[mpich-discuss] Fwd: Error Building MPICH

[Aaron Evans]

I followed the install manual for MPICH (
http://www.mpich.org/static/downloads/3.1.3/mpich-3.1.3-installguide.pdf)
and could not get it to build. It seemed to configure, but it did not build.

I am attaching the c.txt and m.txt as instructed in manual.

Thank  you,
Aaron Evans
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Configuring MPICH version 3.1.3 with  '-prefix=/users/login/ahe72/web/HarborBranch/mpif90/install/'
Running on system: Linux ha2.dnslinks.net 2.6.32-100.0.19.el5 #1 SMP Fri Sep 17 17:51:41 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux
checking for icc... no
checking for pgcc... no
checking for xlc... no
checking for xlC... no
checking for pathcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 98304
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for icpc... no
checking for pgCC... no
checking for xlC... no
checking for pathCC... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... gcc3
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
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checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking hcoll/api/hcoll_api.h usability... no
checking hcoll/api/hcoll_api.h presence... no
checking for hcoll/api/hcoll_api.h... no
checking for hcoll_init in -lhcoll... no
configure: RUNNING PREREQ FOR ch3:nemesis
checking for getpagesize... yes
checking for getpagesize... (cached) yes
configure: ===== configuring src/mpl =====
configure: running /bin/sh ../../../../mpif90/mpich-3.1.3/src/mpl/configure --disable-option-checking '--prefix=/users/login/ahe72/web/HarborBranch/mpif90/install'  --cache-file=/dev/null --srcdir=../../../../mpif90/mpich-3.1.3/src/mpl
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 98304
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking for gcov... gcov
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
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checking whether __attribute__ allowed... yes
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checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing include/mplconfig.h commands
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines
configure: ===== done with src/mpl configure =====
configure: sourcing src/mpl/localdefs
configure: ===== configuring src/openpa =====
configure: running /bin/sh ../../../../mpif90/mpich-3.1.3/src/openpa/configure --disable-option-checking '--prefix=/users/login/ahe72/web/HarborBranch/mpif90/install' --with-atomic-primitives=auto_allow_emulation --cache-file=/dev/null --srcdir=../../../../mpif90/mpich-3.1.3/src/openpa
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 98304
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking dependency style of gcc... (cached) gcc3
checking whether to enable assertions... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking atomic.h usability... no
checking atomic.h presence... no
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checking intrin.h usability... no
checking intrin.h presence... no
checking for intrin.h... no
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for an ANSI C-conforming const... yes
checking for pthread_create in -lpthread... yes
checking for pthread_yield... yes
checking if 100 threads can be run at once... yes
checking size of void *... 8
checking size of int... 4
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking if compiler rejects bogus asm statements... yes
checking for support for gcc x86/x86_64 primitives... yes
checking for support for gcc x86 primitives for pre-Pentium 4... yes
checking for support for gcc ia64 primitives... no
checking for support for gcc PowerPC atomics... no
checking for support for gcc ARM atomics... no
checking for support for gcc SiCortex atomics... no
checking for support for gcc atomic intrinsics... yes
checking for support for Windows NT atomic intrinsics... no
checking for support for Sun atomic operations library... no
checking whether to enable strict fairness checks... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating openpa.pc
config.status: creating src/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing src/opa_config.h commands
config.status: creating src/opa_config.h - prefix OPA for src/config.h defines
configure: ===== done with src/openpa configure =====
sourcing /users/login/ahe72/web/HarborBranch/mpif90/mpich-3.1.3/src/pm/hydra/mpichprereq
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
checking whether C compiler accepts option -O2... yes
checking whether C compiler option -O2 works with an invalid prototype program... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for type of weak symbol alias support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking for multiple weak symbol support... yes
checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf)
checking whether Fortran 77 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lgfortranbegin -lgfortran -lm
checking whether gfortran accepts the FLIBS found by autoconf... yes
checking whether gcc links with FLIBS found by autoconf... yes
checking whether Fortran 77 and C objects are compatible... yes
checking for linker for Fortran main program... Use Fortran to link programs
checking for Fortran 77 name mangling... lower uscore
checking for libraries to link Fortran main with C stdio routines... none
checking whether Fortran init will work with C... yes
checking for extension for Fortran 90 programs... f90
checking whether the Fortran 90 compiler (gfortran    ) works... yes
checking whether the Fortran 90 compiler (gfortran    ) is a cross-compiler... no
