[mpich-discuss] Error building mpich-3.1.2 on Solaris 10 withgcc-4.9.0
Siegmar Gross
Siegmar.Gross at informatik.hs-fulda.de
Sat Sep 6 17:35:46 CDT 2014
Hi,
> Thanks, Siegmar. Are you seeing some errors with “make t
> testing†or are all tests failing? On some platforms, s
> some tests take longer and hence show up as “timeoutsâ€, but
> they are not really hanging. But the number of such tests
> should be small.
I see some bus errors on Solaris 10 Sparc. I attached the log
files for both Solaris 10 Sparc and x86_64, so that you can
see yourself the results.
Kind regards
Siegmar
> We’ll look into the C++ issues. We are trying to get a m
> machine setup locally to test this configuration out.
>
> Regards,
>
> — Pavan
>
> On Sep 6, 2014, at 2:24 AM, Siegmar Gross
<Siegmar.Gross at informatik.hs-fulda.de> wrote:
>
> > Hi,
> >
> >> Could you configure with --disable-cxx to see if you can continue?
> >
> > I can build MPICH with gcc-4.9.0 without C++ bindings on Solaris 10
> > Sparc and x86_64.
> >
> > tyr small_prog 114 mpichversion
> > MPICH Version: 3.2a1
> > MPICH Release date: Fri Sep 5 00:00:35 CDT 2014
> > MPICH Device: ch3:nemesis
> > MPICH configure: --prefix=/usr/local/mpich-3.2_64_gcc
> > --libdir=/usr/local/mpich-3.2_64_gcc/lib64
> > --includedir=/usr/local/mpich-3.2_64_gcc/include64
> > CC=gcc CXX=g++ F77=gfortran FC=gfortran CFLAGS=-m64 CXXFLAGS=-m64
> > FFLAGS=-m64 FCFLAGS=-m64 LDFLAGS=-m64
> > -L/usr/lib/sparcv9 -Wl,-rpath /usr/lib/sparcv9 --enable-f77 --enable-fc
> > --disable-cxx --enable-romio --enable-debuginfo --enable-smpcoll
> > --enable-threads=runtime --with-thread-package=posix --enable-shared
> > MPICH CC: gcc -m64 -O2
> > MPICH CXX: no -m64
> > MPICH F77: gfortran -m64 -O2
> > MPICH FC: gfortran -m64 -O2
> >
> > tyr small_prog 115 mpicc init_finalize.c
> > tyr small_prog 116 mpiexec -np 1 a.out
> > Hello!
> >
> > tyr small_prog 117 mpicc thread_support.c
> > tyr small_prog 118 mpiexec -np 1 a.out
> > I have requested MPI_THREAD_MULTIPLE in "MPI_Init_thread ()" and
> > it provides MPI_THREAD_MULTIPLE
> > "MPI_Query_thread ()" returned MPI_THREAD_MULTIPLE:
> > Many threads are supported and any thread may call
> > MPI functions at any time.
> > "MPI_Is_thread_main ()" returned: "true".
> > tyr small_prog 119
> >
> >
> > I have attached my config and log files for my Solaris Sparc version
> > (even "make check" works fine). However, I get errors with "make
> > testing" (APPLICATION TIMED OUT). Generally, I only use "make check",
> > so perhaps I have to do it in a different way (e.g., running the test
> > as normal user and not as root). I stopped this test.
> >
> > By the way, you can avoid the warning about X11/Xutil.h, if you include
> > X11/Xlib.h before this header file.
> >
> > tyr mpich-3.2-SunOS.sparc.64_gcc_disable-cxx 135 more
/usr/include/X11/Xutil.h
> > /* $TOG: Xutil.h /main/45 1998/02/06 18:03:35 kaleb $ */
> > ...
> > /* You must include <X11/Xlib.h> before including this file */
> > ...
> >
> >
> > I would be grateful, if you can fix the problem for C++ bindings.
> > C++ bindings are available in my Sun C 5.12 version of MPICH.
