[mpich-discuss] mpich2 installation fails

bhimashankar dhappadhule dhappabn at gmail.com
Tue Oct 22 06:59:06 CDT 2013


sir ,
            while installing mpich2 on ubuntu 13.04 ,configuration
successfully done but at time  of command '' make ",i get error like shown
in attachment.I urgently required your help sir.
Thank you...!   waiting for reply.
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make  all-recursive
make[1]: Entering directory `/home/shankar/Downloads/mpich-3.0.4'
Making all in src/mpl
make[2]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/mpl'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/mpl'
Making all in src/openpa
make[2]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa'
Making all in src
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa/src'
make  all-am
make[4]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa/src'
make[4]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa/src'
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa/src'
Making all in test
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa/test'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa/test'
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa'
make[2]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/openpa'
Making all in src/mpi/romio
make[2]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/mpi/romio'
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/mpi/romio'
  CC       mpi-io/close.lo
  CC       mpi-io/delete.lo
  CC       mpi-io/file_c2f.lo
  CC       mpi-io/file_f2c.lo
  CC       mpi-io/fsync.lo
  CC       mpi-io/get_amode.lo
  CC       mpi-io/get_atom.lo
  CC       mpi-io/get_bytoff.lo
  CC       mpi-io/get_extent.lo
  CC       mpi-io/get_group.lo
  CC       mpi-io/get_info.lo
  CC       mpi-io/get_posn.lo
  CC       mpi-io/get_posn_sh.lo
  CC       mpi-io/get_size.lo
  CC       mpi-io/get_view.lo
  CC       mpi-io/iread.lo
  CC       mpi-io/iread_at.lo
  CC       mpi-io/iread_sh.lo
  CC       mpi-io/iwrite.lo
  CC       mpi-io/iwrite_at.lo
  CC       mpi-io/iwrite_sh.lo
  CC       mpi-io/open.lo
  CC       mpi-io/prealloc.lo
  CC       mpi-io/rd_atallb.lo
  CC       mpi-io/rd_atalle.lo
  CC       mpi-io/read.lo
  CC       mpi-io/read_all.lo
  CC       mpi-io/read_allb.lo
  CC       mpi-io/read_alle.lo
  CC       mpi-io/read_at.lo
  CC       mpi-io/read_atall.lo
  CC       mpi-io/read_ord.lo
  CC       mpi-io/read_ordb.lo
  CC       mpi-io/read_orde.lo
  CC       mpi-io/read_sh.lo
  CC       mpi-io/register_datarep.lo
  CC       mpi-io/seek.lo
  CC       mpi-io/seek_sh.lo
  CC       mpi-io/set_atom.lo
  CC       mpi-io/set_info.lo
  CC       mpi-io/set_size.lo
  CC       mpi-io/set_view.lo
  CC       mpi-io/wr_atallb.lo
  CC       mpi-io/wr_atalle.lo
  CC       mpi-io/write.lo
  CC       mpi-io/write_all.lo
  CC       mpi-io/write_allb.lo
  CC       mpi-io/write_alle.lo
  CC       mpi-io/write_at.lo
  CC       mpi-io/write_atall.lo
  CC       mpi-io/write_ord.lo
  CC       mpi-io/write_ordb.lo
  CC       mpi-io/write_orde.lo
  CC       mpi-io/write_sh.lo
  CC       mpi-io/glue/mpich/mpio_file.lo
  CC       mpi-io/glue/mpich/mpio_err.lo
  CC       mpi-io/mpich_fileutil.lo
  CC       mpi-io/mpir-mpioinit.lo
  CC       mpi-io/mpiu_greq.lo
  CC       mpi-io/mpiu_external32.lo
  CC       adio/ad_nfs/ad_nfs_read.lo
  CC       adio/ad_nfs/ad_nfs_open.lo
  CC       adio/ad_nfs/ad_nfs_write.lo
  CC       adio/ad_nfs/ad_nfs_done.lo
  CC       adio/ad_nfs/ad_nfs_fcntl.lo
  CC       adio/ad_nfs/ad_nfs_iread.lo
  CC       adio/ad_nfs/ad_nfs_iwrite.lo
  CC       adio/ad_nfs/ad_nfs_wait.lo
  CC       adio/ad_nfs/ad_nfs_setsh.lo
  CC       adio/ad_nfs/ad_nfs_getsh.lo
  CC       adio/ad_nfs/ad_nfs.lo
  CC       adio/ad_nfs/ad_nfs_resize.lo
  CC       adio/ad_nfs/ad_nfs_features.lo
  CC       adio/ad_testfs/ad_testfs_close.lo
  CC       adio/ad_testfs/ad_testfs_read.lo
  CC       adio/ad_testfs/ad_testfs_rdcoll.lo
  CC       adio/ad_testfs/ad_testfs_wrcoll.lo
