[mpich-commits] Build failed in Jenkins: mpich-tarball #527

Sat May 29 01:03:14 CDT 2021

See <https://jenkins-ci.cels.anl.gov/job/mpich-tarball/527/display/redirect?page=changes>

Changes:

[Kenneth J. Raffenetti] ch4/ipc: Remove unnecessary context_id->comm lookup

[Kenneth J. Raffenetti] ch4/ofi: Make huge protocol tracking lists global

[Kenneth J. Raffenetti] ch4/ofi: Reference user comm during probe

[Kenneth J. Raffenetti] ch4/ofi: Remove context_id->comm lookup in RDMA read path

[Kenneth J. Raffenetti] ch4/ofi: Remove context_id->comm lookup in huge path

[Kenneth J. Raffenetti] ch4/am: Remove MPIDIG_context_id_to_comm

[hzhou321] binding: refactor get_function_name

[hzhou321] binding: rename map_type to is_large

[hzhou321] binding: refactor get_kind_map and function_has_POLY_parameters

[hzhou321] f08: amend cdesc_create_datatype for large count

[hzhou321] f08: refactor the script to add preprocessing step

[hzhou321] f08: generate large count cdesc functions

[hzhou321] f08: add large count support

[hzhou321] f08: add large count callback function prototypes

[hzhou321] f08: skip certain large count interfaces

[hzhou321] test/f08: add test pt2pt_largef08

[hzhou321] coll: fix call_user_op_f77 in MPIR_Reduce_local

[hzhou321] coll: skip reduce of MPI_IN_PLACE with self comm

[hzhou321] python: show un-implemented API functions and some cleanup

[hzhou321] errhan: refactor call_errhandler

[hzhou321] errhan: implement session errhandler functions

[hzhou321] misc: fix usages of per comm/win/session mutex

[hzhou321] mpi: add MPIX_Session_errhandler_function declaration

[hzhou321] python: fix not replacing mpix function types

[hzhou321] fortran/f08: remove extra use of MPI_ADDRESS_KIND

[hzhou321] fortran/f08: add interface for MPI_Session_errhandler_function

[hzhou321] romio: initialize MPI_Count in all_romio_symbols

[hzhou321] romio: add large count prototypes

[hzhou321] romio: refactor poly functions to use MPIOI routines

[hzhou321] romio: add implementations of large count functions

[hzhou321] romio: add MPI_File_get_type_extent_c

[hzhou321] romio: add MPI_Register_datarep_c

[hzhou321] romio: add assertions in large count functions

[hzhou321] romio: use PMPI_Type_get_extent

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Started by an SCM change
Running as SYSTEM
[EnvInject] - Loading node environment variables.
Building remotely on compute004.mcs.anl.gov (16.04 skylake-any-version) in workspace <https://jenkins-ci.cels.anl.gov/job/mpich-tarball/ws/>
The recommended git tool is: NONE
No credentials specified
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository http://github.com/pmodels/mpich
 > git init <https://jenkins-ci.cels.anl.gov/job/mpich-tarball/ws/> # timeout=10
Fetching upstream changes from http://github.com/pmodels/mpich
 > git --version # timeout=10
 > git --version # 'git version 2.7.4'
 > git fetch --tags --progress http://github.com/pmodels/mpich +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url http://github.com/pmodels/mpich # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Seen branch in repository origin/3.1.x
Seen branch in repository origin/3.2.x
Seen branch in repository origin/3.3.x
Seen branch in repository origin/3.4.x
Seen branch in repository origin/ecp-ft
Seen branch in repository origin/main
Seen branch in repository origin/master
Seen branch in repository origin/revert-5281-2105_part
Seen 8 remote branches
 > git show-ref --tags -d # timeout=10
Checking out Revision d72be3ccc7f80427dd36e9b2a73066457cb01e0a (origin/main)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f d72be3ccc7f80427dd36e9b2a73066457cb01e0a # timeout=10
 > git branch -a -v --no-abbrev # timeout=10
 > git checkout -b main d72be3ccc7f80427dd36e9b2a73066457cb01e0a # timeout=10
Commit message: "Merge pull request #5278 from hzhou/2105_romio_large"
 > git rev-list --no-walk 4430300bb8cf02ccbd17c4192d849e7f04670444 # timeout=10
[mpich-tarball] $ /bin/bash -xe /tmp/jenkins3784155794386177091.sh
+ umask 0002
+ git config core.abbrev 12
++ uname -m
+ export PATH=/homes/MPI/software/tools/install/x86_64/bin:/homes/jain/anaconda3/bin:/homes/jain/anaconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+ PATH=/homes/MPI/software/tools/install/x86_64/bin:/homes/jain/anaconda3/bin:/homes/jain/anaconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+ BASE=/mcs/mpich/downloads/nightly
+ persist_tmp=/mcs/mpich/tmp
+ '[' -d /mcs/mpich/tmp ']'
+ create_snapshot https://raw.githubusercontent.com/pmodels/mpich/main/maint/release.pl http://github.com/pmodels/mpich main main
+ script=https://raw.githubusercontent.com/pmodels/mpich/main/maint/release.pl
+ repo=http://github.com/pmodels/mpich
+ branch=main
+ version=main
+ cd /tmp
+ /mcs/mpich/downloads/nightly/maint/release.pl --git-repo=http://github.com/pmodels/mpich --branch=main --version=main --append-commit-id
Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/\${ <-- HERE ([^ \t=:+{}]+)}/ at /homes/MPI/software/tools/install/x86_64/bin/automake line 3936.
unable to execute (cp -a doc/logging/logging.pdf /tmp/RHOLyAWiGe/mpich-main-v4.0a1-728-gd72be3c/doc/logging), $?=256.  Stopped at /mcs/mpich/downloads/nightly/maint/release.pl line 118.
cannot remove path when cwd is /tmp/RHOLyAWiGe/mpich-main-v4.0a1-728-gd72be3c-build for /tmp/RHOLyAWiGe:  at /usr/share/perl/5.22/File/Temp.pm line 778.
Build step 'Execute shell' marked build as failure