[mpich-discuss] [EXTERNAL] Re: Help building MPICH as shared library with NAG Fortran and Clang

Tue Jan 18 13:44:29 CST 2022

Hui,

Yeah. That is my current thought.

Now, I do have libtool installed via Brew and maybe that's the issue, but try as I may by moving around that file/symlink, I can't seem to avoid this...or maybe autotools is just *really* good at finding it no matter what I do?[1]

I had hoped maybe the Spack folks had a workaround, but the only nag+mpich patches they have:

https://github.com/spack/spack/tree/develop/var/spack/repos/builtin/packages/mpich

seem to either be in mpich 4.0rc3 or not related to this!

Matt

[1] I thought about `brew uninstall libtool` but that uninstalls a *lot* of other packages. And a brew-less environment sort of breaks my fancy terminal environment! :)

--
Matt Thompson, SSAI, Ld Scientific Programmer/Analyst
NASA GSFC,    Global Modeling and Assimilation Office
Code 610.1,  8800 Greenbelt Rd,  Greenbelt,  MD 20771
Phone: 301-614-6712                 Fax: 301-614-6246
http://science.gsfc.nasa.gov/sed/bio/matthew.thompson

From: "Zhou, Hui" <zhouh at anl.gov>
Date: Tuesday, January 18, 2022 at 2:16 PM
To: "discuss at mpich.org" <discuss at mpich.org>
Cc: "Thompson, Matt (GSFC-610.1)[SCIENCE SYSTEMS AND APPLICATIONS INC]" <matthew.thompson at nasa.gov>
Subject: [EXTERNAL] Re: Help building MPICH as shared library with NAG Fortran and Clang

Hi Matt,

I suspect this is an issue in libtool. We'll take a look at it. We routinely test NAG compiler, but I guess we never tried clang+NAG. Once we figure out the issue, we typically will maintain custom patches to libtool until libtool fixes it upstream.

--
Hui Zhou
________________________________
From: Thompson, Matt (GSFC-610.1)[SCIENCE SYSTEMS AND APPLICATIONS INC] via discuss <discuss at mpich.org>
Sent: Tuesday, January 18, 2022 12:49 PM
To: discuss at mpich.org <discuss at mpich.org>
Cc: Thompson, Matt (GSFC-610.1)[SCIENCE SYSTEMS AND APPLICATIONS INC] <matthew.thompson at nasa.gov>
Subject: [mpich-discuss] Help building MPICH as shared library with NAG Fortran and Clang

All,

As the subject says, I'm having issues building MPICH as a shared library with NAG Fortran and Clang on my MacBook.

I configured mpich as:

../configure FCFLAGS="-mismatch_all -fpp" FFLAGS="-mismatch_all -fpp" --prefix=$HOME/installed/Compiler/nag-7.0_7066/mpich/4.0rc3 |& tee configure.nag-7.0_7066.log

where CC=clang, CXX=clang++, and FC=nagfor (set in environment). When I do this, the configure step is fine, but upon build:

make[2]: Entering directory '/Users/mathomp4/src/MPI/mpich-4.0rc3/build-nag-7.0_7066'

  GEN      lib/libmpifort.la

NAG Fortran Compiler Release 7.0(Yurakucho) Build 7066

Option error: Unrecognised option -dynamiclib

make[2]: *** [Makefile:7606: lib/libmpifort.la] Error 2

make[2]: Leaving directory '/Users/mathomp4/src/MPI/mpich-4.0rc3/build-nag-7.0_7066'

make[1]: *** [Makefile:30237: all-recursive] Error 1

make[1]: Leaving directory '/Users/mathomp4/src/MPI/mpich-4.0rc3/build-nag-7.0_7066'

make: *** [Makefile:7300: all] Error 2

The issue seems to be that MPICH (or libtool?) assumes that flags that clang accepts will be accepted by the Fortran compiler as well. But NAG doesn't accept '-dynamiclib' as an option. (I am asking NAG about this as well.)

I can kind of see places where this is happening. For example in config.status:

749:archive_cmds_FC='$CC -dynamiclib $allow_undefined_flag -o $lib $libobjs $deplibs $compiler_flags -install_name $rpath/$soname $verstring $single_module'

Now, the interesting thing is this *exact same* issue happened to me with Open MPI:

https://www.mail-archive.com/users@lists.open-mpi.org//msg34635.html<https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.mail-archive.com%2Fusers%40lists.open-mpi.org%2Fmsg34635.html&data=04%7C01%7Cmatthew.thompson%40nasa.gov%7C1b3d9ba46d434dc76bea08d9dab71612%7C7005d45845be48ae8140d43da96dd17b%7C0%7C0%7C637781302163806283%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=ua0iqGGzgrCOF70TeLqZSRambN%2BRkKx5XihYWxyck8U%3D&reserved=0>

On that thread, I eventually figured out how to build Open MPI as static, but now I ran into this:

https://discourse.cmake.org/t/cmake-and-mpi-fortran-cmake-doesnt-see-it/4869

My fear is that if I try and build MPICH as a static library, the same thing will happen.

Does anyone at MPICH have any thoughts on this?

Thanks,
Matt

--

Matt Thompson, SSAI, Ld Scientific Programmer/Analyst

NASA GSFC,    Global Modeling and Assimilation Office

Code 610.1,  8800 Greenbelt Rd,  Greenbelt,  MD 20771

Phone: 301-614-6712                 Fax: 301-614-6246

http://science.gsfc.nasa.gov/sed/bio/matthew.thompson
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