  CC       adio/ad_testfs/ad_testfs_open.lo
  CC       adio/ad_testfs/ad_testfs_write.lo
  CC       adio/ad_testfs/ad_testfs_done.lo
  CC       adio/ad_testfs/ad_testfs_fcntl.lo
  CC       adio/ad_testfs/ad_testfs_iread.lo
  CC       adio/ad_testfs/ad_testfs_iwrite.lo
  CC       adio/ad_testfs/ad_testfs_wait.lo
  CC       adio/ad_testfs/ad_testfs_flush.lo
  CC       adio/ad_testfs/ad_testfs_seek.lo
  CC       adio/ad_testfs/ad_testfs_resize.lo
  CC       adio/ad_testfs/ad_testfs_hints.lo
  CC       adio/ad_testfs/ad_testfs_delete.lo
  CC       adio/ad_testfs/ad_testfs.lo
  CC       adio/ad_ufs/ad_ufs.lo
  CC       adio/ad_ufs/ad_ufs_open.lo
  CC       adio/common/ad_aggregate.lo
  CC       adio/common/ad_aggregate_new.lo
  CC       adio/common/ad_close.lo
  CC       adio/common/ad_coll_build_req_new.lo
  CC       adio/common/ad_coll_exch_new.lo
  CC       adio/common/ad_darray.lo
  CC       adio/common/ad_delete.lo
  CC       adio/common/ad_done.lo
  CC       adio/common/ad_done_fake.lo
  CC       adio/common/ad_end.lo
  CC       adio/common/ad_fcntl.lo
  CC       adio/common/ad_features.lo
  CC       adio/common/ad_flush.lo
  CC       adio/common/ad_fstype.lo
  CC       adio/common/ad_get_sh_fp.lo
  CC       adio/common/ad_hints.lo
  CC       adio/common/ad_init.lo
  CC       adio/common/ad_io_coll.lo
  CC       adio/common/ad_iopen.lo
  CC       adio/common/ad_iread.lo
  CC       adio/common/ad_iread_fake.lo
  CC       adio/common/ad_iwrite.lo
  CC       adio/common/ad_iwrite_fake.lo
  CC       adio/common/ad_open.lo
  CC       adio/common/ad_opencoll.lo
  CC       adio/common/ad_opencoll_failsafe.lo
  CC       adio/common/ad_opencoll_scalable.lo
  CC       adio/common/ad_prealloc.lo
  CC       adio/common/ad_read.lo
  CC       adio/common/ad_read_coll.lo
  CC       adio/common/ad_read_str.lo
  CC       adio/common/ad_read_str_naive.lo
  CC       adio/common/ad_resize.lo
  CC       adio/common/ad_seek.lo
  CC       adio/common/ad_set_sh_fp.lo
  CC       adio/common/ad_set_view.lo
  CC       adio/common/ad_subarray.lo
  CC       adio/common/ad_wait.lo
  CC       adio/common/ad_wait_fake.lo
  CC       adio/common/ad_write.lo
  CC       adio/common/ad_write_coll.lo
  CC       adio/common/ad_write_nolock.lo
  CC       adio/common/ad_write_str.lo
  CC       adio/common/ad_write_str_naive.lo
  CC       adio/common/adi_close.lo
  CC       adio/common/byte_offset.lo
  CC       adio/common/cb_config_list.lo
  CC       adio/common/eof_offset.lo
  CC       adio/common/error.lo
  CC       adio/common/flatten.lo
  CC       adio/common/get_fp_posn.lo
  CC       adio/common/greq_fns.lo
  CC       adio/common/heap-sort.lo
  CC       adio/common/iscontig.lo
  CC       adio/common/lock.lo
  CC       adio/common/malloc.lo
  CC       adio/common/shfp_fname.lo
  CC       adio/common/status_setb.lo
  CC       adio/common/strfns.lo
  CC       adio/common/system_hints.lo
  CCLD     libromio.la
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/mpi/romio'
make[2]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/mpi/romio'
Making all in src/pm/hydra
make[2]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra'
Making all in ../../mpl
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/mpl'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/mpl'
Making all in tools/topo/hwloc/hwloc
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc'
Making all in src
make[4]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
make[5]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
  CC       components.lo
  CCLD     libhwloc_embedded.la
make[5]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
make[4]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
Making all in include
make[4]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/include'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/include'
make[4]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc'
make[4]: Nothing to be done for `all-am'.
