHREAD_MUTEX_ERRORCHECK_NP #define NEEDS_PTHREAD_MUTEXATTR_SETTYPE_DECL 1 #define MPIU_THREAD_PACKAGE_NAME MPIU_THREAD_PACKAGE_POSIX #define MPIU_TLS_SPECIFIER __thread #define HAVE_GETPID 1 #define HAVE_SCHED_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_SELECT_H 1 #define HAVE_SCHED_YIELD 1 #define HAVE_USLEEP 1 #define HAVE_SLEEP 1 #define HAVE_SELECT 1 #define USE_NOTHING_FOR_YIELD 1 #define HAVE_SCHED_SETAFFINITY 1 #define HAVE_SCHED_GETAFFINITY 1 #define HAVE_CPU_SET_T 1 #define HAVE_UNISTD_H 1 #define HAVE_STRING_H 1 #define HAVE_STDLIB_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_STRINGS_H 1 #define HAVE_ASSERT_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SNPRINTF 1 #define HAVE_STRNCASECMP 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_PARAM_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_NETINET_TCP_H 1 #define HAVE_SYS_UN_H 1 #define HAVE_NETDB_H 1 #define HAVE_SOCKET 1 #define HAVE_SETSOCKOPT 1 #define HAVE_GETHOSTBYNAME 1 #define USE_PMI_PORT 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_GCC_ATTRIBUTE 1 #define CH3_RANK_BITS 16 #define HAVE_ASSERT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_UIO_H 1 #define HAVE_UUID_UUID_H 1 #define HAVE_TIME_H 1 #define HAVE_CTYPE_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ARPA_INET_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_NET_IF_H 1 #define HAVE_INET_PTON 1 #define HAVE_GETHOSTNAME 1 #define HAVE_TIME 1 #define HAVE_NET_IF_H 1 #define HAVE_ASSERT_H 1 #define HAVE_NETDB_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SCHED_H 1 #define HAVE_SYS_MMAN_H 1 #define HAVE_SYS_IOCTL_H 1 #define HAVE_SYS_SOCKET_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_ERRNO_H 1 #define HAVE_SYS_IPC_H 1 #define HAVE_SYS_SHM_H 1 #define HAVE_NETINET_IN_H 1 #define HAVE_SIGNAL_H 1 #define HAVE_SIGNAL 1 #define HAVE_MKSTEMP 1 #define HAVE_RAND 1 #define HAVE_SRAND 1 #define HAVE_MMAP 1 #define HAVE_MUNMAP 1 #define USE_MMAP_SHM 1 #define MPID_NEM_INLINE 1 #define PREFETCH_CELL 1 #define USE_FASTBOX 1 #define HAVE_H_ADDR_LIST 1 #define HAVE_STRUCT_IFCONF 1 #define HAVE_STRUCT_IFREQ 1 #define MPID_NEM_LOCAL_LMT_IMPL MPID_NEM_LOCAL_LMT_SHM_COPY #define MPID_NEM_USE_LOCK_FREE_QUEUES 1 #define SIZEOF_OPA_PTR_T 4 #define MPIR_OFFSET_MAX LLONG_MAX #define MPIR_COUNT_MAX LLONG_MAX #define MPIR_Ucount unsigned long long #define MPIF_STATUS_SIZE 5 #define HAVE_STDIO_H 1 #define HAVE_C_MULTI_ATTR_ALIAS 1 #define HAVE_FC_TYPE_ROUTINES 1 #define HAVE_MPICHCONF 1 configure: exit 0