[mpich-discuss] mpich-3.2 34

Kenneth Raffenetti raffenet at mcs.anl.gov
Tue Jan 5 12:08:26 CST 2016


Hi,

Do you have a make log from the application you are trying to build that 
you can share?

Separately, did the example cpi application build successfully at the 
end of the MPICH build?

Ken

On 01/05/2016 02:44 AM, Professor W P Jones wrote:
> Hi
>
> I have successfully compiled and installed the version suggested.
> However when I attempt to to use make to compile and link it fails on
> the link step with the message:
>
> /usr/bin/ld: boffin: hidden symbol `lstat64' in
> /usr/lib64/libc_nonshared.a(lstat64.oS) is referenced by DSO
> /usr/bin/ld: final link failed: Nonrepresentable section on output
> make: [boffin] Error 1 (ignored)
> mv: cannot stat `./x86_64/boffin': No such file or directory
> make: *** [boffin] Error 1
>
> The log files generated  in the compiled and install are attached and
> the output from mpiexec -info is:
>
> HYDRA build details:
>      Version:                                 3.2
>      Release Date:                            Mon Jan  4 00:00:40 CST 2016
>      CC:                              icc
>      CXX:                             icpc
>      F77:                             lf95
>      F90:                             lf95
>      Configure options: '--disable-option-checking'
> '--prefix=/opt/mpich' '--enable-fortran=all' 'FC=lf95' 'F77=lf95'
> '--cache-file=/dev/null' '--srcdir=.' 'CC=icc' 'CFLAGS= -O2' 'LDFLAGS='
> 'LIBS=-lpthread ' 'CPPFLAGS=
> -I/usr/local/src/mpich-master-v3.2-42-g67631a5c0e9e/src/mpl/include
> -I/usr/local/src/mpich-master-v3.2-42-g67631a5c0e9e/src/mpl/include
> -I/usr/local/src/mpich-master-v3.2-42-g67631a5c0e9e/src/openpa/src
> -I/usr/local/src/mpich-master-v3.2-42-g67631a5c0e9e/src/openpa/src
> -D_REENTRANT
> -I/usr/local/src/mpich-master-v3.2-42-g67631a5c0e9e/src/mpi/romio/include'
> 'MPLLIBNAME=mpl'
>      Process Manager:                         pmi
>      Launchers available:                     ssh rsh fork slurm ll lsf
> sge manual persist
>      Topology libraries available:            hwloc
>      Resource management kernels available:   user slurm ll lsf sge pbs
> cobalt
>      Checkpointing libraries available:
>      Demux engines available:                 poll select
>
> Regards
> Bill
>
> Professor W P Jones
> Department of Mechanical Engineering
> Imperial College London
> Exhibition Road
> London SW7 2AZ
> Tel:    +44 (0)20 7594 7037/7033
> Mobile  +44 (0)776 495 9702
> Fax:    +44 (0)20 7594 5702
> E-mail:  w.jones at imperial.ac.uk
> web site: http://www.imperial.ac.uk/me
>
> On 04/01/16 15:55, Kenneth Raffenetti wrote:
>> Can you try the latest nightly tarball on the MPICH website? I
>> committed a patch last night that I believe addresses the issue. I
>> don't have a system with the lf95 compiler to test, so I just went
>> from the documentation.
>>
>> Ken
>>
>> On 12/27/2015 07:49 PM, Professor W P Jones wrote:
>>> Hi Pavan
>>>
>>> Here are all the existing log files.
>>>
>>> Regards
>>> Bill
>>>
>>> Professor W P Jones
>>> Department of Mechanical Engineering
>>> Imperial College London
>>> Exhibition Road
>>> London SW7 2AZ
>>> Tel:    +44 (0)20 7594 7037/7033
>>> Mobile  +44 (0)776 495 9702
>>> Fax:    +44 (0)20 7594 5702
>>> E-mail:  w.jones at imperial.ac.uk
>>> web site: http://www.imperial.ac.uk/me
>>>
>>> On 28/12/15 00:40, Balaji, Pavan wrote:
>>>> Could you send us the log files listed in the README?
>>>>
>>>> http://git.mpich.org/mpich.git/blob/HEAD:/README.vin#l235
>>>>
>>>>    -- Pavan
>>>>
>>>>> On Dec 27, 2015, at 5:34 AM, Professor W P Jones
>>>>> <w.jones at imperial.ac.uk> wrote:
>>>>>
>>>>> Hi
>>>>>
>>>>> I am trying to build MPICH-3.2 34 using  Lahey/Fujitsu Linux64
>>>>> Fortran Express Release L8.10b and I obtain the following error:
>>>>>
>>>>> checking for Fortran 90 module output directory flag...
>>>>> configure: error: FCMODOUTFLAG could not be determined but is
>>>>> critical for the current Fortran build system
>>>>>
>>>>> Please can you advise how this can be fixed?
>>>>>
>>>>> Many thanks
>>>>> Bill Jones
>>>>>
>>>>> --
>>>>> Professor W P Jones
>>>>> Department of Mechanical Engineering
>>>>> Imperial College London
>>>>> Exhibition Road
>>>>> London SW7 2AZ
>>>>> Tel:    +44 (0)20 7594 7037/7033
>>>>> Mobile  +44 (0)776 495 9702
>>>>> Fax:    +44 (0)20 7594 5702
>>>>> E-mail:  w.jones at imperial.ac.uk
>>>>> web site: http://www.imperial.ac.uk/me
>>>>>
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