make[4]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc'
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc'
Making all in .
make[3]: Entering directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra'
  CC       alloc.lo
  CC       args.lo
  CC       dbg.lo
  CC       env.lo
  CC       launch.lo
  CC       others.lo
  CC       signals.lo
  CC       sock.lo
  CC       string.lo
  CC       topo.lo
  CC       topo_hwloc.lo
  CC       bsci_init.lo
  CC       bsci_finalize.lo
  CC       bsci_launch.lo
  CC       bsci_query_node_list.lo
  CC       bsci_query_proxy_id.lo
  CC       bsci_query_native_int.lo
  CC       bsci_wait.lo
  CC       bsci_env.lo
  CC       bscu_wait.lo
  CC       bscu_cb.lo
  CC       external_common.lo
  CC       external_common_launch.lo
  CC       fork_init.lo
  CC       user_init.lo
  CC       manual_init.lo
  CC       rsh_init.lo
  CC       rsh_env.lo
  CC       ssh_init.lo
  CC       ssh.lo
  CC       ssh_env.lo
  CC       ssh_finalize.lo
  CC       slurm_init.lo
  CC       slurm_launch.lo
  CC       slurm_env.lo
  CC       slurm_query_native_int.lo
  CC       slurm_query_node_list.lo
  CC       slurm_query_proxy_id.lo
  CC       ll_init.lo
  CC       ll_launch.lo
  CC       ll_query_native_int.lo
  CC       ll_query_node_list.lo
  CC       ll_query_proxy_id.lo
  CC       ll_env.lo
  CC       lsf_init.lo
  CC       lsf_query_native_int.lo
  CC       lsf_query_node_list.lo
  CC       lsf_env.lo
  CC       sge_init.lo
  CC       sge_query_native_int.lo
  CC       sge_query_node_list.lo
  CC       sge_env.lo
  CC       pbs_init.lo
  CC       pbs_query_native_int.lo
  CC       pbs_query_node_list.lo
  CC       cobalt_init.lo
  CC       cobalt_query_native_int.lo
  CC       cobalt_query_node_list.lo
  CC       persist_init.lo
  CC       persist_launch.lo
  CC       persist_wait.lo
  CC       ckpoint.lo
  CC       ckpoint_blcr.lo
  CC       demux.lo
  CC       demux_poll.lo
  CC       demux_select.lo
  CC       debugger.lo
  CC       hydt_ftb_dummy.lo
  CC       uiu.lo
  CCLD     libhydra.la
  CC       pmiserv_pmi.lo
  CC       pmiserv_pmi_v1.lo
  CC       pmiserv_pmi_v2.lo
  CC       pmiserv_pmci.lo
  CC       pmiserv_cb.lo
  CC       pmiserv_utils.lo
  CC       common.lo
  CC       pmi_v2_common.lo
  CCLD     libpm.la
  CC       hydra_persist-persist_server.o
  CCLD     hydra_persist
  CC       hydra_nameserver-hydra_nameserver.o
  CCLD     hydra_nameserver
  CC       hydra_pmi_proxy-pmip.o
  CC       hydra_pmi_proxy-pmip_cb.o
  CC       hydra_pmi_proxy-pmip_utils.o
  CC       hydra_pmi_proxy-pmip_pmi_v1.o
  CC       hydra_pmi_proxy-pmip_pmi_v2.o
  CC       hydra_pmi_proxy-common.o
  CC       hydra_pmi_proxy-pmi_v2_common.o
  CCLD     hydra_pmi_proxy
  CC       mpiexec.o
  CC       utils.o
  CCLD     mpiexec.hydra
make[3]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra'
make[2]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4/src/pm/hydra'
Making all in .
