[mpich-discuss] Error buildingmpich-master-v3.2-88-gbbb40df74d46

Siegmar Gross Siegmar.Gross at informatik.hs-fulda.de
Sat Jan 16 08:44:22 CST 2016 

Hi Rob,

today I tried to build version 77592165aa3, but I got
the same errors for a different file so that it seems
that the problem has nothing to do with the reorganization.
Can I help with anything else?

loki x 133 cat mpich/.git/HEAD
ref: refs/heads/3.2.1-77592165aa3

loki x 105 cat mpich-Linux.x86_64.64_gcc/log.make.Linux.x86_64.64_gcc
if test ! -h ./src/include/mpio.h ; then \
     rm -f ./src/include/mpio.h ; \
     ( cd ./src/include &&       \
         ln -s ../mpi/romio/include/mpio.h ) ; \
fi
make  all-recursive
make[1]: Entering directory '/export2/src/mpich-3.2.1/x/mpich-Linux.x86_64.64_gcc'
Making all in /export2/src/mpich-3.2.1/x/mpich-Linux.x86_64.64_gcc/src/mpl
make[2]: Entering directory 
'/export2/src/mpich-3.2.1/x/mpich-Linux.x86_64.64_gcc/src/mpl'
   CC       src/mplstr.lo
   CC       src/mpltrmem.lo
   CC       src/mplenv.lo
   CC       src/mplmsg.lo
   CC       src/mplsock.lo
   CC       src/mplutil.lo
../../../mpich/src/mpl/src/mplutil.c: In function ‘backtrace_libunwind’:
../../../mpich/src/mpl/src/mplutil.c:50:5: error: unknown type name ‘unw_cursor_t’
      unw_cursor_t cursor;
      ^
../../../mpich/src/mpl/src/mplutil.c:51:5: error: unknown type name 
‘unw_context_t’
      unw_context_t uc;
      ^
...


