[mpich-discuss] "undefined references"

[Pavan Balaji]

This doesn't look like an MPI error.  Did you contact the authors of 
whatever package you are trying to compile?

  -- Pavan

On 07/08/2013 08:25 AM, Hana Milani wrote:
> Hello,
>
> I have compiled a code (siesta) by mpich2, blacs, lapack, blas and
> scalapack. It works fine under grid computation. But when I want to
> "make" a utility, I receive the following errors:
>
> [Home at localhost Gen-basis]$ make
> /usr/local/bin/mpif90          -o gen-basis \
>          alloc.o basis_types.o precision.o recipes.o parallel.o
> parsing.o xcmod.o basis_io.o  chemical.o atm_transfer.o atm_types.o
> atmparams.o old_atmfuncs.o radial.o io.o paste.o  flib_spline.o
> bessph.o  m_filter.o basis_specs.o atom.o memoryinfo.o memory.o
> periodic_table.o pseudopotential.o pxf.o dot.o xc.o  atom_options.o
> arw.o sys.o timer.o  xml.o m_walltime.o gen-basis.o nag.o libfdf.a
> /home/Home/Packages/scalapack-2.0.2/libscalapack.a
> /home/Home/Packages/BLACS/LIB/blacsCinit_MPI-LINUX-0.a
> /home/Home/Packages/BLACS/LIB/blacsF77init_MPI-LINUX-0.a
> /home/Home/Packages/BLACS/LIB/blacs_MPI-LINUX-0.a
> /home/Home/Packages/lapack-3.4.2/liblapack.a
> /home/Home/Packages/BLAS/blas_LINUX.a
> alloc.o: In function `print_report':
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1705:
> undefined reference to `__mpi__r8_s_MOD_mpi_reduce_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1707:
> undefined reference to `__mpi__r8_v_MOD_mpi_reduce_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1711:
> undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1723:
> undefined reference to `__mpi__r8_s_MOD_mpi_recv_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:1718:
> undefined reference to `__mpi__r8_s_MOD_mpi_send_t'
> alloc.o: In function `__alloc_MOD_alloc_report':
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:318:
> undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:319:
> undefined reference to `__mpi__integer_s_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/alloc.F90:320:
> undefined reference to `__mpi__character_s_MOD_mpi_bcast_t'
> xcmod.o: In function `__xcmod_MOD_setxc':
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:136: undefined
> reference to `__mpi__integer_s_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:138: undefined
> reference to `__mpi__character_v_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:140: undefined
> reference to `__mpi__character_v_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:142: undefined
> reference to `__mpi__r8_v_MOD_mpi_bcast_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/xcmod.F:144: undefined
> reference to `__mpi__r8_v_MOD_mpi_bcast_t'
> memory.o: In function `printmemory_':
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/memory.F:144:
> undefined reference to `__mpi__integer_s_MOD_mpi_allreduce_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/memory.F:167:
> undefined reference to `__mpi__integer_sv_MOD_mpi_gather_t'
> timer.o: In function `timer1_':
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/timer.F:117: undefined
> reference to `__mpi__r8_s_MOD_mpi_allreduce_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/timer.F:164: undefined
> reference to `__mpi__r8_v_MOD_mpi_reduce_t'
> /home/Home/Packages/siesta-TEST-3.2/Util/Gen-basis/../../Src/timer.F:139: undefined
> reference to `__mpi__r8_v_MOD_mpi_reduce_t'
> collect2: error: ld returned 1 exit status
> make: *** [gen-basis] Error 1
>
> I will be really grateful if you kindly help me to solve this problem.
>
>
> _______________________________________________
> discuss mailing list     discuss at mpich.org
> To manage subscription options or unsubscribe:
> https://lists.mpich.org/mailman/listinfo/discuss
>

-- 
Pavan Balaji
http://www.mcs.anl.gov/~balaji