checking whether Fortran 90 compiler works with Fortran 77 compiler... yes
checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf)
checking whether Fortran 77 accepts ! for comments... yes
checking for include directory flag for Fortran... -I
checking for Fortran 77 flag for library directories... -L
checking whether Fortran 77 compiler processes .F files with C preprocessor... yes
checking whether gfortran allows mismatched arguments... yes
checking for Fortran 2008 support... no
checking for shared library (esp. rpath) characteristics of FC... done (results in src/env/fc_shlib.conf)
checking whether the Fortran 90 compiler (gfortran    ) works... yes
checking whether the Fortran 90 compiler (gfortran    ) is a cross-compiler... no
checking for Fortran 90 module extension... mod
checking for Fortran 90 module include flag... -I
checking for Fortran 90 module output directory flag... -J
checking whether Fortran 90 compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes
checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none
checking whether the C++ compiler g++ can build an executable... yes
checking whether C++ compiler works with string... yes
checking whether the compiler supports exceptions... yes
checking whether the compiler recognizes bool as a built-in type... yes
checking whether the compiler implements namespaces... yes
checking whether <iostream> available... yes
checking whether the compiler implements the namespace std... yes
checking whether <math> available... no
checking for GNU g++ version... 4 . 1
checking for shared library (esp. rpath) characteristics of CXX... done (results in src/env/cxx_shlib.conf)
checking whether C++ compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for perl... /usr/local/bin/perl
checking for ar... ar
checking for ranlib... ranlib
checking for killall... killall
checking whether install works... yes
checking whether mkdir -p works... yes
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for bash... /bin/bash
checking whether /bin/bash supports arrays... yes
checking for doctext... false
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
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checking whether __attribute__((format)) allowed... yes
checking if C compiler supports __builtin_expect... yes
checking whether byte ordering is bigendian... no
checking whether C compiler allows unaligned doubles... yes
checking whether gcc supports __func__... yes
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for max C struct integer alignment... eight
checking for max C struct floating point alignment... sixteen
checking for max C struct alignment of structs with doubles... eight
checking for max C struct floating point alignment with long doubles... sixteen
configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs.  MPICH does not handle this case automatically and you should avoid assumed extents for structures containing float types.
checking if alignment of structs with doubles is based on position... no
checking if alignment of structs with long long ints is based on position... no
checking if double alignment breaks rules, find actual alignment... no
checking for alignment restrictions on pointers... int or better
checking size of char... 1
checking size of unsigned char... 1
checking size of short... 2
checking size of unsigned short... 2
checking size of int... 4
checking size of unsigned int... 4
checking size of long... 8
checking size of unsigned long... 8
checking size of long long... 8
checking size of unsigned long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 16
checking size of void *... 8
checking for ANSI C header files... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking size of wchar_t... 4
checking size of float_int... 8
checking size of double_int... 16
checking size of long_int... 16
checking size of short_int... 8
checking size of two_int... 8
checking size of long_double_int... 32
checking sys/bitypes.h usability... yes
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checking for stdint.h... (cached) yes
checking for int8_t... yes
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checking stdbool.h usability... yes
checking stdbool.h presence... yes
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checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking size of _Bool... 1
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 32
checking for _Bool... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for size of Fortran type integer... 4
checking for size of Fortran type real... 4
checking for size of Fortran type double precision... 8
checking whether integer*1 is supported... yes
checking whether integer*2 is supported... yes
checking whether integer*4 is supported... yes
checking whether integer*8 is supported... yes
checking whether integer*16 is supported... yes
checking whether real*4 is supported... yes
checking whether real*8 is supported... yes
checking whether real*16 is supported... no
checking for C type matching Fortran real... float
checking for C type matching Fortran double... double
checking for C type matching Fortran integer... int
checking for values of Fortran logicals... True is 1 and False is 0
checking for Fortran 90 integer kind for 8-byte integers... 8
checking for Fortran 90 integer kind for 4-byte integers... 4
checking if real*8 is supported in Fortran 90... yes
checking size of bool... 1
checking complex usability... yes
checking complex presence... yes
checking for complex... yes
checking size of Complex... 8
checking size of DoubleComplex... 16
