[mpich-discuss] Problem installing and using MPE
Fateme Hendijani
fateme.hendijani at gmail.com
Wed Dec 17 14:52:22 CST 2014
Thank you very much for all of your replies. finally, I used the version in
https://wiki.mpich.org/mpich/index.php/MPE_by_example
and could successfully execute both.
Best,
Fatemeh
On Tue, Dec 16, 2014 at 2:59 PM, Balaji, Pavan <balaji at anl.gov> wrote:
>
>
> Just to clarify -- MPE is a separate project than MPICH. We were
> originally integrating it into the MPICH tarball as well. We now ditribute
> it separately.
>
> -- Pavan
>
> > On Dec 16, 2014, at 9:07 AM, Lu, Huiwei <huiweilu at mcs.anl.gov> wrote:
> >
> > Hi, Fateme,
> >
> > Unfortunately MPICH has removed MPE support since 2012.
> >
> > If you want to log events for debugging, you can check
> http://wiki.mpich.org/mpich/index.php/Debug_Event_Logging for an
> alternative.
> > If you want to profile MPI with event logging, you may want to take a
> look at MPI Tool support (
> http://wiki.mpich.org/mpich/index.php/Tool_interfaces_(MPI-T),_MPICH_parameters_and_instrumentation)
> or profiling tools like HPCToolkit and TAU that work with MPICH.
> >
> > Best,
> > —
> > Huiwei
> >
> >> On Dec 15, 2014, at 12:50 PM, Fateme Hendijani <
> fateme.hendijani at gmail.com> wrote:
> >>
> >> Hello,
> >>
> >> I am a newbie in MPI. I have installed MPICH-3.0.4 on my virtual
> machine, Ubuntu 14.04. It runs the cpi example and also compiles and runs
> the sample Hello World example.
> >> I need to create log files, using MPE. In the manuals, it is said that
> the MPE is included in MPICH, however, it is not. Therefore, I have
> installed the MPE2-1.3.0 with the following configuration options:
> >> sudo ./configure –prefix=/path/to/install/
> --with-mpicc=/mirror/mpich2/bin/mpicc --with-mpilibs=-L/mirror/mpich2/lib/
> --with-mpiinc=-I/mirror/mpich2/include/ --disable-f77 –enable-mpe_graphics
> –enable-mpedbg –enable-mpich –with-mpiio –enable-checkMPIwtime
> >>
> >> I had actually disabled the mpedbg, since while making, it went to a
> loop that could not find it.
> >>
> >> While using make command, it gave me some errors and warnings like the
> following. I have set the LD_LIBRARY_PATH and LIBRARY_PATH, but still
> cannot create a log file.
> >>
> >> 1- I don't know which version of MPICH and MPE to use, and from where
> to download (I have found and MPICH2 that has an MPE folder inside,
> however, some libs seem to be missing)
> >>
> >> 2- I appreciate your help for installing.
> >>
> >> Thanks,
> >>
> >> Fatemeh
> >>
> >>
> >>
> >> In file included from log_mpi_core.c:6997:0:
> >> log_mpi_io.c:1590:5: error: conflicting types for
> ‘MPI_File_write_at_all_end’
> >> int MPI_File_write_at_all_end( MPI_File fh,void * buf,MPI_Status *
> status )
> >> ^
> >> In file included from /mirror/mpich2/include/mpi.h:2121:0,
> >> from log_mpi_core.c:10:
> >> /mirror/mpich2/include/mpio.h:203:5: note: previous declaration of
> ‘MPI_File_write_at_all_end’ was here
> >> int MPI_File_write_at_all_end(MPI_File fh, const void *buf, MPI_Status
> *status);
> >> ^
> >> In file included from log_mpi_core.c:6997:0:
> >> log_mpi_io.c:1689:5: error: conflicting types for
> ‘MPI_File_write_all_begin’
> >> int MPI_File_write_all_begin( MPI_File fh,void * buf,int
> count,MPI_Datatype datatype )
> >> ^
> >> In file included from /mirror/mpich2/include/mpi.h:2121:0,
> >> from log_mpi_core.c:10:
> >> /mirror/mpich2/include/mpio.h:207:5: note: previous declaration of
> ‘MPI_File_write_all_begin’ was here
> >> int MPI_File_write_all_begin(MPI_File fh, const void *buf, int count,
> MPI_Datatype datatype)
> >> ^
> >> In file included from log_mpi_core.c:6997:0:
> >> log_mpi_io.c:1722:5: error: conflicting types for
> ‘MPI_File_write_all_end’
> >> int MPI_File_write_all_end( MPI_File fh,void * buf,MPI_Status *
> status )
> >> ^
> >> In file included from /mirror/mpich2/include/mpi.h:2121:0,
> >> from log_mpi_core.c:10:
> >> /mirror/mpich2/include/mpio.h:209:5: note: previous declaration of
> ‘MPI_File_write_all_end’ was here
> >> int MPI_File_write_all_end(MPI_File fh, const void *buf, MPI_Status
> *status);
> >> ^
> >> In file included from log_mpi_core.c:6997:0:
> >> log_mpi_io.c:1821:5: error: conflicting types for
> ‘MPI_File_write_ordered_begin’
> >> int MPI_File_write_ordered_begin( MPI_File fh,void * buf,int
> count,MPI_Datatype datatype )
> >> ^
> >> In file included from /mirror/mpich2/include/mpi.h:2121:0,
> >> from log_mpi_core.c:10:
> >> /mirror/mpich2/include/mpio.h:213:5: note: previous declaration of
> ‘MPI_File_write_ordered_begin’ was here
> >> int MPI_File_write_ordered_begin(MPI_File fh, const void *buf, int
> count, MPI_Datatype datatype)
> >> ^
> >> In file included from log_mpi_core.c:6997:0:
> >> log_mpi_io.c:1854:5: error: conflicting types for
> ‘MPI_File_write_ordered_end’
> >> int MPI_File_write_ordered_end( MPI_File fh,void * buf,MPI_Status *
> status )
> >> ^