make[2]: Entering directory `/home/shankar/Downloads/mpich-3.0.4'
  CC       src/mpi/attr/attrutil.lo
  CC       src/mpi/attr/dup_fn.lo
  CC       src/mpi/coll/allred_group.lo
  CC       src/mpi/coll/barrier_group.lo
  CC       src/mpi/coll/helper_fns.lo
  CC       src/mpi/coll/opsum.lo
  CC       src/mpi/coll/opmax.lo
  CC       src/mpi/coll/opmin.lo
  CC       src/mpi/coll/opband.lo
  CC       src/mpi/coll/opbor.lo
  CC       src/mpi/coll/opbxor.lo
  CC       src/mpi/coll/opland.lo
  CC       src/mpi/coll/oplor.lo
  CC       src/mpi/coll/oplxor.lo
  CC       src/mpi/coll/opprod.lo
  CC       src/mpi/coll/opminloc.lo
  CC       src/mpi/coll/opmaxloc.lo
  CC       src/mpi/coll/opno_op.lo
  CC       src/mpi/coll/opreplace.lo
  CC       src/mpi/coll/nbcutil.lo
  CC       src/mpi/comm/commutil.lo
  CC       src/mpi/datatype/typeutil.lo
  CC       src/mpi/errhan/errutil.lo
  CC       src/mpi/errhan/dynerrutil.lo
  CC       src/mpi/group/grouputil.lo
  CC       src/mpi/info/infoutil.lo
  CC       src/mpi/init/initinfo.lo
  CC       src/mpi/init/async.lo
  CC       src/mpi/pt2pt/bsendutil.lo
  CC       src/mpi/pt2pt/mpir_request.lo
  CC       src/mpi/rma/winutil.lo
  CC       src/mpi/rma/rmatypeutil.lo
  CC       src/mpi/timer/mpidtime.lo
  CC       src/mpi/topo/topoutil.lo
  CC       src/util/dbg/dbg_printf.lo
  CC       src/util/dbg/timelimit.lo
  CC       src/util/instrm/states.lo
  CC       src/util/instrm/instr.lo
  CC       src/util/mem/trmem.lo
  CC       src/util/mem/handlemem.lo
  CC       src/util/mem/strerror.lo
  CC       src/util/other/outliers.lo
  CC       src/util/other/assert.lo
  CC       src/util/param/param_vals.lo
  CC       src/util/procmap/local_proc.lo
  CC       src/binding/f77/sendf.lo
  CC       src/binding/f77/recvf.lo
  CC       src/binding/f77/get_countf.lo
  CC       src/binding/f77/bsendf.lo
  CC       src/binding/f77/ssendf.lo
  CC       src/binding/f77/rsendf.lo
  CC       src/binding/f77/bufattachf.lo
  CC       src/binding/f77/bufdetachf.lo
  CC       src/binding/f77/isendf.lo
  CC       src/binding/f77/ibsendf.lo
  CC       src/binding/f77/issendf.lo
  CC       src/binding/f77/irsendf.lo
  CC       src/binding/f77/irecvf.lo
  CC       src/binding/f77/waitf.lo
  CC       src/binding/f77/testf.lo
  CC       src/binding/f77/request_freef.lo
  CC       src/binding/f77/waitanyf.lo
  CC       src/binding/f77/testanyf.lo
  CC       src/binding/f77/waitallf.lo
  CC       src/binding/f77/testallf.lo
  CC       src/binding/f77/waitsomef.lo
  CC       src/binding/f77/testsomef.lo
  CC       src/binding/f77/iprobef.lo
  CC       src/binding/f77/probef.lo
  CC       src/binding/f77/cancelf.lo
  CC       src/binding/f77/testcancelf.lo
  CC       src/binding/f77/send_initf.lo
  CC       src/binding/f77/bsend_initf.lo
  CC       src/binding/f77/ssend_initf.lo
  CC       src/binding/f77/rsend_initf.lo
  CC       src/binding/f77/recv_initf.lo
  CC       src/binding/f77/startf.lo
  CC       src/binding/f77/startallf.lo
  CC       src/binding/f77/sendrecvf.lo
  CC       src/binding/f77/sndrcvrplf.lo
  CC       src/binding/f77/typecontigf.lo
  CC       src/binding/f77/type_vectorf.lo
  CC       src/binding/f77/type_hvectorf.lo
  CC       src/binding/f77/type_indexedf.lo
  CC       src/binding/f77/type_hindexedf.lo
  CC       src/binding/f77/type_structf.lo
  CC       src/binding/f77/type_extentf.lo
  CC       src/binding/f77/type_sizef.lo
  CC       src/binding/f77/type_lbf.lo
