[mpich-discuss] static Linking Error
Min Si
msi at il.is.s.u-tokyo.ac.jp
Mon Nov 30 10:43:00 CST 2015
Hi,
Have you tried to compile a simple hello world C program using the same
options ? It looks like the compiler can not find libc at link time. And
you may need to change "--static" to "-static" in the LDFLAGS option.
Min
On 11/30/15 7:57 AM, Doha Ehab wrote:
> I have retried it using mpich-3.2 and the following command :
>
> ./configure --prefix=/home/doha/mpich-3.2/build/
> CC=/home/doha/buildroot-2015.08.1/output/host/usr/bin/arm-buildroot-linux-uclibcgnueabi-gcc
> CFLAGS="-DHAVE_DEPRECATED_DNS_FUNCS -march=armv5 -mfpu=vfp -fPIC
> -O3 -static" LDFLAGS="--static
> -L/home/doha/buildroot-2015.08.1/output/host/usr/lib/ "
> --host=arm-linux --disable-shared --enable-static
> --with-device=ch3:sock --disable-f77 --disable-fc --disable-fortran
>
> and I got the following errors
>
> jni/../prebuilt/libmpi.a(lib_libmpi_la-errutil.o):errutil.c:function
> checkValidErrcode: error: undefined reference to 'stderr'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-errutil.o):errutil.c:function
> checkForUserErrcode: error: undefined reference to 'stderr'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-errutil.o):errutil.c:function
> MPIR_Err_preOrPostInit: error: undefined reference to 'stderr'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-errutil.o):errutil.c:function
> MPIR_Err_get_string: error: undefined reference to 'stderr'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-dbg_printf.o):dbg_printf.c:function
> MPIU_dbg_printf: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-dbg_printf.o):dbg_printf.c:function
> MPIU_dump_dbg_memlog_to_stdout: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-mpid_vc.o):mpid_vc.c:function
> MPIDI_Populate_vc_node_ids: error: undefined reference to
> '__errno_location'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-mpid_vc.o):mpid_vc.c:function
> MPIDI_Populate_vc_node_ids: error: undefined reference to '__ctype_b'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-mpidi_pg.o):mpidi_pg.c:function
> getConnInfo: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-mpidi_pg.o):mpidi_pg.c:function
> MPIDI_PG_Create: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-sock.o):sock.c:function
> MPIDU_Socki_event_enqueue.isra.1: error: undefined reference to
> '__errno_location'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-sock.o):sock.c:function
> MPIDU_Socki_wakeup.isra.2: error: undefined reference to
> '__errno_location'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-sock.o):sock.c:function
> MPIDU_Sock_SetSockBufferSize: error: undefined reference to
> '__errno_location'
> jni/../prebuilt/libmpi.a(mplenv.o):mplenv.c:function MPL_env2range:
> error: undefined reference to '__ctype_b'
> jni/../prebuilt/libmpi.a(mplenv.o):mplenv.c:function MPL_env2int:
> error: undefined reference to '__ctype_b'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-strerror.o):strerror.c:function
> MPIU_Strerror: error: undefined reference to '__xpg_strerror_r'
> jni/../prebuilt/libmpi.a(lib_libmpi_la-ch3u_handle_connection.o):ch3u_handle_connection.c:function
> MPIDI_CH3U_Get_failed_group: error: undefined reference to '__ctype_b'
>
> any suggestions ?
>
>
>
>
> On Mon, Nov 30, 2015 at 3:11 AM, dave <dave at mynatt.biz
> <mailto:dave at mynatt.biz>> wrote:
>
> Is it possible to upgrade without doing an uninstall of old
> version, yet still keep setup files?
>
> Dave
> ======================
>
>
> On 11/29/2015 05:52 PM, Balaji, Pavan wrote:
>
> Also, can you please try a newer version of mpich? mpich2-1.3
> was released before the big bang. The latest version is
> mpich-3.2.
