[mpich-discuss] mpif.h

fereshteh komijani fereshtehkomijani at gmail.com
Sat Sep 13 08:41:23 CDT 2014 

i have created hello.F90 and after compiling, it gives

fkomijani at fk1:~/program_install/COAWST$ mpif90 -v -o hello hello.F90
mpif90 for MPICH version 3.0.4
Driving: gfortran -v -o hello hello.F90
-I/home/fkomijani/program_install/mpich-3.0.4/include
-I/home/fkomijani/program_install/mpich-3.0.4/include
-L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90 -lmpich -lopa
-lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/4.6/lto-wrapper
Target: i686-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro
4.6.3-1ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr
--program-suffix=-4.6 --enable-shared --enable-linker-build-id
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6
--libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
--enable-libstdcxx-debug --enable-libstdcxx-time=yes
--enable-gnu-unique-object --enable-plugin --enable-objc-gc
--enable-targets=all --disable-werror --with-arch-32=i686
--with-tune=generic --enable-checking=release --build=i686-linux-gnu
--host=i686-linux-gnu --target=i686-linux-gnu
Thread model: posix
gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5)
COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include'
'-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
'-mtune=generic' '-march=i686'
 /usr/lib/gcc/i686-linux-gnu/4.6/f951 hello.F90 -cpp=/tmp/ccgJjtSb.f90
-quiet -v -I /home/fkomijani/program_install/mpich-3.0.4/include -I
/home/fkomijani/program_install/mpich-3.0.4/include -imultilib .
-imultiarch i386-linux-gnu hello.F90 -quiet -dumpbase hello.F90
-mtune=generic -march=i686 -auxbase hello -version -fintrinsic-modules-path
/usr/lib/gcc/i686-linux-gnu/4.6/finclude -o /tmp/ccV5Pu7p.s
GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) version 4.6.3 (i686-linux-gnu)
    compiled by GNU C version 4.6.3, GMP version 5.0.2, MPFR version
3.1.0-p3, MPC version 0.9
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
ignoring nonexistent directory "/usr/local/include/i386-linux-gnu"
ignoring nonexistent directory
"/usr/lib/gcc/i686-linux-gnu/4.6/../../../../i686-linux-gnu/include"
ignoring duplicate directory
"/home/fkomijani/program_install/mpich-3.0.4/include"
#include "..." search starts here:
#include <...> search starts here:
 /home/fkomijani/program_install/mpich-3.0.4/include
 /usr/lib/gcc/i686-linux-gnu/4.6/finclude
 /usr/lib/gcc/i686-linux-gnu/4.6/include
 /usr/local/include
 /usr/lib/gcc/i686-linux-gnu/4.6/include-fixed
 /usr/include/i386-linux-gnu
 /usr/include
End of search list.
GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) version 4.6.3 (i686-linux-gnu)
    compiled by GNU C version 4.6.3, GMP version 5.0.2, MPFR version
3.1.0-p3, MPC version 0.9
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include'
'-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
'-mtune=generic' '-march=i686'
 as --32 -o /tmp/ccPO4WoE.o /tmp/ccV5Pu7p.s
Reading specs from /usr/lib/gcc/i686-linux-gnu/4.6/libgfortran.spec
rename spec lib to liborig
COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include'
'-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
'-mtune=generic' '-march=i686'
COMPILER_PATH=/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/
LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
'/home/fkomijani/program_install/mpich-3.0.4/include'
'-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
'-mtune=generic' '-march=i686'
 /usr/lib/gcc/i686-linux-gnu/4.6/collect2 --sysroot=/ --build-id
--no-add-needed --as-needed --eh-frame-hdr -m elf_i386 --hash-style=gnu
-dynamic-linker /lib/ld-linux.so.2 -z relro -o hello
/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crt1.o
/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crti.o
/usr/lib/gcc/i686-linux-gnu/4.6/crtbegin.o
-L/home/fkomijani/program_install/mpich-3.0.4/lib
-L/usr/lib/gcc/i686-linux-gnu/4.6
-L/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu
-L/usr/lib/gcc/i686-linux-gnu/4.6/../../../../lib -L/lib/i386-linux-gnu
-L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib
-L/usr/lib/gcc/i686-linux-gnu/4.6/../../.. /tmp/ccPO4WoE.o -lmpichf90
-lmpich -lopa -lmpl -lrt -lpthread -lgfortran -lm -lgcc_s -lgcc -lquadmath
-lm -lgcc_s -lgcc -lc -lgcc_s -lgcc
/usr/lib/gcc/i686-linux-gnu/4.6/crtend.o
/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crtn.o


On Sat, Sep 13, 2014 at 5:28 PM, Junchao Zhang <jczhang at mcs.anl.gov> wrote:

> "gfortran: error: hello.F90: No such file or directory"
> You need to create hello.F90 as I said in the previous email.
>
> "mpif90 -v -o hello hello.F90 ./coawst.bash"
> Also, do not add ./coawst.bash
>
>
>
> --Junchao Zhang
>
> On Sat, Sep 13, 2014 at 7:15 AM, fereshteh komijani <
> fereshtehkomijani at gmail.com> wrote:
>
>>
>> fkomijani at fk1:~/program_install/COAWST$  mpif90 -v -o hello hello.F90
>> ./coawst.bash
>> mpif90 for MPICH version 3.0.4
>> Driving: gfortran -v -o hello hello.F90 ./coawst.bash
>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90 -lmpich -lopa
>> -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc
>> gfortran: error: hello.F90: No such file or directory
>> Using built-in specs.
>> COLLECT_GCC=gfortran
>> COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/4.6/lto-wrapper
>> Target: i686-linux-gnu
>> Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro
>> 4.6.3-1ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs
>> --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr
>> --program-suffix=-4.6 --enable-shared --enable-linker-build-id
>> --with-system-zlib --libexecdir=/usr/lib --without-included-gettext
>> --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6
>> --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
>> --enable-libstdcxx-debug --enable-libstdcxx-time=yes
>> --enable-gnu-unique-object --enable-plugin --enable-objc-gc
>> --enable-targets=all --disable-werror --with-arch-32=i686
>> --with-tune=generic --enable-checking=release --build=i686-linux-gnu
>> --host=i686-linux-gnu --target=i686-linux-gnu
>> Thread model: posix
>> gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5)
>>
>>
>> On Sat, Sep 13, 2014 at 4:33 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>> wrote:
>>
>>> That is strange.
>>> Could you compile the following program with "mpif90 -v -o hello
>>> hello.F90" and paste the output?
>>>
>>> ! hello.F90
>>> program main
>>>     implicit none
>>>     include 'mpif.h'
>>>     integer :: ierr
>>>
>>>     call MPI_Init(ierr)
>>>     call MPI_Finalize(ierr)
>>> end program
>>>
>>>
>>> --Junchao Zhang
>>>
>>> On Sat, Sep 13, 2014 at 6:24 AM, fereshteh komijani <
>>> fereshtehkomijani at gmail.com> wrote:
>>>
>>>> sorry that is my fault, it is mpif.h
>>>>
>>>> it seems that COAWST model is searching it, in -I/user/include
>>>> directory not in
>>>> /home/fkomijani/program_install/mpich-3.0.4/include.
>>>> so how can i set mentined directory in system environment?
>>>>
>>>> On Sat, Sep 13, 2014 at 3:45 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>>>> wrote:
>>>>
>>>>> The file name should be mpif.h, but not mpih.f.
>>>>> On Sep 13, 2014 1:45 AM, "fereshteh komijani" <
>>>>> fereshtehkomijani at gmail.com> wrote:
>>>>>
>>>>>> yes, /home/fkomijani/program_install/mpich-3.0.4/include contains
>>>>>> mpih.f
>>>>>>
>>>>>> On Sat, Sep 13, 2014 at 11:07 AM, Kenneth Raffenetti <
>>>>>> raffenet at mcs.anl.gov> wrote:
>>>>>>
>>>>>>> If you 'ls /home/fkomijani/program_install/mpich-3.0.4/include'
>>>>>>> does it contain an mpif.h file? If not, your MPICH installation might be
>>>>>>> bad.
>>>>>>>
>>>>>>> On 09/13/2014 03:24 PM, fereshteh komijani wrote:
>>>>>>>
>>>>>>>> gfortran -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>>>>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>>>>>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90
>>>>>>>> -lmpich
>>>>>>>> -lopa -lmpl -lrt -lpthread
>>>>>>>>
>>>>>>>>
>>>>>>>> On Sat, Sep 13, 2014 at 10:52 AM, Kenneth Raffenetti
>>>>>>>> <raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>> wrote:
>>>>>>>>
>>>>>>>>     What is the output from 'mpif90 -show'?
>>>>>>>>
>>>>>>>>     On 09/13/2014 03:19 PM, fereshteh komijani wrote:
>>>>>>>>
>>>>>>>>         dear Kenneth Raffenetti
>>>>>>>>         i am using mpif90 compiler.
>>>>>>>>         if it is, why i have got that error?
>>>>>>>>
>>>>>>>>         On Sat, Sep 13, 2014 at 10:47 AM, Kenneth Raffenetti
>>>>>>>>         <raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>
>>>>>>>>         <mailto:raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>>>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>              Are you using the mpif77 or mpif90 compiler wrappers to
>>>>>>>>         build your
>>>>>>>>              program? They will automatically add the location of
>>>>>>>> mpif.h
>>>>>>>>         to your
>>>>>>>>              include path.
>>>>>>>>
>>>>>>>>              On 09/13/2014 02:56 PM, fereshteh komijani wrote:
>>>>>>>>
>>>>>>>>                  Dear friends
>>>>>>>>
>>>>>>>>                  recently I have installed mpich 3.0.4 in my system
>>>>>>>>         (Ubuntu).
>>>>>>>>
>>>>>>>>                  After compiling my model (coawst) it gives me
>>>>>>>> following
>>>>>>>>         error :
>>>>>>>>
>>>>>>>>                  mod_parallel.f90:17: Error: Can't open included
>>>>>>>> file
>>>>>>>>         'mpif.h'
>>>>>>>>
>>>>>>>>                  coaws's developer tell me :
>>>>>>>>
>>>>>>>>                  *check your environment and see if the location of
>>>>>>>>         mpif.h is in your
>>>>>>>>                  INCLUDE list*.
>>>>>>>>
>>>>>>>>                  But I don't know what is its mean? Where and how I
>>>>>>>> can
>>>>>>>>         do that? Does
>>>>>>>>                  environment mean .bashrc?
>>>>>>>>
>>>>>>>>                  many thanks for any reply
>>>>>>>>
>>>>>>>>                  fereshteh
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>                  --
>>>>>>>>                  ***Angel***
>>>>>>>>                  *__*
>>>>>>>>
>>>>>>>>
>>>>>>>>                  ______________________________
>>>>>>>> _____________________
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>>>>>>>>         --
>>>>>>>>         ***Angel***
>>>>>>>>         *__*
>>>>>>>>
>>>>>>>>
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>>>>>>>> --
>>>>>>>> ***Angel***
>>>>>>>> *__*
>>>>>>>>
>>>>>>>>
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>>>>>> --
>>>>>> ***Angel***
>>>>>>
>>>>>>
>>>>>>
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>>>> ***Angel***
>>>>
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>> ***Angel***
>>
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-- 
***Angel***
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