  CC       src/binding/f77/type_ubf.lo
  CC       src/binding/f77/type_commitf.lo
  CC       src/binding/f77/type_freef.lo
  CC       src/binding/f77/get_elementsf.lo
  CC       src/binding/f77/packf.lo
  CC       src/binding/f77/unpackf.lo
  CC       src/binding/f77/pack_sizef.lo
  CC       src/binding/f77/barrierf.lo
  CC       src/binding/f77/bcastf.lo
  CC       src/binding/f77/gatherf.lo
  CC       src/binding/f77/gathervf.lo
  CC       src/binding/f77/scatterf.lo
  CC       src/binding/f77/scattervf.lo
  CC       src/binding/f77/allgatherf.lo
  CC       src/binding/f77/allgathervf.lo
  CC       src/binding/f77/alltoallf.lo
  CC       src/binding/f77/alltoallvf.lo
  CC       src/binding/f77/alltoallwf.lo
  CC       src/binding/f77/exscanf.lo
  CC       src/binding/f77/reducef.lo
  CC       src/binding/f77/op_createf.lo
  CC       src/binding/f77/op_freef.lo
  CC       src/binding/f77/allreducef.lo
  CC       src/binding/f77/redscatf.lo
  CC       src/binding/f77/scanf.lo
  CC       src/binding/f77/group_sizef.lo
  CC       src/binding/f77/group_rankf.lo
  CC       src/binding/f77/grouptranksf.lo
  CC       src/binding/f77/group_comparef.lo
  CC       src/binding/f77/comm_groupf.lo
  CC       src/binding/f77/group_unionf.lo
  CC       src/binding/f77/groupinterf.lo
  CC       src/binding/f77/groupdifff.lo
  CC       src/binding/f77/group_inclf.lo
  CC       src/binding/f77/group_exclf.lo
  CC       src/binding/f77/grouprinclf.lo
  CC       src/binding/f77/grouprexclf.lo
  CC       src/binding/f77/group_freef.lo
  CC       src/binding/f77/comm_sizef.lo
  CC       src/binding/f77/comm_rankf.lo
  CC       src/binding/f77/comm_comparef.lo
  CC       src/binding/f77/comm_dupf.lo
  CC       src/binding/f77/comm_dup_with_infof.lo
  CC       src/binding/f77/comm_createf.lo
  CC       src/binding/f77/comm_splitf.lo
  CC       src/binding/f77/comm_freef.lo
  CC       src/binding/f77/commtesticf.lo
  CC       src/binding/f77/commrsizef.lo
  CC       src/binding/f77/commrgroupf.lo
  CC       src/binding/f77/iccreatef.lo
  CC       src/binding/f77/icmergef.lo
  CC       src/binding/f77/keyval_freef.lo
  CC       src/binding/f77/attr_putf.lo
  CC       src/binding/f77/attr_getf.lo
  CC       src/binding/f77/attr_deletef.lo
  CC       src/binding/f77/topo_testf.lo
  CC       src/binding/f77/cart_createf.lo
  CC       src/binding/f77/dims_createf.lo
  CC       src/binding/f77/graph_createf.lo
  CC       src/binding/f77/graphdims_getf.lo
  CC       src/binding/f77/graph_getf.lo
  CC       src/binding/f77/cartdim_getf.lo
  CC       src/binding/f77/cart_getf.lo
  CC       src/binding/f77/cart_rankf.lo
  CC       src/binding/f77/cart_coordsf.lo
  CC       src/binding/f77/grfnbcountf.lo
  CC       src/binding/f77/grfnbrsf.lo
  CC       src/binding/f77/cart_shiftf.lo
  CC       src/binding/f77/cart_subf.lo
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  CC       src/binding/f90/create_f90_real.lo
src/binding/f90/create_f90_real.c: In function 'PMPI_Type_create_f90_real':
src/binding/f90/create_f90_real.c:73:23: error: expected expression before ',' token
src/binding/f90/create_f90_real.c:74:25: error: expected expression before ',' token
make[2]: *** [src/binding/f90/create_f90_real.lo] Error 1
make[2]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/shankar/Downloads/mpich-3.0.4'
make: *** [all] Error 2


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