[mpich-discuss] mpich hangs in MPI_Send() - multi threaded environment

Nenad Vukicevic nenad at intrepid.com
Fri Jul 17 18:16:54 CDT 2015


I am having a problem where the system locks up inside the MPI_Send() 
routine.  In my test, each MPI rank has an additional pthread and system 
locks up when:

- main thread does MPI_Recv from ANY rank
- pthread does MPI_Send to another rank

I verified with MPI_Init_thread() that I can run MPI_THREAD_MULTIPLE 
environment.

The same thing happened on MPICH with Fedora 20 (3.0.4) and the one 
build from 3.2b3 sources.  When building from sources I provided 
'--enable-threads=multiple' option.  I also tried to play with 
'--enable-thread-cs' option but got build failure when 'per-object' was 
selected.

Is this supposed to work?

Thanks,
Nenad


I am attaching traces form GDB for the rank that locks up.


(gdb) info thread
   Id   Target Id         Frame
   2    Thread 0x7ffff6a5a700 (LWP 29570) "barrier_test" 
0x0000003ef040bca0 in pthread_cond_wait@@GLIBC_2.3.2 () from 
/usr/lib64/libpthread.so.0
* 1    Thread 0x7ffff7a64b80 (LWP 29568) "barrier_test" 
0x00007ffff7c58717 in MPIU_Thread_CS_yield_lockname_recursive_impl_ (
     lockname=0x7ffff7cdc8b1 "global_mutex", mutex=<optimized out>, 
kind=MPIU_Nest_global_mutex) at ../src/src/include/mpiimplthreadpost.h:190
(gdb) where
#0  0x00007ffff7c58717 in MPIU_Thread_CS_yield_lockname_recursive_impl_ 
(lockname=0x7ffff7cdc8b1 "global_mutex", mutex=<optimized out>,
     kind=MPIU_Nest_global_mutex) at 
../src/src/include/mpiimplthreadpost.h:190
#1  0x00007ffff7c5db42 in MPIDI_CH3I_Progress 
(progress_state=progress_state at entry=0x7fffffffd2c0, 
is_blocking=is_blocking at entry=1)
     at ../src/src/mpid/ch3/channels/nemesis/src/ch3_progress.c:507
#2  0x00007ffff7b5e795 in PMPI_Recv (buf=0x7fffffffd61c, count=1, 
datatype=1275069445, source=-2, tag=299, comm=1140850688, 
status=0x7fffffffd620)
     at ../src/src/mpi/pt2pt/recv.c:157
#3  0x0000000000401732 in receive_int () at comm.c:52
#4  0x0000000000400bf2 in main (argc=1, argv=0x7fffffffd758) at 
barrier_test.c:39
(gdb) thread 2
[Switching to thread 2 (Thread 0x7ffff6a5a700 (LWP 29570))]
#0  0x0000003ef040bca0 in pthread_cond_wait@@GLIBC_2.3.2 () from 
/usr/lib64/libpthread.so.0
(gdb) where
#0  0x0000003ef040bca0 in pthread_cond_wait@@GLIBC_2.3.2 () from 
/usr/lib64/libpthread.so.0
#1  0x00007ffff7c5d614 in MPIDI_CH3I_Progress_delay 
(completion_count=<optimized out>)
     at ../src/src/mpid/ch3/channels/nemesis/src/ch3_progress.c:566
#2  MPIDI_CH3I_Progress 
(progress_state=progress_state at entry=0x7ffff6a59710, 
is_blocking=is_blocking at entry=1)
     at ../src/src/mpid/ch3/channels/nemesis/src/ch3_progress.c:347
#3  0x00007ffff7b632ec in PMPI_Send (buf=0x7ffff6a5985c, count=1, 
datatype=1275069445, dest=0, tag=199, comm=1140850688)
     at ../src/src/mpi/pt2pt/send.c:145
#4  0x0000000000400e42 in barrier_thread_release (id=0) at barrier.c:115
#5  0x0000000000401098 in barrier_helper (arg=0x0) at barrier.c:186
#6  0x0000003ef0407ee5 in start_thread () from /usr/lib64/libpthread.so.0
#7  0x0000003eef8f4d1d in clone () from /usr/lib64/libc.so.6
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