Best regards

Siegmar


Am 15.01.2016 um 13:45 schrieb Siegmar Gross:
> Hi Halim, hi Rob,
>
> I've checked out version 77592165aa3, but at the moment I cannot
> use it, because we have only libtool-2.4.2 and you need at least
> libtool-2.4.4 so that autogen.sh failed. Our admin tries to
> install the latest versions of all necessary tools. I don't know
> if he succeeds today, because his working hours are over in 45
> minutes. I'll try as soon as possible.
>
>
> Best regards
>
> Siegmar
>
>
> On 01/14/16 17:33, Halim Amer wrote:
>> you can check out that version from our git repo:
>> git clone http://git.mpich.org/mpich.git
>> cd mpich
>> git checkout 77592165aa3
>>
>> --Halim
>> www.mcs.anl.gov/~aamer
>>
>> On 1/14/16 9:52 AM, Siegmar Gross wrote:
>>> Hi,
>>>
>>> where can I find "version 77592165aa3"? I have only the following
>>> archives after the release of mpich-3.2.tar.gz.
>>>
>>> loki mpich-3.2.1 113 ls -C1 *.gz
>>> mpich-master-v3.2-42-g67631a5c0e9e.tar.gz
>>> mpich-master-v3.2-87-g7150bbc02ec8.tar.gz
>>> mpich-master-v3.2-88-gbbb40df74d46.tar.gz
>>>
>>> I've attached both config.log files from my gcc and cc version.
>>>
>>> I've searched for "libunwind tools" for our Linux version. It seems that
>>> they are available for "Suse Linux Enterprise Server", but I didn't find
>>> them for "Suse Linux Enterprise Desktop", which we use for most of our
>>> machines. Shall I ask our Admin to install them?
>>>
>>>
>>> Best regards
>>>
>>> Siegmar
>>>
>>>
>>> On 01/14/16 16:25, Rob Latham wrote:
>>>>
>>>>
>>>> On 01/14/2016 07:21 AM, Siegmar Gross wrote:
>>>>> Hi,
>>>>>
>>>>> today I tried to build mpich-master-v3.2-88-gbbb40df74d46 on my machine
>>>>> (SUSE Linux Enterprise Server 12.0 x86_64) with gcc-5.2.0 and Sun C
>>>>> 5.13.
>>>>> I used the following command to build the system for gcc.
>>>>
>>>> This looks like the "portable backtrace" functionality I added
>>>> recently.   Maybe I need to work on the "portable" part
>>>> of that.
>>>>
>>>> MPICH thinks your environment has the libunwind tools, and so it is
>>>> trying to use libunwind to display the backtrace.
>>>>
>>>> Unfortunately there's one more complication: a reorganization of the
>>>> MPL sources (commit 12c912ec6372).
>>>>
>>>> If you can provide me with two pieces of information that would be great:
>>>>
>>>> - what if you check out MPICH from a few weeks back?  I want to rule
>>>> out the source reorg, and if you check out version
>>>> 77592165aa3, that will have just my changes and none of the reorg
>>>> changes.
>>>>
>>>> - Can you send me your src/mpl/config.log ? (not the config.log from
>>>> top-level mpich, but the config.log subconfigure
>>>> from src/mpl)  I would like to see what backtrace libraries configure
>>>> found in your environment.   Then I can reproduce
>>>> it on my end.
>>>>
>>>> ==rob
>>>>
>>>>>
>>>>> mkdir
>>>>> mpich-master-v3.2-88-gbbb40df74d46-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc
>>>>> cd
>>>>> mpich-master-v3.2-88-gbbb40df74d46-${SYSTEM_ENV}.${MACHINE_ENV}.64_gcc
>>>>>
>>>>> ../mpich-master-v3.2-88-gbbb40df74d46/configure \
>>>>>    --prefix=/usr/local/mpich-3.2.1_64_gcc \
>>>>>    --libdir=/usr/local/mpich-3.2.1_64_gcc/lib64 \
>>>>>    --includedir=/usr/local/mpich-3.2.1_64_gcc/include64 \
>>>>>    CC="gcc" CXX="g++" F77="gfortran" FC="gfortran" \
>>>>>    CFLAGS="-m64 -z noexecstack" CXXFLAGS="-m64" FFLAGS="-m64"
>>>>> FCFLAGS="-m64" \
>>>>>    LDFLAGS="-m64" \
>>>>>    --enable-fortran=yes --enable-cxx --enable-romio \
>>>>>    --enable-debuginfo --enable-smpcoll \
>>>>>    --enable-threads=multiple --with-thread-package=posix \
>>>>>    --enable-shared \
>>>>>    |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc
>>>>>
>>>>> make |& tee log.make.$SYSTEM_ENV.$MACHINE_ENV.64_gcc
>>>>>
>>>>>
>>>>> "make" broke with the following error for "cc".
>>>>>
>>>>> loki mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc 111 cat
>>>>> log.make.Linux.x86_64.64_cc
>>>>> if test ! -h ./src/include/mpio.h ; then \
>>>>>      rm -f ./src/include/mpio.h ; \
>>>>>      ( cd ./src/include &&       \
>>>>>          ln -s ../mpi/romio/include/mpio.h ) ; \
>>>>> fi
>>>>> make  all-recursive
>>>>> make[1]: Entering directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc'
>>>>>
>>>>>
>>>>>
>>>>> Making all in
>>>>> /export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc/src/mpl
>>>>>
>>>>>
>>>>>
>>>>> make[2]: Entering directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc/src/mpl'
>>>>>
>>>>>
>>>>>
>>>>>    CC       src/bt/mpl_bt.lo
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 50: undefined symbol: unw_cursor_t
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 50: syntax error before or at: cursor
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 51: undefined symbol: unw_context_t
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 52: undefined symbol: unw_word_t
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 57: warning: implicit function declaration: unw_getcontext
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 57: undefined symbol: uc
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 58: warning: implicit function declaration: unw_init_local
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 58: undefined symbol: cursor
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 59: warning: implicit function declaration: unw_step
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 60: warning: implicit function declaration: unw_get_reg
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 60: undefined symbol: UNW_REG_IP
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 60: undefined symbol: ip
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 61: warning: implicit function declaration: unw_get_proc_name
