[mpich-discuss] Mpich 3.0.4 fails to compile on 32 bit Arch Linux
Mark E. Lee
mark at markelee.com
Thu Oct 31 21:05:55 CDT 2013
Salutations!
Find attached to this message my config.log and m.txt
Regards,
Mark
>Hi Mark,
>
>When reporting installation problems, we need you to also include full
>configure and make logs (config.log and m.txt). Please refer to
>http://www.mpich.org/static/downloads/3.0.4/mpich-3.0.4-installguide.pdf
>
>Best,
> Antonio
>
>
>On Thursday, October 31, 2013 06:14:15 PM Mark E. Lee wrote:
>> Salutations!
>>
>> I get an error while compiling mpich-3.0.4 on 32-bit Arch Linux with
>>GCC
>> 4.8.2-3 (from Arch official repositories). I am getting the following
>> error:
>>
>> /home/test/build/src/mpich-3.0.5/src/pm/hydra/tools/topo/hwloc/hwloc/include
>> /private/cpuid.h:39: Error: symbol 'Lhwloc1' is already defined
>> Makefile:708: recipe for target 'topology-x86.lo' failed
>>
>> Any help would be greatly appreciated!
>>
>> Regards,
>> Mark
--
Mark E. Lee <mark at markelee.com>
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make all-recursive
make[1]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4'
Making all in src/mpl
make[2]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpl'
CC mplstr.lo
CC mpltrmem.lo
CC mplenv.lo
CCLD libmpl.la
make[2]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpl'
Making all in src/openpa
make[2]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa'
Making all in src
make[3]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa/src'
make all-am
make[4]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa/src'
CC opa_primitives.lo
CC opa_queue.lo
CCLD libopa.la
make[4]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa/src'
make[3]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa/src'
Making all in test
make[3]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa/test'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa/test'
make[3]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa'
make[2]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/openpa'
Making all in src/mpi/romio
make[2]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpi/romio'
make[3]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpi/romio'
CC mpi-io/close.lo
CC mpi-io/delete.lo
CC mpi-io/file_c2f.lo
CC mpi-io/file_f2c.lo
CC mpi-io/fsync.lo
CC mpi-io/get_amode.lo
CC mpi-io/get_atom.lo
CC mpi-io/get_bytoff.lo
CC mpi-io/get_extent.lo
CC mpi-io/get_group.lo
CC mpi-io/get_info.lo
CC mpi-io/get_posn.lo
CC mpi-io/get_posn_sh.lo
CC mpi-io/get_size.lo
CC mpi-io/get_view.lo
CC mpi-io/iread.lo
CC mpi-io/iread_at.lo
CC mpi-io/iread_sh.lo
CC mpi-io/iwrite.lo
CC mpi-io/iwrite_at.lo
CC mpi-io/iwrite_sh.lo
CC mpi-io/open.lo
CC mpi-io/prealloc.lo
CC mpi-io/rd_atallb.lo
CC mpi-io/rd_atalle.lo
CC mpi-io/read.lo
CC mpi-io/read_all.lo
CC mpi-io/read_allb.lo
CC mpi-io/read_alle.lo
CC mpi-io/read_at.lo
CC mpi-io/read_atall.lo
CC mpi-io/read_ord.lo
CC mpi-io/read_ordb.lo
CC mpi-io/read_orde.lo
CC mpi-io/read_sh.lo
CC mpi-io/register_datarep.lo
CC mpi-io/seek.lo
CC mpi-io/seek_sh.lo
CC mpi-io/set_atom.lo
CC mpi-io/set_info.lo
CC mpi-io/set_size.lo
CC mpi-io/set_view.lo
CC mpi-io/wr_atallb.lo
CC mpi-io/wr_atalle.lo
CC mpi-io/write.lo
CC mpi-io/write_all.lo
CC mpi-io/write_allb.lo
CC mpi-io/write_alle.lo
CC mpi-io/write_at.lo
CC mpi-io/write_atall.lo
CC mpi-io/write_ord.lo
CC mpi-io/write_ordb.lo
CC mpi-io/write_orde.lo
CC mpi-io/write_sh.lo
CC mpi-io/glue/mpich/mpio_file.lo
CC mpi-io/glue/mpich/mpio_err.lo
CC mpi-io/mpich_fileutil.lo
CC mpi-io/mpir-mpioinit.lo
CC mpi-io/mpiu_greq.lo
CC mpi-io/mpiu_external32.lo
CC adio/ad_nfs/ad_nfs_read.lo
CC adio/ad_nfs/ad_nfs_open.lo
CC adio/ad_nfs/ad_nfs_write.lo
CC adio/ad_nfs/ad_nfs_done.lo
CC adio/ad_nfs/ad_nfs_fcntl.lo
CC adio/ad_nfs/ad_nfs_iread.lo
CC adio/ad_nfs/ad_nfs_iwrite.lo
CC adio/ad_nfs/ad_nfs_wait.lo
CC adio/ad_nfs/ad_nfs_setsh.lo
CC adio/ad_nfs/ad_nfs_getsh.lo
CC adio/ad_nfs/ad_nfs.lo
CC adio/ad_nfs/ad_nfs_resize.lo
CC adio/ad_nfs/ad_nfs_features.lo
CC adio/ad_testfs/ad_testfs_close.lo
CC adio/ad_testfs/ad_testfs_read.lo
CC adio/ad_testfs/ad_testfs_rdcoll.lo
CC adio/ad_testfs/ad_testfs_wrcoll.lo
CC adio/ad_testfs/ad_testfs_open.lo
