[mpich-discuss] undefined symbol: MPI_UNWEIGHTED
Kenneth Raffenetti
raffenet at mcs.anl.gov
Wed Aug 10 11:55:42 CDT 2016
Hi Robert,
Apologies for the delayed response. I'm unable to reproduce this on a
CentOS 6 machine so far. Can you run ldd against your hello world
binaries to double check the linkage? The MPI_UNWEIGHTED symbol should
be resolved in the libmpi.so library by the inter-library dependency.
Ken
On 08/02/2016 02:00 PM, Robert Baurle wrote:
> Sorry, I should have also stated that /opt/mpich is a symbolic link to
> /opt/mpich_gfc. I define /opt/mpich to be a symbolic link to either:
>
> /opt/mpich_gfc
>
> or
>
> /opt/mpich_lahey
>
> depending on which Fortran90 compiler I want to use. I currently have
> /opt/mpich symbolically linked to /opt/mpich_gfc, and /opt/mpich is
> defined in my paths as shown below
>
> hyp22 rbaurle > echo $LD_LIBRARY_PATH
> /usr/lib64/atlas:/opt/tecplotex/bin:/opt/mpich/lib:/opt/lahey-64/lib64:/usr/local/lib
>
>
> hyp22 rbaurle > echo $PATH
> /home/rbaurle/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/bin:/sbin:/opt/lahey-64/bin:/opt/tecplot/bin:/opt/gridpro/bin:/opt/mpich/bin:.:/home/rbaurle/Vulcan/vulcan.bzr/Vulcan/Scripts
>
>
>
> Rob
>
> On 08/02/2016 02:48 PM, Halim Amer wrote:
>> you are probably linking to the wrong MPICH. You installed MPICH to
>> /opt/mpich_gfc but the error occurs for MPICH installed at /opt/mpich.
>>
>> Do you have /opt/mpich in LD_LIBRARY_PATH? If that's the case, then
>> you should remove it or place /opt/mpich_gfc before it.
>>
>> --Halim
>>
>> www.mcs.anl.gov/~aamer
>>
>> On 8/2/16 11:33 AM, Robert Baurle wrote:
>>> Hello,
>>>
>>> I have installed MPICH 3.2 on a CENTOS 6 machine with the following
>>> configuration options:
>>>
>>> setenv CC /usr/bin/gcc
>>> setenv FC /usr/bin/gfortran
>>> setenv CXX /usr/bin/c++
>>> setenv INS_DIR /opt/mpich_gfc
>>>
>>> ../mpich-3.2/configure --prefix=$INS_DIR --with-device=ch3:nemesis |&
>>> tee configure.log
>>>
>>> make --jobs 4 |& tee make.log
>>>
>>> make install
>>>
>>> and the installation appeared to have completed without error (see the
>>> attached configure.log and make.log files). However, when I attempt to
>>> run a simple hello_world FORTRAN 90 program, I get the following error:
>>>
>>> hyp22 rbaurle 2293> mpirun -n 3 a.out < hello.inp
>>> a.out: symbol lookup error: /opt/mpich/lib/libmpifort.so.12: undefined
>>> symbol: MPI_UNWEIGHTED
>>>
>>> If I repeat the installation, but change the Fortran90 compiler from
>>> GFORTRAN to the Lahey 8.1 compiler, i.e.:
>>>
>>> setenv FC /opt/lahey-64/bin/lf95
>>>
>>> then the hello_world program runs just fine. Do you have any idea what
>>> might be going on here? I should also mention that the same error
>>> appears if I install MPICH 3.1.3.
>>>
>>> Thanks,
>>>
>>> Rob
>>>
>>>
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