[mpich-discuss] mpif.h
fereshteh komijani
fereshtehkomijani at gmail.com
Sat Sep 13 09:23:09 CDT 2014
thanks so much for your attention
i will check in again
cheers
fereshte
On Sat, Sep 13, 2014 at 6:30 PM, Junchao Zhang <jczhang at mcs.anl.gov> wrote:
> As you can see, hello.f90 contains
> include 'mpif.h'
> and mpif90 found it and correctly compiled the code.
>
> So, mpich installation is correct. You need to double check your code and
> compilation commands.
>
> --Junchao Zhang
>
> On Sat, Sep 13, 2014 at 8:41 AM, fereshteh komijani <
> fereshtehkomijani at gmail.com> wrote:
>
>> i have created hello.F90 and after compiling, it gives
>>
>> fkomijani at fk1:~/program_install/COAWST$ mpif90 -v -o hello hello.F90
>> mpif90 for MPICH version 3.0.4
>> Driving: gfortran -v -o hello hello.F90
>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90 -lmpich -lopa
>> -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc
>> Using built-in specs.
>> COLLECT_GCC=gfortran
>> COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/4.6/lto-wrapper
>> Target: i686-linux-gnu
>> Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro
>> 4.6.3-1ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs
>> --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr
>> --program-suffix=-4.6 --enable-shared --enable-linker-build-id
>> --with-system-zlib --libexecdir=/usr/lib --without-included-gettext
>> --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6
>> --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
>> --enable-libstdcxx-debug --enable-libstdcxx-time=yes
>> --enable-gnu-unique-object --enable-plugin --enable-objc-gc
>> --enable-targets=all --disable-werror --with-arch-32=i686
>> --with-tune=generic --enable-checking=release --build=i686-linux-gnu
>> --host=i686-linux-gnu --target=i686-linux-gnu
>> Thread model: posix
>> gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5)
>> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include'
>> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
>> '-mtune=generic' '-march=i686'
>> /usr/lib/gcc/i686-linux-gnu/4.6/f951 hello.F90 -cpp=/tmp/ccgJjtSb.f90
>> -quiet -v -I /home/fkomijani/program_install/mpich-3.0.4/include -I
>> /home/fkomijani/program_install/mpich-3.0.4/include -imultilib .
>> -imultiarch i386-linux-gnu hello.F90 -quiet -dumpbase hello.F90
>> -mtune=generic -march=i686 -auxbase hello -version -fintrinsic-modules-path
>> /usr/lib/gcc/i686-linux-gnu/4.6/finclude -o /tmp/ccV5Pu7p.s
>> GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) version 4.6.3 (i686-linux-gnu)
>> compiled by GNU C version 4.6.3, GMP version 5.0.2, MPFR version
>> 3.1.0-p3, MPC version 0.9
>> GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
>> ignoring nonexistent directory "/usr/local/include/i386-linux-gnu"
>> ignoring nonexistent directory
>> "/usr/lib/gcc/i686-linux-gnu/4.6/../../../../i686-linux-gnu/include"
>> ignoring duplicate directory
>> "/home/fkomijani/program_install/mpich-3.0.4/include"
>> #include "..." search starts here:
>> #include <...> search starts here:
>> /home/fkomijani/program_install/mpich-3.0.4/include
>> /usr/lib/gcc/i686-linux-gnu/4.6/finclude
>> /usr/lib/gcc/i686-linux-gnu/4.6/include
>> /usr/local/include
>> /usr/lib/gcc/i686-linux-gnu/4.6/include-fixed
>> /usr/include/i386-linux-gnu
>> /usr/include
>> End of search list.
