[mpich-discuss] mpif.h

Junchao Zhang jczhang at mcs.anl.gov
Sat Sep 13 09:00:40 CDT 2014 

As you can see, hello.f90 contains
  include 'mpif.h'
and mpif90 found it and correctly compiled the code.

So, mpich installation is correct. You need to double check your code and
compilation commands.

--Junchao Zhang

On Sat, Sep 13, 2014 at 8:41 AM, fereshteh komijani <
fereshtehkomijani at gmail.com> wrote:

> i have created hello.F90 and after compiling, it gives
>
> fkomijani at fk1:~/program_install/COAWST$ mpif90 -v -o hello hello.F90
> mpif90 for MPICH version 3.0.4
> Driving: gfortran -v -o hello hello.F90
> -I/home/fkomijani/program_install/mpich-3.0.4/include
> -I/home/fkomijani/program_install/mpich-3.0.4/include
> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90 -lmpich -lopa
> -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc
> Using built-in specs.
> COLLECT_GCC=gfortran
> COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/4.6/lto-wrapper
> Target: i686-linux-gnu
> Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro
> 4.6.3-1ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs
> --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr
> --program-suffix=-4.6 --enable-shared --enable-linker-build-id
> --with-system-zlib --libexecdir=/usr/lib --without-included-gettext
> --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6
> --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
> --enable-libstdcxx-debug --enable-libstdcxx-time=yes
> --enable-gnu-unique-object --enable-plugin --enable-objc-gc
> --enable-targets=all --disable-werror --with-arch-32=i686
> --with-tune=generic --enable-checking=release --build=i686-linux-gnu
> --host=i686-linux-gnu --target=i686-linux-gnu
> Thread model: posix
> gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5)
> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include'
> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
> '-mtune=generic' '-march=i686'
>  /usr/lib/gcc/i686-linux-gnu/4.6/f951 hello.F90 -cpp=/tmp/ccgJjtSb.f90
> -quiet -v -I /home/fkomijani/program_install/mpich-3.0.4/include -I
> /home/fkomijani/program_install/mpich-3.0.4/include -imultilib .
> -imultiarch i386-linux-gnu hello.F90 -quiet -dumpbase hello.F90
> -mtune=generic -march=i686 -auxbase hello -version -fintrinsic-modules-path
> /usr/lib/gcc/i686-linux-gnu/4.6/finclude -o /tmp/ccV5Pu7p.s
> GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) version 4.6.3 (i686-linux-gnu)
>     compiled by GNU C version 4.6.3, GMP version 5.0.2, MPFR version
> 3.1.0-p3, MPC version 0.9
> GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
> ignoring nonexistent directory "/usr/local/include/i386-linux-gnu"
> ignoring nonexistent directory
> "/usr/lib/gcc/i686-linux-gnu/4.6/../../../../i686-linux-gnu/include"
> ignoring duplicate directory
> "/home/fkomijani/program_install/mpich-3.0.4/include"
> #include "..." search starts here:
> #include <...> search starts here:
>  /home/fkomijani/program_install/mpich-3.0.4/include
>  /usr/lib/gcc/i686-linux-gnu/4.6/finclude
>  /usr/lib/gcc/i686-linux-gnu/4.6/include
>  /usr/local/include
>  /usr/lib/gcc/i686-linux-gnu/4.6/include-fixed
>  /usr/include/i386-linux-gnu
>  /usr/include
> End of search list.
> GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) version 4.6.3 (i686-linux-gnu)
>     compiled by GNU C version 4.6.3, GMP version 5.0.2, MPFR version
> 3.1.0-p3, MPC version 0.9
> GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include'
> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
> '-mtune=generic' '-march=i686'
>  as --32 -o /tmp/ccPO4WoE.o /tmp/ccV5Pu7p.s
> Reading specs from /usr/lib/gcc/i686-linux-gnu/4.6/libgfortran.spec
> rename spec lib to liborig
> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include'
> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
> '-mtune=generic' '-march=i686'
>
> COMPILER_PATH=/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/
>
> LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../:/lib/:/usr/lib/
> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
> '/home/fkomijani/program_install/mpich-3.0.4/include'
> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
> '-mtune=generic' '-march=i686'