checking size of LongDoubleComplex... 32
checking for alignment restrictions on int64_t... no
checking for alignment restrictions on int32_t... no
checking for gcc __asm__ and pentium cmpxchgl instruction... no
checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... yes
checking for gcc __asm__ and IA64 xchg4 instruction... no
checking for gcov... gcov
checking for ANSI C header files... (cached) yes
checking for stdlib.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
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checking for string.h... (cached) yes
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checking limits.h usability... yes
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checking errno.h usability... yes
checking errno.h presence... yes
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checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
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checking sys/time.h presence... yes
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checking assert.h presence... yes
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checking whether vsnprintf needs a declaration... no
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checking whether strerror_r returns char *... no
checking whether strerror_r needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for qsort... yes
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checking for alloca... yes
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checking whether strdup needs a declaration... no
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checking whether fdopen needs a declaration... yes
checking for putenv... yes
checking whether putenv needs a declaration... no
checking for clock_gettime... no
checking for clock_getres... no
checking for gethrtime... no
checking for mach_absolute_time... no
checking for gettimeofday... yes
checking size of MPIR_Bsend_data_t... 96
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_key_create in -lpthread... yes
checking for pthread_yield... yes
checking for pthread_key_create... yes
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checking whether pthread_cleanup_push is available (may be a macro in pthread.h)... no
checking whether pthread.h defines PTHREAD_MUTEX_RECURSIVE_NP... yes
checking whether pthread.h defines PTHREAD_MUTEX_RECURSIVE... no
checking whether pthread.h defines PTHREAD_MUTEX_ERRORCHECK_NP... yes
checking whether pthread.h defines PTHREAD_MUTEX_ERRORCHECK... no
checking whether pthread_mutexattr_settype needs a declaration... yes
checking for thread local storage specifier... __thread
checking for getpid... yes
checking sched.h usability... yes
checking sched.h presence... yes
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checking for yield... no
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checking whether usleep needs a declaration... no
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checking for sched_getaffinity... yes
checking for bindprocessor... no
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checking whether cpu_set_t available... yes
checking whether the CPU_SET and CPU_ZERO macros are defined... no
configure: RUNNING CONFIGURE FOR F90 CODE
checking whether ln -s works... yes
checking for extension for Fortran 90 programs... f90
checking for the precision and range of reals...  6 , 37
checking for the precision and range of double precision...  15 , 307
checking for the range of integer...  9
checking for available integer kinds...  2 , 1, 4 , 2, 9 , 4, 18 , 8,
checking for available integer ranges...  {  2 , 1 , 1 }, {  4 , 2 , 2 }, {  9 , 4 , 4 }, {  18 , 8 , 8 },
checking for unistd.h... (cached) yes
checking for string.h... (cached) yes
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checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for socket... yes
checking for setsockopt... yes
checking for gethostbyname... yes
checking whether socklen_t is defined (in sys/socket.h if present)... yes
checking whether struct hostent contains h_addr_list... yes
checking whether __attribute__ allowed... (cached) yes
checking whether __attribute__((format)) allowed... (cached) yes
configure: RUNNING CONFIGURE FOR CH3 DEVICE
checking for assert.h... (cached) yes
checking for limits.h... (cached) yes
checking for string.h... (cached) yes
checking for sys/types.h... (cached) yes
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checking uuid/uuid.h presence... yes
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checking time.h usability... yes
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checking ctype.h usability... yes
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checking for sys/socket.h... (cached) yes
checking for net/if.h... yes
checking for pid_t... yes
checking for inet_pton... yes
checking for gethostname... yes
checking whether gethostname needs a declaration... no
checking for CFUUIDCreate... no
checking for uuid_generate... no
checking for time... yes
checking for OpenPA atomic primitive availability... yes
checking whether byte ordering is bigendian... (cached) no
configure: RUNNING CONFIGURE FOR ch3:nemesis
checking for net/if.h... yes
checking for assert.h... (cached) yes
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checking for sched.h... (cached) yes
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
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checking sys/ioctl.h presence... yes
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checking sys/sockio.h usability... no
checking sys/sockio.h presence... no