CC adio/ad_testfs/ad_testfs_write.lo
CC adio/ad_testfs/ad_testfs_done.lo
CC adio/ad_testfs/ad_testfs_fcntl.lo
CC adio/ad_testfs/ad_testfs_iread.lo
CC adio/ad_testfs/ad_testfs_iwrite.lo
CC adio/ad_testfs/ad_testfs_wait.lo
CC adio/ad_testfs/ad_testfs_flush.lo
CC adio/ad_testfs/ad_testfs_seek.lo
CC adio/ad_testfs/ad_testfs_resize.lo
CC adio/ad_testfs/ad_testfs_hints.lo
CC adio/ad_testfs/ad_testfs_delete.lo
CC adio/ad_testfs/ad_testfs.lo
CC adio/ad_ufs/ad_ufs.lo
CC adio/ad_ufs/ad_ufs_open.lo
CC adio/common/ad_aggregate.lo
CC adio/common/ad_aggregate_new.lo
CC adio/common/ad_close.lo
CC adio/common/ad_coll_build_req_new.lo
CC adio/common/ad_coll_exch_new.lo
CC adio/common/ad_darray.lo
CC adio/common/ad_delete.lo
CC adio/common/ad_done.lo
CC adio/common/ad_done_fake.lo
CC adio/common/ad_end.lo
CC adio/common/ad_fcntl.lo
CC adio/common/ad_features.lo
CC adio/common/ad_flush.lo
CC adio/common/ad_fstype.lo
CC adio/common/ad_get_sh_fp.lo
CC adio/common/ad_hints.lo
CC adio/common/ad_init.lo
CC adio/common/ad_io_coll.lo
CC adio/common/ad_iopen.lo
CC adio/common/ad_iread.lo
CC adio/common/ad_iread_fake.lo
CC adio/common/ad_iwrite.lo
CC adio/common/ad_iwrite_fake.lo
CC adio/common/ad_open.lo
CC adio/common/ad_opencoll.lo
CC adio/common/ad_opencoll_failsafe.lo
CC adio/common/ad_opencoll_scalable.lo
CC adio/common/ad_prealloc.lo
CC adio/common/ad_read.lo
CC adio/common/ad_read_coll.lo
CC adio/common/ad_read_str.lo
CC adio/common/ad_read_str_naive.lo
CC adio/common/ad_resize.lo
CC adio/common/ad_seek.lo
CC adio/common/ad_set_sh_fp.lo
CC adio/common/ad_set_view.lo
CC adio/common/ad_subarray.lo
CC adio/common/ad_wait.lo
CC adio/common/ad_wait_fake.lo
CC adio/common/ad_write.lo
CC adio/common/ad_write_coll.lo
CC adio/common/ad_write_nolock.lo
CC adio/common/ad_write_str.lo
CC adio/common/ad_write_str_naive.lo
CC adio/common/adi_close.lo
CC adio/common/byte_offset.lo
CC adio/common/cb_config_list.lo
CC adio/common/eof_offset.lo
CC adio/common/error.lo
CC adio/common/flatten.lo
CC adio/common/get_fp_posn.lo
CC adio/common/greq_fns.lo
CC adio/common/heap-sort.lo
CC adio/common/iscontig.lo
CC adio/common/lock.lo
CC adio/common/malloc.lo
CC adio/common/shfp_fname.lo
CC adio/common/status_setb.lo
CC adio/common/strfns.lo
CC adio/common/system_hints.lo
CCLD libromio.la
make[3]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpi/romio'
make[2]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpi/romio'
Making all in src/pm/hydra
make[2]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra'
Making all in ../../mpl
make[3]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpl'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/mpl'
Making all in tools/topo/hwloc/hwloc
make[3]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc'
Making all in src
make[4]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
make[5]: Entering directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
CC topology.lo
CC traversal.lo
CC distances.lo
CC components.lo
CC bind.lo
CC bitmap.lo
CC misc.lo
CC base64.lo
CC topology-noos.lo
CC topology-synthetic.lo
CC topology-custom.lo
CC topology-xml.lo
CC topology-xml-nolibxml.lo
CC topology-linux.lo
CC topology-x86.lo
/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/include/private/cpuid.h: Assembler messages:
/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/include/private/cpuid.h:39: Error: symbol `Lhwloc1' is already defined
Makefile:708: recipe for target 'topology-x86.lo' failed
make[5]: *** [topology-x86.lo] Error 1
make[5]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
Makefile:762: recipe for target 'all-recursive' failed
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc/src'
Makefile:455: recipe for target 'all-recursive' failed
make[3]: *** [all-recursive] Error 1
make[3]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra/tools/topo/hwloc/hwloc'
Makefile:1808: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4/src/pm/hydra'
Makefile:23607: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory '/home/test/build/mpich3/src/mpich-3.0.4'
Makefile:6706: recipe for target 'all' failed
make: *** [all] Error 2
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