[mpich-discuss] mpirun not running in batch mode.

Francisco Pastor paco at ceam.es
Fri Jun 13 04:54:28 CDT 2014


Sorry, I thought it was publicly shared. Here you have crontab output

Run from crontab

/home/meteo
ldd: faltan los ficheros de argumentos/(missing argument files)/
Pruebe `ldd --help' para más información./(ldd --help for mor info)/
core file size          (blocks, -c) 0
data seg size           (kbytes, -d) unlimited
scheduling priority             (-e) 0
file size               (blocks, -f) unlimited
pending signals                 (-i) 31550
max locked memory       (kbytes, -l) 64
max memory size         (kbytes, -m) unlimited
open files                      (-n) 1024
pipe size            (512 bytes, -p) 8
POSIX message queues     (bytes, -q) 819200
real-time priority              (-r) 0
stack size              (kbytes, -s) 8192
cpu time               (seconds, -t) unlimited
max user processes              (-u) 31550
virtual memory          (kbytes, -v) unlimited
file locks                      (-x) unlimited
/home/meteo/prova: línea 12: mpirun: orden no encontrada/(mpirun not found)


/


El 13/06/2014 11:39, Gilles Gouaillardet escribió:
> Francisco,
>
> i cannot access to the vernote.com web site :-(
>
> anyway, you can try to add the following two lines :
>
> export PATH=/usr/local/mpich2-1.0.5/bin:$PATH
> export LD_LIBRARY_PATH=/usr/local/mpich2-1.0.5/lib:$LD_LIBRARY_PATH
>
> at the beginning of your cron script and try again
>
> Cheers,
>
> Gilles
>
> On 2014/06/13 18:44, Francisco Pastor wrote:
>> I tried what you said and it seems you are right about environment. In
>> the case run from crontab there is an error message telling mpirun is
>> not found and a warning:
>>
>> "ldd: faltan los ficheros de argumentos /(missing argument files)"/
>>
>> You can see full output of shell, at and crontab in:
>>
>>   https://www.evernote.com/shard/s162/sh/641d8db6-9252-49f5-b7d7-3592e0591c2f/f0bccdd25e1b5ac444879b6212f34912
>>
>>
>> Should I add export PATH=/usr/local/mpich2-1.0.5 to the script? I'm
>> gonna try. What about the ldd message?
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-- 
-----------
Dr. Francisco Pastor
Meteorology department, Instituto Universitario CEAM-UMH
http://www.ceam.es
-----------
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