> >> In file included from /mirror/mpich2/include/mpi.h:2121:0,
> >> from log_mpi_core.c:10:
> >> /mirror/mpich2/include/mpio.h:215:5: note: previous declaration of
> ‘MPI_File_write_ordered_end’ was here
> >> int MPI_File_write_ordered_end(MPI_File fh, const void *buf, MPI_Status
> *status);
> >> ^
> >> make[4]: *** [log_mpi_core.o] Error 1
> >> make[3]: *** [build_lib_bin] Error 2
> >> make[2]: *** [all] Error 2
> >>
> >> **** Making src/graphics ....
> >> make --no-print-directory build_lib_bin
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o mpe_graphics.no -c mpe_graphics.c
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o xcolor.no -c xcolor.c
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o xframe.no -c xframe.c
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o xinit.no -c xinit.c
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o xwmap.no -c xwmap.c
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o xmouse.no -c xmouse.c
> >> cc -I.. -I../include -I/mirror/mpe2-1.3.0/include -I../../..
> -I../../../include -DMPE_NOMPI -o xkey.no -c xkey.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o
> mpe_graphics.po -c mpe_graphics.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o xcolor.po -c
> xcolor.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o xframe.po -c
> xframe.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o xinit.po -c
> xinit.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o xwmap.po -c
> xwmap.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o xmouse.po -c
> xmouse.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o xkey.po -c
> xkey.c
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -o
> visual_mess.po -c visual_mess.c
> >> visual_mess.c: In function ‘MPI_Bsend’:
> >> visual_mess.c:325:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:847:5: error: prototype declaration
> >> int MPI_Bsend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Bsend_init’:
> >> visual_mess.c:349:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:884:5: error: prototype declaration
> >> int MPI_Bsend_init(const void *buf, int count, MPI_Datatype datatype,
> int dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Send_init’:
> >> visual_mess.c:445:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:882:5: error: prototype declaration
> >> int MPI_Send_init(const void *buf, int count, MPI_Datatype datatype,
> int dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Ibsend’:
> >> visual_mess.c:481:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:857:5: error: prototype declaration
> >> int MPI_Ibsend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Irsend’:
> >> visual_mess.c:546:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:861:5: error: prototype declaration
> >> int MPI_Irsend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Isend’:
> >> visual_mess.c:582:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:855:5: error: prototype declaration
> >> int MPI_Isend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Issend’:
> >> visual_mess.c:618:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:859:5: error: prototype declaration
> >> int MPI_Issend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Rsend’:
> >> visual_mess.c:679:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:851:5: error: prototype declaration
> >> int MPI_Rsend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Rsend_init’:
> >> visual_mess.c:703:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:888:5: error: prototype declaration
> >> int MPI_Rsend_init(const void *buf, int count, MPI_Datatype datatype,
> int dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Send’:
> >> visual_mess.c:739:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:842:5: error: prototype declaration
> >> int MPI_Send(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Sendrecv’:
> >> visual_mess.c:763:8: error: argument ‘sendbuf’ doesn’t match prototype
> >> void * sendbuf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:894:5: error: prototype declaration
> >> int MPI_Sendrecv(const void *sendbuf, int sendcount, MPI_Datatype
> sendtype, int dest,
> >> ^
> >> visual_mess.c: In function ‘MPI_Ssend’:
> >> visual_mess.c:828:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:849:5: error: prototype declaration
> >> int MPI_Ssend(const void *buf, int count, MPI_Datatype datatype, int
> dest, int tag,
> >> ^
> >> visual_mess.c: In function ‘MPI_Ssend_init’:
> >> visual_mess.c:852:8: error: argument ‘buf’ doesn’t match prototype
> >> void * buf;
> >> ^
> >> In file included from visual_mess.c:27:0:
> >> /mirror/mpich2/include/mpi.h:886:5: error: prototype declaration
> >> int MPI_Ssend_init(const void *buf, int count, MPI_Datatype datatype,
> int dest, int tag,
> >> ^
> >> make[4]: *** [visual_mess.po] Error 1
> >> make[3]: *** [build_lib_bin] Error 2
> >> make[2]: *** [all] Error 2
> >>
> >> **** Making src/collchk ....