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checking for sys/types.h... (cached) yes
checking for errno.h... (cached) yes
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checking sys/ipc.h presence... yes
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checking sys/shm.h usability... yes
checking sys/shm.h presence... yes
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checking signal.h usability... yes
checking signal.h presence... yes
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checking for signal... yes
checking for mkstemp... (cached) yes
checking for rand... yes
checking for srand... yes
checking for mmap... yes
checking for munmap... yes
configure: Using a memory-mapped file for shared memory
checking whether struct hostent contains h_addr_list... (cached) yes
checking whether we can use struct ifconf... yes
checking whether we can use struct ifreq... yes
checking knem_io.h usability... no
checking knem_io.h presence... no
checking for knem_io.h... no
configure: ===== configuring src/mpi/romio =====
configure: running /bin/sh ../../../../../mpif90/mpich-3.1.3/src/mpi/romio/configure --disable-option-checking '--prefix=/users/login/ahe72/web/HarborBranch/mpif90/install'  --cache-file=/dev/null --srcdir=../../../../../mpif90/mpich-3.1.3/src/mpi/romio
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for style of include used by make... GNU
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 98304
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld -m elf_x86_64 option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
Configuring with args dummy mt
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for architecture... LINUX
ROMIO home directory is ../../../../../mpif90/mpich-3.1.3/src/mpi/romio
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for long long... yes
checking size of long long... 8
checking for memalign... yes
checking Fortran external names
Fortran externals have a trailing underscore and are lowercase
checking for inline... inline
checking for size_t... yes
checking for ssize_t... yes
checking for off_t... yes
checking how to run the C preprocessor... gcc -E
checking for unistd.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
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checking malloc.h usability... yes
checking malloc.h presence... yes
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checking stddef.h usability... yes
checking stddef.h presence... yes
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checking limits.h usability... yes
checking limits.h presence... yes
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checking time.h usability... yes
checking time.h presence... yes
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checking for mpix.h... no
checking for u_char... yes
checking for u_short... yes
checking for u_int... yes
checking for u_long... yes
checking sys/attr.h usability... no
checking sys/attr.h presence... no
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checking size of int... 4
checking size of void *... 8
checking for int large enough for pointers... no
checking size of long long... (cached) 8
checking for extension for Fortran 90 programs... f90
checking for Fortran 90 KIND parameter for 8-byte integers...            8
checking that we can use integer*8 to declare MPI_DISPLACMENT_CURRENT... yes
Overriding Array test for MPICH
checking for type of weak symbol alias support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking for multiple weak symbol support... yes
checking whether struct flock compatible with MPI_Offset... yes
checking for pvfs2-config... notfound
checking configured file systems... testfs ufs nfs
configure: WARNING: File locks may not work with NFS.  See the Installation and
users manual for instructions on testing and if necessary fixing this
checking gpfs.h usability... no
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checking for library containing aio_write... -lrt
checking signal.h usability... yes
checking signal.h presence... yes
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checking if sys/aio.h exists and can be compiled... no
checking whether aio routines can be used... yes
checking for obsolete two-argument aio_write... no
checking for obsolete two-argument aio_suspend... no
checking for aio_fildes member of aiocb structure... yes
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checking for aio_handle member of aiocb structure... no
checking for aio_reqprio member of aiocb structure... yes
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checking sys/vfs.h usability... yes
checking sys/vfs.h presence... yes
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checking sys/param.h usability... yes
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checking sys/mount.h usability... yes
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checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking for statfs... yes
checking whether struct statfs properly defined... yes
checking for f_fstypename member of statfs structure... no
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checking for sys/types.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stat... yes
checking for st_fstype member of stat structure... no
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checking for sys/vfs.h... (cached) yes
checking for statvfs... yes
checking for f_basetype member of statvfs structure... no
checking for blksize_t... no
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checking for large file defines... yes
checking whether off64_t is an scalar type... yes