>> GNU Fortran (Ubuntu/Linaro 4.6.3-1ubuntu5) version 4.6.3 (i686-linux-gnu)
>> compiled by GNU C version 4.6.3, GMP version 5.0.2, MPFR version
>> 3.1.0-p3, MPC version 0.9
>> GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
>> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include'
>> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
>> '-mtune=generic' '-march=i686'
>> as --32 -o /tmp/ccPO4WoE.o /tmp/ccV5Pu7p.s
>> Reading specs from /usr/lib/gcc/i686-linux-gnu/4.6/libgfortran.spec
>> rename spec lib to liborig
>> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include'
>> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
>> '-mtune=generic' '-march=i686'
>>
>> COMPILER_PATH=/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/
>>
>> LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/4.6/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/4.6/../../../:/lib/:/usr/lib/
>> COLLECT_GCC_OPTIONS='-v' '-o' 'hello' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include' '-I'
>> '/home/fkomijani/program_install/mpich-3.0.4/include'
>> '-L/home/fkomijani/program_install/mpich-3.0.4/lib' '-shared-libgcc'
>> '-mtune=generic' '-march=i686'
>> /usr/lib/gcc/i686-linux-gnu/4.6/collect2 --sysroot=/ --build-id
>> --no-add-needed --as-needed --eh-frame-hdr -m elf_i386 --hash-style=gnu
>> -dynamic-linker /lib/ld-linux.so.2 -z relro -o hello
>> /usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crt1.o
>> /usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crti.o
>> /usr/lib/gcc/i686-linux-gnu/4.6/crtbegin.o
>> -L/home/fkomijani/program_install/mpich-3.0.4/lib
>> -L/usr/lib/gcc/i686-linux-gnu/4.6
>> -L/usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu
>> -L/usr/lib/gcc/i686-linux-gnu/4.6/../../../../lib -L/lib/i386-linux-gnu
>> -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib
>> -L/usr/lib/gcc/i686-linux-gnu/4.6/../../.. /tmp/ccPO4WoE.o -lmpichf90
>> -lmpich -lopa -lmpl -lrt -lpthread -lgfortran -lm -lgcc_s -lgcc -lquadmath
>> -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc
>> /usr/lib/gcc/i686-linux-gnu/4.6/crtend.o
>> /usr/lib/gcc/i686-linux-gnu/4.6/../../../i386-linux-gnu/crtn.o
>>
>>
>> On Sat, Sep 13, 2014 at 5:28 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>> wrote:
>>
>>> "gfortran: error: hello.F90: No such file or directory"
>>> You need to create hello.F90 as I said in the previous email.
>>>
>>> "mpif90 -v -o hello hello.F90 ./coawst.bash"
>>> Also, do not add ./coawst.bash
>>>
>>>
>>>
>>> --Junchao Zhang
>>>
>>> On Sat, Sep 13, 2014 at 7:15 AM, fereshteh komijani <
>>> fereshtehkomijani at gmail.com> wrote:
>>>
>>>>
>>>> fkomijani at fk1:~/program_install/COAWST$ mpif90 -v -o hello hello.F90
>>>> ./coawst.bash
>>>> mpif90 for MPICH version 3.0.4
>>>> Driving: gfortran -v -o hello hello.F90 ./coawst.bash
>>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90 -lmpich -lopa
>>>> -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc
>>>> gfortran: error: hello.F90: No such file or directory
>>>> Using built-in specs.
>>>> COLLECT_GCC=gfortran
>>>> COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-linux-gnu/4.6/lto-wrapper
>>>> Target: i686-linux-gnu
>>>> Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro
>>>> 4.6.3-1ubuntu5' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs
>>>> --enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr
>>>> --program-suffix=-4.6 --enable-shared --enable-linker-build-id
>>>> --with-system-zlib --libexecdir=/usr/lib --without-included-gettext
>>>> --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6
>>>> --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu
>>>> --enable-libstdcxx-debug --enable-libstdcxx-time=yes
>>>> --enable-gnu-unique-object --enable-plugin --enable-objc-gc
>>>> --enable-targets=all --disable-werror --with-arch-32=i686
>>>> --with-tune=generic --enable-checking=release --build=i686-linux-gnu
>>>> --host=i686-linux-gnu --target=i686-linux-gnu
>>>> Thread model: posix
>>>> gcc version 4.6.3 (Ubuntu/Linaro 4.6.3-1ubuntu5)
>>>>
>>>>
>>>> On Sat, Sep 13, 2014 at 4:33 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>>>> wrote:
>>>>
>>>>> That is strange.
>>>>> Could you compile the following program with "mpif90 -v -o hello
>>>>> hello.F90" and paste the output?
>>>>>
>>>>> ! hello.F90
>>>>> program main
>>>>> implicit none
>>>>> include 'mpif.h'
>>>>> integer :: ierr
>>>>>
>>>>> call MPI_Init(ierr)
>>>>> call MPI_Finalize(ierr)
>>>>> end program
>>>>>
>>>>>
>>>>> --Junchao Zhang
>>>>>
>>>>> On Sat, Sep 13, 2014 at 6:24 AM, fereshteh komijani <
>>>>> fereshtehkomijani at gmail.com> wrote:
>>>>>
>>>>>> sorry that is my fault, it is mpif.h
>>>>>>
>>>>>> it seems that COAWST model is searching it, in -I/user/include
>>>>>> directory not in
>>>>>> /home/fkomijani/program_install/mpich-3.0.4/include.
>>>>>> so how can i set mentined directory in system environment?
>>>>>>
>>>>>> On Sat, Sep 13, 2014 at 3:45 PM, Junchao Zhang <jczhang at mcs.anl.gov>
>>>>>> wrote:
>>>>>>
>>>>>>> The file name should be mpif.h, but not mpih.f.
