[mpich-discuss] "undefined references"

Hana Milani hana.milani at yahoo.com
Mon Jul 8 08:25:54 CDT 2013


Hello,

I have compiled a code (siesta) by mpich2, blacs, lapack, blas and scalapack. It works fine under grid computation. But when I want to "make" a utility, I receive the following errors:

[Home at localhost Gen-basis]$ make
/usr/local/bin/mpif90          -o gen-basis \
        alloc.o basis_types.o precision.o recipes.o parallel.o parsing.o xcmod.o basis_io.o  chemical.o atm_transfer.o atm_types.o atmparams.o old_atmfuncs.o radial.o io.o paste.o  flib_spline.o bessph.o  m_filter.o basis_specs.o atom.o memoryinfo.o memory.o periodic_table.o pseudopotential.o pxf.o dot.o xc.o  atom_options.o arw.o sys.o timer.o  xml.o m_walltime.o gen-basis.o nag.o libfdf.a  /home/Home/Packages/scalapack-2.0.2/libscalapack.a /home/Home/Packages/BLACS/LIB/blacsCinit_MPI-LINUX-0.a /home/Home/Packages/BLACS/LIB/blacsF77init_MPI-LINUX-0.a /home/Home/Packages/BLACS/LIB/blacs_MPI-LINUX-0.a /home/Home/Packages/lapack-3.4.2/liblapack.a /home/Home/Packages/BLAS/blas_LINUX.a 
alloc.o: In function `print_report':
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1705: undefined reference to `__mpi__r8_s_MOD_mpi_reduce_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1707: undefined reference to `__mpi__r8_v_MOD_mpi_reduce_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1711: undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1723: undefined reference to `__mpi__r8_s_MOD_mpi_recv_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1718: undefined reference to `__mpi__r8_s_MOD_mpi_send_t'
alloc.o: In function `__alloc_MOD_alloc_report':
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:318: undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:319: undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:320: undefined reference to `__mpi__character_s_MOD_mpi_bcast_t'
xcmod.o: In function `__xcmod_MOD_setxc':
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:136: undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:138: undefined reference to `__mpi__character_v_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:140: undefined reference to `__mpi__character_v_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:142: undefined reference to `__mpi__r8_v_MOD_mpi_bcast_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:144: undefined reference to `__mpi__r8_v_MOD_mpi_bcast_t'
memory.o: In function `printmemory_':
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/memory.F:144: undefined reference to `__mpi__integer_s_MOD_mpi_allreduce_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/memory.F:167: undefined reference to `__mpi__integer_sv_MOD_mpi_gather_t'
timer.o: In function `timer1_':
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/timer.F:117: undefined reference to `__mpi__r8_s_MOD_mpi_allreduce_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/timer.F:164: undefined reference to `__mpi__r8_v_MOD_mpi_reduce_t'
/home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/timer.F:139: undefined reference to `__mpi__r8_v_MOD_mpi_reduce_t'
collect2: error: ld returned 1 exit status
make: *** [gen-basis] Error 1


I will be really grateful if you kindly help me to solve this problem.
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