checking for strerror... yes
checking for doctext... false
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for lstat... yes
checking whether lstat needs a declaration... yes
checking for readlink... yes
checking whether readlink needs a declaration... no
checking for fsync... yes
checking whether fsync needs a declaration... no
checking for ftruncate... yes
checking whether ftruncate needs a declaration... no
checking for lseek64... yes
checking whether lseek64 needs a declaration... no
checking for usleep... yes
checking whether usleep needs a declaration... no
checking for unistd.h... (cached) yes
checking for large file defines... yes
setting SYSDEP_INC to 
checking for C/C++ restrict keyword... __restrict
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking for gcov... gcov
setting CC to gcc
setting F77 to gfortran
setting TEST_CC to $(bindir)/mpicc
setting TEST_F77 to $(bindir)/mpifort
setting CFLAGS to    -O2  -DFORTRANUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64
setting USER_CFLAGS to 
setting USER_FFLAGS to 
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating mpi2-other/info/Makefile
config.status: creating mpi2-other/array/Makefile
config.status: creating test/Makefile
config.status: creating test/misc.c
config.status: creating test/large_file.c
config.status: creating test/runtests
config.status: creating test-internal/Makefile
config.status: creating util/romioinstall
config.status: creating include/mpio.h
config.status: creating include/mpiof.h
config.status: creating mpi2-other/info/fortran/Makefile
config.status: creating mpi2-other/array/fortran/Makefile
config.status: creating test/fmisc.f
config.status: creating test/fcoll_test.f
config.status: creating test/pfcoll_test.f
config.status: creating test/fperf.f
config.status: creating adio/include/romioconf.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing default-1 commands
configure: ===== done with src/mpi/romio configure =====
configure: sourcing src/mpi/romio/localdefs
configure: ===== configuring src/pm/hydra =====
configure: running /bin/sh ../../../../../mpif90/mpich-3.1.3/src/pm/hydra/configure --disable-option-checking '--prefix=/users/login/ahe72/web/HarborBranch/mpif90/install'  --cache-file=/dev/null --srcdir=../../../../../mpif90/mpich-3.1.3/src/pm/hydra
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking target system type... x86_64-unknown-linux-gnu
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for fgrep... /bin/grep -F
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking the archiver (ar) interface... ar
checking whether make supports nested variables... (cached) yes
checking for doctext... false
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking size of unsigned long... 8
checking for size_t... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for ld used by gcc... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 98304
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld -m elf_x86_64 option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for variable argument list macro functionality... yes
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
checking for doxygen... /usr/bin/doxygen
checking for gcov... gcov
checking for ANSI C header files... (cached) yes
checking for unistd.h... (cached) yes
checking for strings.h... (cached) yes
checking for sys/types.h... (cached) yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for sys/stat.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking sys/un.h usability... yes
checking sys/un.h presence... yes
checking for sys/un.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking poll.h usability... yes
checking poll.h presence... yes
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checking bootstrap server... user,ssh,rsh,fork,slurm,ll,lsf,sge,pbs,cobalt,manual,persist
checking tm.h usability... no
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checking process manager... pmiserv
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checking for X... libraries , headers 

###
### Configuring hwloc core
###
checking hwloc building mode... embedded
configure: hwloc builddir: /users/login/ahe72/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc
configure: hwloc srcdir: /users/login/ahe72/web/HarborBranch/mpif90/mpich-3.1.3/src/pm/hydra/tools/topo/hwloc/hwloc
configure: Detected VPATH build
checking if want hwloc maintainer support... disabled (embedded mode)
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checking for hwloc symbol prefix... hwloc_
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checking which OS support to include... Linux
checking which CPU support to include... x86_64
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checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
configure: WARNING: "-fvisibility=hidden" has been added to the hwloc CFLAGS
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checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating tools/topo/hwloc/hwloc/Makefile
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config.status: executing depfiles commands
config.status: executing libtool commands
configure: ===== done with src/pm/hydra configure =====
checking size of OPA_ptr_t... 8
checking the sizeof MPI_Offset... 8
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checking the minimum alignment of Fortran common block of 1 integers... 16
checking the minimum alignment of Fortran common block of 5 integers... 16, too small! reset to 32
configure: WARNING: The ch3 device did not set the maximum size of an error string, 512 being used.