>  /usr/lib/gcc/i686-linux-gnu/4.6/collect2 --sysroot=/ --build-id
> --no-add-needed --as-needed --eh-frame-hdr -m elf_i386 --hash-style=gnu
> -dynamic-linker /lib/ld-linux.so.2 -z relro -o hello
> /usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crt1.o
> /usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crti.o
> /usr/lib/gcc/i686-linux-gnu/4.6/crtbegin.o
> -L/home/fkomijani/program_install/mpich-3.0.4/lib
> -L/usr/lib/gcc/i686-linux-gnu/4.6
> -L/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu
> -L/usr/lib/gcc/i686-linux-gnu/4.6/../../../../lib -L/lib/i386-linux-gnu
> -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib
> -L/usr/lib/gcc/i686-linux-gnu/4.6/../../.. /tmp/ccPO4WoE.o -lmpichf90
> -lmpich -lopa -lmpl -lrt -lpthread -lgfortran -lm -lgcc_s -lgcc -lquadmath
> -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc
> /usr/lib/gcc/i686-linux-gnu/4.6/crtend.o
> /usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crtn.o
>
>
> On Sat, Sep 13, 2014 at 5:28 PM, Junchao Zhang <jczhang at mcs.anl.gov>
> wrote:
>
>> "gfortran: error: hello.F90: No such file or directory"
>> You need to create hello.F90 as I said in the previous email.
>>
>> "mpif90 -v -o hello hello.F90 ./coawst.bash"
>> Also, do not add ./coawst.bash
>>
>>
>>
>> --Junchao Zhang
>>
>> On Sat, Sep 13, 2014 at 7:15 AM, fereshteh komijani <
>> fereshtehkomijani at gmail.com> wrote:
>>
>>>
>>> fkomijani at fk1:~/program_install/COAWST$  mpif90 -v -o hello hello.F90
>>> ./coawst.bash
>>> mpif90 for MPICH version 3.0.4
>>> Driving: gfortran -v -o hello hello.F90 ./coawst.bash
>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90 -lmpich -lopa
>>> -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc
>>> gfortran: error: hello.F90: No such file or directory
>>> Using built-in specs.
>>> COLLECT_GCC=gfortran
>>> COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/4.6/lto-wrapper
>>> Target: i686-linux-gnu
>>> Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro
>>> 4.6.3-1ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs
>>> --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr
>>> --program-suffix=-4.6 --enable-shared --enable-linker-build-id
>>> --with-system-zlib --libexecdir=/usr/lib --without-included-gettext
>>> --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6
>>> --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
>>> --enable-libstdcxx-debug --enable-libstdcxx-time=yes
>>> --enable-gnu-unique-object --enable-plugin --enable-objc-gc
>>> --enable-targets=all --disable-werror --with-arch-32=i686
>>> --with-tune=generic --enable-checking=release --build=i686-linux-gnu
>>> --host=i686-linux-gnu --target=i686-linux-gnu
>>> Thread model: posix
>>> gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5)
>>>
>>>
>>> On Sat, Sep 13, 2014 at 4:33 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>>> wrote:
>>>
>>>> That is strange.
>>>> Could you compile the following program with "mpif90 -v -o hello
>>>> hello.F90" and paste the output?
>>>>
>>>> ! hello.F90
>>>> program main
>>>>     implicit none
>>>>     include 'mpif.h'
>>>>     integer :: ierr
>>>>
>>>>     call MPI_Init(ierr)
>>>>     call MPI_Finalize(ierr)
>>>> end program
>>>>
>>>>
>>>> --Junchao Zhang
>>>>
>>>> On Sat, Sep 13, 2014 at 6:24 AM, fereshteh komijani <
>>>> fereshtehkomijani at gmail.com> wrote:
>>>>
>>>>> sorry that is my fault, it is mpif.h
>>>>>
>>>>> it seems that COAWST model is searching it, in -I/user/include
>>>>> directory not in
>>>>> /home/fkomijani/program_install/mpich-3.0.4/include.
>>>>> so how can i set mentined directory in system environment?
>>>>>
>>>>> On Sat, Sep 13, 2014 at 3:45 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>>>>> wrote:
>>>>>
>>>>>> The file name should be mpif.h, but not mpih.f.
>>>>>> On Sep 13, 2014 1:45 AM, "fereshteh komijani" <
>>>>>> fereshtehkomijani at gmail.com> wrote:
>>>>>>
>>>>>>> yes, /home/fkomijani/program_install/mpich-3.0.4/include contains
>>>>>>> mpih.f
>>>>>>>
>>>>>>> On Sat, Sep 13, 2014 at 11:07 AM, Kenneth Raffenetti <
>>>>>>> raffenet at mcs.anl.gov> wrote:
>>>>>>>
>>>>>>>> If you 'ls /home/fkomijani/program_install/mpich-3.0.4/include'
>>>>>>>> does it contain an mpif.h file? If not, your MPICH installation might be