> >> make --no-print-directory build_lib_bin
> >> make --no-print-directory /mirror/mpe2-1.3.0/lib/libmpe_collchk.a
> >> /mirror/mpich2/bin/mpicc -I.. -I../include -I/mirror/mpe2-1.3.0/include
> -I../../.. -I../../../include -I/mirror/mpich2/include/ -c begin.c
> >> In file included from begin.c:5:0:
> >> ../include/collchk.h:25:5: error: conflicting types for
> ‘MPI_Add_error_string’
> >> int MPI_Add_error_string(int errorcode, char *string);
> >> ^
> >> In file included from ../include/collchk.h:20:0,
> >> from begin.c:5:
> >> /mirror/mpich2/include/mpi.h:1157:5: note: previous declaration of
> ‘MPI_Add_error_string’ was here
> >> int MPI_Add_error_string(int errorcode, const char *string);
> >> ^
> >> make[5]: *** [begin.o] Error 1
> >> make[4]: *** [default] Error 2
> >> make[3]: *** [build_lib_bin] Error 2
> >> make[2]: *** [all] Error 2
> >>
> >> ......
> >>
> >> make /mirror/mpe2-1.3.0/src/slog2sdk/trace_rlog/bin/rlog_print
> >> cc -I.. -I/usr/lib/jvm/java-7-openjdk-amd64/include
> -I/usr/lib/jvm/java-7-openjdk-amd64/include/linux
> -I../../src/logformat/trace -g -O2 -c trace_input.c
> >> cc -I.. -I/usr/lib/jvm/java-7-openjdk-amd64/include
> -I/usr/lib/jvm/java-7-openjdk-amd64/include/linux
> -I../../src/logformat/trace -g -O2 -c rlogutil.c
> >> rlogutil.c: In function ‘RLOG_CreateInputStruct’:
> >> rlogutil.c:107:7: warning: ignoring return value of ‘fread’, declared
> with attribute warn_unused_result [-Wunused-result]
> >> fread(&length, sizeof(int), 1, pInput->f);
> >> ^
> >> rlogutil.c:159:11: warning: ignoring return value of ‘fread’, declared
> with attribute warn_unused_result [-Wunused-result]
> >> fread(&cur_rank, sizeof(int), 1, pInput->f);
> >> ^
> >> rlogutil.c:167:11: warning: ignoring return value of ‘fread’, declared
> with attribute warn_unused_result [-Wunused-result]
> >> fread(&pInput->pNumEventRecursions[rank_index], sizeof(int), 1,
> pInput->f);
> >>
> >> _______________________________________________
> >> discuss mailing list discuss at mpich.org
> >> To manage subscription options or unsubscribe:
> >> https://lists.mpich.org/mailman/listinfo/discuss
> >
> > _______________________________________________
> > discuss mailing list discuss at mpich.org
> > To manage subscription options or unsubscribe:
> > https://lists.mpich.org/mailman/listinfo/discuss
>
> --
> Pavan Balaji ✉️
> http://www.mcs.anl.gov/~balaji
>
> _______________________________________________
> discuss mailing list discuss at mpich.org
> To manage subscription options or unsubscribe:
> https://lists.mpich.org/mailman/listinfo/discuss
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mpich.org/pipermail/discuss/attachments/20141217/045518fe/attachment.html>
-------------- next part --------------
_______________________________________________
discuss mailing list discuss at mpich.org
To manage subscription options or unsubscribe:
https://lists.mpich.org/mailman/listinfo/discuss
More information about the discuss
mailing list