>>>>>>> On Sep 13, 2014 1:45 AM, "fereshteh komijani" <
>>>>>>> fereshtehkomijani at gmail.com> wrote:
>>>>>>>
>>>>>>>> yes, /home/fkomijani/program_install/mpich-3.0.4/include contains
>>>>>>>> mpih.f
>>>>>>>>
>>>>>>>> On Sat, Sep 13, 2014 at 11:07 AM, Kenneth Raffenetti <
>>>>>>>> raffenet at mcs.anl.gov> wrote:
>>>>>>>>
>>>>>>>>> If you 'ls /home/fkomijani/program_install/mpich-3.0.4/include'
>>>>>>>>> does it contain an mpif.h file? If not, your MPICH installation might be
>>>>>>>>> bad.
>>>>>>>>>
>>>>>>>>> On 09/13/2014 03:24 PM, fereshteh komijani wrote:
>>>>>>>>>
>>>>>>>>>> gfortran -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>>>>>>>> -I/home/fkomijani/program_install/mpich-3.0.4/include
>>>>>>>>>> -L/home/fkomijani/program_install/mpich-3.0.4/lib -lmpichf90
>>>>>>>>>> -lmpich
>>>>>>>>>> -lopa -lmpl -lrt -lpthread
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> On Sat, Sep 13, 2014 at 10:52 AM, Kenneth Raffenetti
>>>>>>>>>> <raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>> wrote:
>>>>>>>>>>
>>>>>>>>>> What is the output from 'mpif90 -show'?
>>>>>>>>>>
>>>>>>>>>> On 09/13/2014 03:19 PM, fereshteh komijani wrote:
>>>>>>>>>>
>>>>>>>>>> dear Kenneth Raffenetti
>>>>>>>>>> i am using mpif90 compiler.
>>>>>>>>>> if it is, why i have got that error?
>>>>>>>>>>
>>>>>>>>>> On Sat, Sep 13, 2014 at 10:47 AM, Kenneth Raffenetti
>>>>>>>>>> <raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov>
>>>>>>>>>> <mailto:raffenet at mcs.anl.gov <mailto:raffenet at mcs.anl.gov
>>>>>>>>>> >>> wrote:
>>>>>>>>>>
>>>>>>>>>> Are you using the mpif77 or mpif90 compiler wrappers
>>>>>>>>>> to
>>>>>>>>>> build your
>>>>>>>>>> program? They will automatically add the location of
>>>>>>>>>> mpif.h
>>>>>>>>>> to your
>>>>>>>>>> include path.
>>>>>>>>>>
>>>>>>>>>> On 09/13/2014 02:56 PM, fereshteh komijani wrote:
>>>>>>>>>>
>>>>>>>>>> Dear friends
>>>>>>>>>>
>>>>>>>>>> recently I have installed mpich 3.0.4 in my
>>>>>>>>>> system
>>>>>>>>>> (Ubuntu).
>>>>>>>>>>
>>>>>>>>>> After compiling my model (coawst) it gives me
>>>>>>>>>> following
>>>>>>>>>> error :
>>>>>>>>>>
>>>>>>>>>> mod_parallel.f90:17: Error: Can't open included
>>>>>>>>>> file
>>>>>>>>>> 'mpif.h'
>>>>>>>>>>
>>>>>>>>>> coaws's developer tell me :
>>>>>>>>>>
>>>>>>>>>> *check your environment and see if the location
>>>>>>>>>> of
>>>>>>>>>> mpif.h is in your
>>>>>>>>>> INCLUDE list*.
>>>>>>>>>>
>>>>>>>>>> But I don't know what is its mean? Where and how
>>>>>>>>>> I can
>>>>>>>>>> do that? Does
>>>>>>>>>> environment mean .bashrc?
>>>>>>>>>>
>>>>>>>>>> many thanks for any reply
>>>>>>>>>>
>>>>>>>>>> fereshteh
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> --
>>>>>>>>>> ***Angel***
>>>>>>>>>> *__*
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> ______________________________
>>>>>>>>>> _____________________
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>>>>>>>>>> --
>>>>>>>>>> ***Angel***
>>>>>>>>>> *__*
>>>>>>>>>>
>>>>>>>>>>
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>>>>>>>>>> --
>>>>>>>>>> ***Angel***
>>>>>>>>>> *__*
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> _______________________________________________
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>>>>>>>>>> _______________________________________________
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>>>>>>>>
>>>>>>>>
>>>>>>>> --
>>>>>>>> ***Angel***
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> discuss mailing list discuss at mpich.org
>>>>>>>> To manage subscription options or unsubscribe:
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>>>>>>>
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>>>>>>
>>>>>>
>>>>>> --
>>>>>> ***Angel***
>>>>>>
>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> discuss mailing list discuss at mpich.org
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>>>>>>
>>>>>
>>>>>
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>>>>
>>>>
>>>> --
>>>> ***Angel***
>>>>
>>>>
>>>>
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>>
>> --
>> ***Angel***
>>
>>
>>
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>
>
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--
***Angel***
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