>>>>>>>> bad.
>>>>>>>>
>>>>>>>> On 09/13/2014 03:24 PM, fereshteh komijani wrote:
>>>>>>>>
>>>>>>>>> gfortran -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>>>>>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>>>>>>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90
>>>>>>>>> -lmpich
>>>>>>>>> -lopa -lmpl -lrt -lpthread
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> On Sat, Sep 13, 2014 at 10:52 AM, Kenneth Raffenetti
>>>>>>>>> <raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>> wrote:
>>>>>>>>>
>>>>>>>>>     What is the output from 'mpif90 -show'?
>>>>>>>>>
>>>>>>>>>     On 09/13/2014 03:19 PM, fereshteh komijani wrote:
>>>>>>>>>
>>>>>>>>>         dear Kenneth Raffenetti
>>>>>>>>>         i am using mpif90 compiler.
>>>>>>>>>         if it is, why i have got that error?
>>>>>>>>>
>>>>>>>>>         On Sat, Sep 13, 2014 at 10:47 AM, Kenneth Raffenetti
>>>>>>>>>         <raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>
>>>>>>>>>         <mailto:raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov
>>>>>>>>> >>> wrote:
>>>>>>>>>
>>>>>>>>>              Are you using the mpif77 or mpif90 compiler wrappers
>>>>>>>>> to
>>>>>>>>>         build your
>>>>>>>>>              program? They will automatically add the location of
>>>>>>>>> mpif.h
>>>>>>>>>         to your
>>>>>>>>>              include path.
>>>>>>>>>
>>>>>>>>>              On 09/13/2014 02:56 PM, fereshteh komijani wrote:
>>>>>>>>>
>>>>>>>>>                  Dear friends
>>>>>>>>>
>>>>>>>>>                  recently I have installed mpich 3.0.4 in my system
>>>>>>>>>         (Ubuntu).
>>>>>>>>>
>>>>>>>>>                  After compiling my model (coawst) it gives me
>>>>>>>>> following
>>>>>>>>>         error :
>>>>>>>>>
>>>>>>>>>                  mod_parallel.f90:17: Error: Can't open included
>>>>>>>>> file
>>>>>>>>>         'mpif.h'
>>>>>>>>>
>>>>>>>>>                  coaws's developer tell me :
>>>>>>>>>
>>>>>>>>>                  *check your environment and see if the location of
>>>>>>>>>         mpif.h is in your
>>>>>>>>>                  INCLUDE list*.
>>>>>>>>>
>>>>>>>>>                  But I don't know what is its mean? Where and how
>>>>>>>>> I can
>>>>>>>>>         do that? Does
>>>>>>>>>                  environment mean .bashrc?
>>>>>>>>>
>>>>>>>>>                  many thanks for any reply
>>>>>>>>>
>>>>>>>>>                  fereshteh
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>                  --
>>>>>>>>>                  ***Angel***
>>>>>>>>>                  *__*
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>                  ______________________________
>>>>>>>>> _____________________
>>>>>>>>>                  discuss mailing list discuss at mpich.org
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>>>>>>>>>
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>>>>>>>>>
>>>>>>>>>
>>>>>>>>>         --
>>>>>>>>>         ***Angel***
>>>>>>>>>         *__*
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>         _________________________________________________
>>>>>>>>>         discuss mailing list discuss at mpich.org <mailto:
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>>>>>>>>>
>>>>>>>>> --
>>>>>>>>> ***Angel***
>>>>>>>>> *__*
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> _______________________________________________
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>>>>>>>
>>>>>>>
>>>>>>> --
>>>>>>> ***Angel***
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> discuss mailing list     discuss at mpich.org
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>>>>>>
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>>>>>>
>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> ***Angel***
>>>>>
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> discuss mailing list     discuss at mpich.org
>>>>> To manage subscription options or unsubscribe:
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>>>>>
>>>>
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>>>
>>>
>>> --
>>> ***Angel***
>>>
>>>
>>>
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>
>
>
> --
> ***Angel***
>
>
>
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