>>>>> "../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c",
>>>>> line 62: undefined symbol: offset
>>>>> cc: acomp failed for
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c
>>>>> Makefile:923: recipe for target 'src/bt/mpl_bt.lo' failed
>>>>> make[2]: *** [src/bt/mpl_bt.lo] Error 1
>>>>> make[2]: Leaving directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc/src/mpl'
>>>>>
>>>>>
>>>>>
>>>>> Makefile:38434: recipe for target 'all-recursive' failed
>>>>> make[1]: *** [all-recursive] Error 1
>>>>> make[1]: Leaving directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc'
>>>>>
>>>>>
>>>>>
>>>>> Makefile:10304: recipe for target 'all' failed
>>>>> make: *** [all] Error 2
>>>>> loki mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_cc 112
>>>>>
>>>>>
>>>>>
>>>>> "make" broke with the following error for "gcc".
>>>>>
>>>>> loki mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc 114 cat
>>>>> log.make.Linux.x86_64.64_gcc
>>>>> if test ! -h ./src/include/mpio.h ; then \
>>>>>      rm -f ./src/include/mpio.h ; \
>>>>>      ( cd ./src/include &&       \
>>>>>          ln -s ../mpi/romio/include/mpio.h ) ; \
>>>>> fi
>>>>> make  all-recursive
>>>>> make[1]: Entering directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc'
>>>>>
>>>>>
>>>>>
>>>>> Making all in
>>>>> /export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc/src/mpl
>>>>>
>>>>>
>>>>>
>>>>> make[2]: Entering directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc/src/mpl'
>>>>>
>>>>>
>>>>>
>>>>>    CC       src/bt/mpl_bt.lo
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c: In
>>>>> function ‘backtrace_libunwind’:
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:50:5:
>>>>> error:
>>>>> unknown type name ‘unw_cursor_t’
>>>>>       unw_cursor_t cursor;
>>>>>       ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:51:5:
>>>>> error:
>>>>> unknown type name ‘unw_context_t’
>>>>>       unw_context_t uc;
>>>>>       ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:52:5:
>>>>> error:
>>>>> unknown type name ‘unw_word_t’
>>>>>       unw_word_t ip, offset;
>>>>>       ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:57:5:
>>>>> warning:
>>>>> implicit declaration of function ‘unw_getcontext’
>>>>> [-Wimplicit-function-declaration]
>>>>>       unw_getcontext(&uc);
>>>>>       ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:58:5:
>>>>> warning:
>>>>> implicit declaration of function ‘unw_init_local’
>>>>> [-Wimplicit-function-declaration]
>>>>>       unw_init_local(&cursor, &uc);
>>>>>       ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:59:12:
>>>>>
>>>>> warning: implicit declaration of function ‘unw_step’
>>>>> [-Wimplicit-function-declaration]
>>>>>       while (unw_step(&cursor) > 0) {
>>>>>              ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:60:9:
>>>>> warning:
>>>>> implicit declaration of function ‘unw_get_reg’
>>>>> [-Wimplicit-function-declaration]
>>>>>           unw_get_reg(&cursor, UNW_REG_IP, &ip);
>>>>>           ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:60:30:
>>>>>
>>>>> error: ‘UNW_REG_IP’ undeclared (first use in this function)
>>>>>           unw_get_reg(&cursor, UNW_REG_IP, &ip);
>>>>>                                ^
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:60:30:
>>>>>
>>>>> note: each undeclared identifier is reported only once for each function
>>>>> it appears in
>>>>> ../../../mpich-master-v3.2-88-gbbb40df74d46/src/mpl/src/bt/mpl_bt.c:61:9:
>>>>> warning:
>>>>> implicit declaration of function ‘unw_get_proc_name’
>>>>> [-Wimplicit-function-declaration]
>>>>>           unw_get_proc_name(&cursor, buffer,
>>>>>           ^
>>>>> Makefile:920: recipe for target 'src/bt/mpl_bt.lo' failed
>>>>> make[2]: *** [src/bt/mpl_bt.lo] Error 1
>>>>> make[2]: Leaving directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc/src/mpl'
>>>>>
>>>>>
>>>>>
>>>>> Makefile:38434: recipe for target 'all-recursive' failed
>>>>> make[1]: *** [all-recursive] Error 1
>>>>> make[1]: Leaving directory
>>>>> '/export2/src/mpich-3.2.1/mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc'
>>>>>
>>>>>
>>>>>
>>>>> Makefile:10304: recipe for target 'all' failed
>>>>> make: *** [all] Error 2
>>>>> loki mpich-master-v3.2-88-gbbb40df74d46-Linux.x86_64.64_gcc 114
>>>>>
>>>>>
>>>>>
>>>>> I would be grateful if somebody can fix the problem. Thank you very
>>>>> much for any help in advance.
>>>>>
>>>>>
>>>>> Kind regards
>>>>>
>>>>> Siegmar
>>>>> _______________________________________________
>>>>> discuss mailing list     discuss at mpich.org
>>>>> To manage subscription options or unsubscribe:
>>>>> https://lists.mpich.org/mailman/listinfo/discuss
>>>> _______________________________________________
>>>> discuss mailing list     discuss at mpich.org
>>>> To manage subscription options or unsubscribe:
>>>> https://lists.mpich.org/mailman/listinfo/discuss
>>>
>>>
>>> _______________________________________________
>>> discuss mailing list     discuss at mpich.org
>>> To manage subscription options or unsubscribe:
>>> https://lists.mpich.org/mailman/listinfo/discuss
>>>
>> _______________________________________________
>> discuss mailing list     discuss at mpich.org
>> To manage subscription options or unsubscribe:
>> https://lists.mpich.org/mailman/listinfo/discuss
> _______________________________________________
> discuss mailing list     discuss at mpich.org
> To manage subscription options or unsubscribe:
> https://lists.mpich.org/mailman/listinfo/discuss
_______________________________________________
discuss mailing list     discuss at mpich.org
To manage subscription options or unsubscribe:
https://lists.mpich.org/mailman/listinfo/discuss

More information about the discuss mailing list