>
> http://www.mpich.org/downloads/
>
> -- Pavan
>
> On Nov 29, 2015, at 3:26 PM, Min Si
> <msi at il.is.s.u-tokyo.ac.jp
> <mailto:msi at il.is.s.u-tokyo.ac.jp>> wrote:
>
> Hi,
>
> Please try ./configure --prefix=<your installation
> directory> CC=<your compiler> CFLAGS=<your compile flags>
> LDFLAGS=<your link flags> following with other options.
>
> Min
> On 11/29/15 2:22 PM, Doha Ehab wrote:
>
>
> On Sun, Nov 29, 2015 at 2:01 PM, Doha Ehab
> <dohaehab at gmail.com <mailto:dohaehab at gmail.com>> wrote:
> Hello,
> I used buildroot to statically compile MPICH2-1.3 for
> ARM devices using the following commands:
>
> export
> CFLAGS="-I/home/doha/buildroot-2015.05/output/host/usr/include/
> -DHAVE_DEPRECATED_DNS_FUNCS -fPIC -march=armv5
> -mfpu=vfp -O3"
>
> export LDFLAGS="--static
> -L/home/doha/buildroot-2015.05/output/host/usr/lib/ -fPIC"
>
> cc=/home/doha/buildroot-2015.05/output/host/usr/bin/arm-buildroot-linux-uclibcgnueabi-gcc
> ./configure --prefix=/home/doha/mpich/build/
> --host=arm-linux --disable-shared --enable-static
> --with-device=ch3:sock --disable-f77 --disable-fc
>
> when I compile the code using android ndk I get the
> following error
>
> jni/../prebuilt/libmpich.a(msgprint.o):msgprint.c:function
> MPIU_Usage_printf: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpich.a(msgprint.o):msgprint.c:function
> MPIU_Error_printf: error: undefined reference to 'stderr'
> jni/../prebuilt/libmpich.a(msgprint.o):msgprint.c:function
> MPIU_Internal_error_printf: error: undefined reference
> to 'stderr'
> jni/../prebuilt/libmpich.a(msgprint.o):msgprint.c:function
> MPIU_Internal_sys_error_printf: error: undefined
> reference to 'stderr'
> jni/../prebuilt/libmpich.a(msgprint.o):msgprint.c:function
> MPIU_Msg_printf: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpich.a(dbg_printf.o):dbg_printf.c:function
> MPIU_dbg_printf: error: undefined reference to 'stdout'
> jni/../prebuilt/libmpich.a(dbg_printf.o):dbg_printf.c:function
> MPIU_dump_dbg_memlog_to_stdout: error: undefined
> reference to 'stdout'
> jni/../prebuilt/libmpich.a(mpid_abort.o):mpid_abort.c:function
> MPID_Abort: error: undefined reference to 'stderr'
> jni/../prebuilt/libmpich.a(mpid_vc.o):mpid_vc.c:function
> MPIDI_Populate_vc_node_ids: error: undefined reference
> to '__errno_location'
> jni/../prebuilt/libmpich.a(mpid_vc.o):mpid_vc.c:function
> MPIDI_Populate_vc_node_ids: error: undefined reference
> to '__ctype_b'
> jni/../prebuilt/libmpich.a(strerror.o):strerror.c:function
> MPIU_Strerror: error: undefined reference to
> '__xpg_strerror_r'
> jni/../prebuilt/libmpich.a(simple_pmi.o):simple_pmi.c:function
> accept_one_connection: error: undefined reference to
> '__errno_location'
> jni/../prebuilt/libmpich.a(simple_pmi.o):simple_pmi.c:function
> PMI_Init: error: undefined reference to '__errno_location'
> jni/../prebuilt/libmpich.a(sock.o):sock.c:function
> MPIDU_Socki_event_enqueue.isra.1: error: undefined
> reference to '__errno_location'
> jni/../prebuilt/libmpl.a(mplenv.o):mplenv.c:function
> MPL_env2range: error: undefined reference to '__ctype_b'
> jni/../prebuilt/libmpl.a(mplenv.o):mplenv.c:function
> MPL_env2int: error: undefined reference to '__ctype_b'
> I want to know what I'm missing and why it is not
> linking properly
>
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