> >
> > tyr fd1026 101 mpichversion
> > MPICH Version: 3.2a1
> > MPICH Release date: Fri Sep 5 00:00:35 CDT 2014
> > MPICH Device: ch3:nemesis
> > MPICH configure: --prefix=/usr/local/mpich-3.2_64_cc
> > --libdir=/usr/local/mpich-3.2_64_cc/lib64
> > --includedir=/usr/local/mpich-3.2_64_cc/include64
> > CC=cc CXX=CC F77=f77 FC=f95 CFLAGS=-m64 CXXFLAGS=-m64
> > FFLAGS=-m64 FCFLAGS=-m64 LDFLAGS=-m64
> > -L/usr/lib/sparcv9 -R/usr/lib/sparcv9 --enable-f77 --enable-fc
> > --enable-cxx --enable-romio --enable-debuginfo --enable-smpcoll
> > --enable-threads=runtime --with-thread-package=posix --enable-shared
> > MPICH CC: cc -m64 -O2
> > MPICH CXX: CC -m64 -O2
> > MPICH F77: f77 -m64
> > MPICH FC: f95 -m64 -O2
> > tyr fd1026 102
> >
> >
> > Kind regards and thank you very much for any help in advance
> >
> > Siegmar
> >
> >
> >> --Junchao Zhang
> >>
> >>
> >> On Fri, Sep 5, 2014 at 2:26 PM, Siegmar Gross <
> >> Siegmar.Gross at informatik.hs-fulda.de> wrote:
> >>
> >>> Hi,
> >>>
> >>> thank you very much for all answers to my problems building
> >>> MPICH on Solaris with gcc-4.9.0. Today I tried to build
> >>> mpich-master-v3.2a1. Unfortunately I have had the same problems.
> >>>
> >>>> 1) For the linking errors you should provide the full build log but it
> >>>> could just be an issue with the order of arguments passed to Solaris ld,
> >>> or
> >>>> if you compiled gcc to use GNU ld, the same issue might occur if the
> >>>> configure script assumes Solaris => Solaris ld.
> >>>
> >>> I have attached the files in the archive
> >>> mpich-3.2-SunOS.sparc.64_gcc_only-m64.tar.gz
> >>>
> >>>
> >>>> 2) I keep this sticky note on my wiki:
> >>>>
> >>>> "Compiler or options invalid for pre-UNIX 03 X/Open applications and
> >>>> pre-2001 POSIX applications"
> >>>>
> >>>>
> >>>
/usr/gcc/4.6/lib/gcc/i386-pc-solaris2.11/4.6.3/include-fixed/sys/feature_tests.h
:362:2:
> >>>> error: #error "Compiler or options invalid for pre-UNIX 03 X/Open
> >>> applications
> >>>> and pre-2001 POSIX applications"
> >>>>
> >>>> Conflict of standards between _XOPEN_SOURCE and C99 extensions.
> >>>>
> >>>> #if defined(_STDC_C99) && (defined(__XOPEN_OR_POSIX) && !defined(_XPG6))
> >>>>
> >>>> As GCC standards do not match ANSI/ISO/POSIX standards strictly you need
> >>> to
> >>>> specify the standard you want to comply with.
> >>>> Usually adding -D_XOPEN_SOURCE=500 (or 600) and/or -D__EXTENSIONS__ to
> >>> your
> >>>> compiler flags is a good start.
> >>>
> >>> It was a little bit more complicated to get this one as far as
> >>> the build with just "CFLAGS=-m64". Adding "-D__EXTENSIONS__" broke
> >>> the build process. Adding "-D_XOPEN_SOURCE=500" didn't solve the
> >>> problem, because Solaris expects "-D_XOPEN_SOURCE=600". Using this
> >>> flag wasn't helpful, because you redefined it to "500" in file
> >>> mpich-master-v3.2a1/src/mpi/romio/adio/common/ad_read.c, so that I
> >>> had to add "-D_STDC_C99" to keep "600". Another problem came from
> >>> file /usr/include/sys/statvfs.h ("FSTYPSZ" wasn't defined). Looking
> >>> into the file showed the following.
> >>>
> >>> ...
> >>> #define _FSTYPSZ 16
> >>> #if !defined(_XPG4_2) || defined(__EXTENSIONS__)
> >>> #ifndef FSTYPSZ
> >>> #define FSTYPSZ _FSTYPSZ
> >>> #endif
> >>> ...
> >>>
> >>> Finally I could build MPICH with "CFLAGS=-m64 -std=c99 -D_STDC_C99
> >>> -D_POSIX_C_SOURCE=200112L -D_XOPEN_SOURCE=600 -DFSTYPSZ=_FSTYPSZ"
> >>> to the same point as with "CFLAGS=-m64". In both cases libmpicxx.so
> >>> wasn't available. I have attached the files for this build process
> >>> in the archive mpich-3.2-SunOS.sparc.64_gcc.tar.gz. Please let me
> >>> know if you need anything else.
> >>>
> >>> Kind regards
> >>>
> >>> Siegmar
> >>>
> >>> _______________________________________________
> >>> discuss mailing list discuss at mpich.org
> >>> To manage subscription options or unsubscribe:
> >>> https://lists.mpich.org/mailman/listinfo/discuss
> >>>
> >
<mpich-3.2-SunOS.sparc.64_gcc_disable-cxx.tar.gz>_______________________________
________________
> > discuss mailing list discuss at mpich.org
> > To manage subscription options or unsubscribe:
> > https://lists.mpich.org/mailman/listinfo/discuss
>
> --
> Pavan Balaji ✉ï¸
> http://www.mcs.anl.gov/~balaji
>
>
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