[mpich-discuss] mpich 3.0.4 build fails on OS X Mountain lion

[Jeff Hammond]

Well, assuming that the problem you see is the same as is discussed on
that website, you can:
(1) --disable-shared
(2) use llvm-gcc instead of clang
(3) upgrade to Xcode 4.5.2+

Jeff

On Wed, May 15, 2013 at 11:42 AM, Mathieu MORLIGHEM
<Mathieu.Morlighem at uci.edu> wrote:
> Hi Jeff,
>
> thanks for the link, I will try it. Does this mean that I cannot build shared libs?
> Also, this workaround is for mpich2, and the compilation with --enable-shared of mpich2 (version 1.5) works well on my machine, I tried it again this morning…
>
> Thanks
> Mathieu
>
> On May 15, 2013, at 9:33 AM, Jeff Hammond <jhammond at alcf.anl.gov> wrote:
>
>> I recall that this was addressed a month or two ago on this list but I
>> can't find the direct reference.  I can, however, point you to
>> https://github.com/mxcl/homebrew/pull/16299, which explains the
>> details and how you can work around it.
>>
>> Jeff
>>
>> On Wed, May 15, 2013 at 11:28 AM, Mathieu MORLIGHEM
>> <Mathieu.Morlighem at uci.edu> wrote:
>>> Hello,
>>>
>>> I am trying to compile mpich 3.0.4 on my machine:
>>>
>>> uname -a
>>> Darwin shackleton.ess.uci.edu 12.3.0 Darwin Kernel Version 12.3.0: Sun Jan
>>> 6 22:37:10 PST 2013; root:xnu-2050.22.13~1/RELEASE_X86_64 x86_64
>>>
>>> I successfully installed mpich 1.5 several times with the following options:
>>> ./configure --prefix="$ISSM_DIR/externalpackages/mpich2/install"
>>> --enable-shared
>>>
>>> However, with the same options, the build of mpich 3.0.4 at linking with a
>>> segmentation fault:
>>>
>>> Making all in .
>>> make[3]: Nothing to be done for `all-am'.
>>> Making all in .
>>>  GEN      lib/libmpich.la
>>> collect2: ld terminated with signal 11 [Segmentation fault: 11]
>>> make[2]: *** [lib/libmpich.la] Error 1
>>> make[1]: *** [all-recursive] Error 1
>>> make: *** [all] Error 2
>>>
>>> with VERBOSE=1:
>>> /bin/sh ./libtool  --tag=F77   --mode=link gfortran  -O2 -L./src/mpl
>>> -L./src/openpa/src -version-info 10:4:0 -Wl,-flat_namespace -o
>>> lib/libmpich.la -rpath
>>> /Users/mmorligh/Desktop/issmuci/trunk-jpl/externalpackages/mpich/install/lib
>>> src/mpi/attr/attrutil.lo src/mpi/attr/dup_fn.lo src/mpi/coll/allred_group.lo
>>> src/mpi/coll/barrier_group.lo ………… src/mpi_t/.libs/pvar_stop.o
>>> src/mpi_t/.libs/pvar_write.o src/binding/f77/.libs/setbot.o
>>> src/binding/f77/.libs/setbotf.o
>>> -Wl,-force_load,src/mpi/romio/.libs/libromio.a
>>> -Wl,-force_load,src/mpi/romio/.libs/libpromio.a  -L./src/mpl
>>> -L./src/openpa/src
>>> /Users/mmorligh/Desktop/issmuci/trunk-jpl/externalpackages/mpich/src/src/mpl/.libs/libmpl.dylib
>>> /Users/mmorligh/Desktop/issmuci/trunk-jpl/externalpackages/mpich/src/src/openpa/src/.libs/libopa.dylib
>>> -lpthread  -O2 -Wl,-flat_namespace   -install_name
>>> /Users/mmorligh/Desktop/issmuci/trunk-jpl/externalpackages/mpich/install/lib/libmpich.10.dylib
>>> -compatibility_version 11 -current_version 11.4 -Wl,-single_module
>>> collect2: ld terminated with signal 11 [Segmentation fault: 11]
>>> make[2]: *** [lib/libmpich.la] Error 1
>>> make[1]: *** [all-recursive] Error 1
>>> make: *** [all] Error 2
>>>
>>> Has anybody reported a similar issue? Do you think this is a problem with
>>> libtool?
>>> Thanks a lot for your help
>>>
>>> --
>>> Mathieu Morlighem
>>>
>>> Assistant Project Scientist
>>> Department of Earth System Science
>>> University of California, Irvine
>>>
>>>
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>>
>>
>>
>> --
>> Jeff Hammond
>> Argonne Leadership Computing Facility
>> University of Chicago Computation Institute
>> jhammond at alcf.anl.gov / (630) 252-5381
>> http://www.linkedin.com/in/jeffhammond
>> https://wiki.alcf.anl.gov/parts/index.php/User:Jhammond
>> ALCF docs: http://www.alcf.anl.gov/user-guides
>> _______________________________________________
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>>
>
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-- 
Jeff Hammond
Argonne Leadership Computing Facility
University of Chicago Computation Institute
jhammond at alcf.anl.gov / (630) 252-5381
http://www.linkedin.com/in/jeffhammond
https://wiki.alcf.anl.gov/parts/index.php/User:Jhammond
ALCF docs: http://www.alcf.anl.gov/user-guides