configure: creating ./config.lt
config.lt: creating libtool
checking that generated files are newer than configure... done
configure: creating ./config.status
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config.status: creating src/packaging/pkgconfig/mpich.pc
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config.status: WARNING:  '../../mpif90/mpich-3.1.3/src/packaging/envmods/mpich.module.in' seems to ignore the --datarootdir setting
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=== configuring in test/mpi (/users/login/ahe72/web/HarborBranch/BuildDirectory/mpich/test/mpi)
configure: running /bin/sh ../../../../mpif90/mpich-3.1.3/test/mpi/configure --disable-option-checking '--prefix=/users/login/ahe72/web/HarborBranch/mpif90/install'  --cache-file=/dev/null --srcdir=../../../../mpif90/mpich-3.1.3/test/mpi
RUNNING CONFIGURE FOR MPI TESTS
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checking that generated files are newer than configure... done
configure: creating ./config.status
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config.status: creating impls/mpich/Makefile
config.status: creating impls/mpich/testlist
config.status: creating impls/mpich/mpi_t/Makefile
config.status: creating include/mpitestconf.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
config.status: executing default-4 commands
Configuration completed.
-------------- next part --------------
make  all-recursive
make[1]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich'
Making all in /users/login/ahe72/web/HarborBranch/BuildDirectory/mpich/src/mpl
make[2]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpl'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpl'
Making all in /users/login/ahe72/web/HarborBranch/BuildDirectory/mpich/src/openpa
make[2]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa'
Making all in src
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa/src'
make  all-am
make[4]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa/src'
make[4]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa/src'
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa/src'
Making all in test
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa/test'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa/test'
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa'
make[2]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/openpa'
Making all in src/mpi/romio
make[2]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpi/romio'
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpi/romio'
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpi/romio'
make[2]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpi/romio'
Making all in src/pm/hydra
make[2]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra'
Making all in ../../mpl
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpl'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/mpl'
Making all in tools/topo/hwloc/hwloc
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc'
Making all in src
make[4]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc/src'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc/src'
Making all in include
make[4]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc/include'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc/include'
make[4]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc'
make[4]: Nothing to be done for `all-am'.
make[4]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc'
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra/tools/topo/hwloc/hwloc'
Making all in .
make[3]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra'
make[3]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra'
make[2]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich/src/pm/hydra'
Making all in .
make[2]: Entering directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich'
  CCLD     src/env/mpivars
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x1e1): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1f9): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x211): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x286): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x29e): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x2b6): more undefined references to `MPL_env2bool' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x54e): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x564): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x57a): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x630): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x648): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x660): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x6d9): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x6f1): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x709): more undefined references to `MPL_env2bool' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x8d0): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x8e8): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x900): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x979): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x991): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x9a9): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0xa1e): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xa36): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xa4e): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xac7): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xadf): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0xaf7): more undefined references to `MPL_env2bool' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0xb70): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0xb88): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0xba0): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0xc19): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0xc31): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0xc49): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0xec3): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xedb): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xef3): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0xf68): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0xf80): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0xf98): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1014): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x102c): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x1044): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x10bd): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x10d5): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x10ed): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1166): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x117e): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x1196): more undefined references to `MPL_env2bool' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x120b): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1223): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x123b): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x12b4): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x12cc): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x12e4): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1360): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1378): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1390): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x140c): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1424): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x143c): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x1a12): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1a2a): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1a42): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1ab7): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1acf): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1ae7): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1b60): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1b78): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1b90): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x1c0b): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1c23): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x1c3b): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x24ce): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x24e4): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x24fa): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x2510): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x2526): undefined reference to `MPL_env2str'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x253c): more undefined references to `MPL_env2str' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x25f3): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x260b): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x2623): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x2699): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x26b1): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x26c9): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x273f): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x2757): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x276f): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x308d): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x30a3): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x30b9): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x30cf): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x30e5): undefined reference to `MPL_env2str'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x30fb): more undefined references to `MPL_env2str' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x31b7): undefined reference to `MPL_env2range'
mpich_cvars.c:(.text+0x31d4): undefined reference to `MPL_env2range'
mpich_cvars.c:(.text+0x31f1): undefined reference to `MPL_env2range'
mpich_cvars.c:(.text+0x320e): undefined reference to `MPL_env2range'
mpich_cvars.c:(.text+0x322b): undefined reference to `MPL_env2range'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x3248): more undefined references to `MPL_env2range' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x359a): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x35b0): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x35c6): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x35dc): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x35f2): undefined reference to `MPL_env2str'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x3608): more undefined references to `MPL_env2str' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x36bf): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x36d7): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x36ef): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3765): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x377d): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x3795): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x380b): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x3823): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x383b): more undefined references to `MPL_env2bool' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x3b66): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x3b7c): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x3b92): undefined reference to `MPL_env2str'
mpich_cvars.c:(.text+0x3c51): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3c69): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3c81): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3d08): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3d20): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x3d38): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x3e5d): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x3e75): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x3e8d): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x3f09): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3f21): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3f39): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3fae): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x3fc6): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x3fde): more undefined references to `MPL_env2int' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x41a6): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x41be): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x41d6): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x424f): undefined reference to `MPL_env2bool'
mpich_cvars.c:(.text+0x4267): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o):mpich_cvars.c:(.text+0x427f): more undefined references to `MPL_env2bool' follow
lib/.libs/libmpi.a(lib_libmpi_la-mpich_cvars.o): In function `MPIR_T_cvar_init':
mpich_cvars.c:(.text+0x457a): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x4592): undefined reference to `MPL_env2int'
mpich_cvars.c:(.text+0x45a6): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-mpid_init.o): In function `MPID_Init':
mpid_init.c:(.text+0x1ac): undefined reference to `MPL_env2bool'
lib/.libs/libmpi.a(lib_libmpi_la-mpid_vc.o): In function `MPIDI_Populate_vc_node_ids':
mpid_vc.c:(.text+0x24e): undefined reference to `MPL_env2int'
mpid_vc.c:(.text+0x260): undefined reference to `MPL_env2int'
lib/.libs/libmpi.a(lib_libmpi_la-tcp_send.o): In function `MPID_nem_tcp_send_queued':
tcp_send.c:(.text+0x57): undefined reference to `MPL_large_writev'
lib/.libs/libmpi.a(lib_libmpi_la-tcp_send.o): In function `MPID_nem_tcp_SendNoncontig':
tcp_send.c:(.text+0x945): undefined reference to `MPL_large_writev'
lib/.libs/libmpi.a(lib_libmpi_la-tcp_send.o): In function `MPID_nem_tcp_iStartContigMsg_paused':
tcp_send.c:(.text+0xe8e): undefined reference to `MPL_large_writev'
lib/.libs/libmpi.a(lib_libmpi_la-tcp_send.o): In function `MPID_nem_tcp_iStartContigMsg':
tcp_send.c:(.text+0x148a): undefined reference to `MPL_large_writev'
lib/.libs/libmpi.a(lib_libmpi_la-tcp_send.o): In function `MPID_nem_tcp_iSendContig':
tcp_send.c:(.text+0x1c47): undefined reference to `MPL_large_writev'
lib/.libs/libmpi.a(lib_libmpi_la-socksm.o): In function `state_commrdy_handler':
socksm.c:(.text+0x1767): undefined reference to `MPL_large_readv'
lib/.libs/libmpi.a(lib_libmpi_la-socksm.o): In function `state_l_cntd_handler':
socksm.c:(.text+0x28b9): undefined reference to `MPL_large_readv'
socksm.c:(.text+0x298b): undefined reference to `MPL_large_readv'
lib/.libs/libmpi.a(lib_libmpi_la-socksm.o): In function `state_tc_c_cntd_handler':
socksm.c:(.text+0x2d47): undefined reference to `MPL_large_writev'
socksm.c:(.text+0x2e92): undefined reference to `MPL_large_writev'
lib/.libs/libmpi.a(lib_libmpi_la-mpit.o): In function `MPIR_T_strncpy':
mpit.c:(.text+0x68): undefined reference to `MPL_strncpy'
collect2: ld returned 1 exit status
make[2]: *** [src/env/mpivars] Error 1
make[2]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/users12/domains/tegasigns.com/web/HarborBranch/BuildDirectory/mpich'
make: *** [all] Error 2