[mpich-discuss] mpich-3.2.1 configure with orangefs-2.9

Weihao Liang lwhvinson1990 at gmail.com
Wed Nov 15 16:57:00 CST 2017 

Thank you! It is very helpful and solved my problem.

Vinson

On Tue, Nov 14, 2017 at 9:27 PM, Wei-keng Liao <wkliao at eecs.northwestern.edu
> wrote:

> Try the following configure command, by adding the PVFS2 include path to
> CPPFLAGS,
> library path to LDFLAGS and -lpvfs2 to LIBS.
>
> ./configure --prefix=/path/to/install \
>             --enable-romio \
>             --with-file-system=ufs+pvfs2 \
>             CPPFLAGS="-I/opt/orangefs/include" \
>             LDFLAGS="-L/opt/orangefs/lib" \
>             LIBS="-lpvfs2"
>
> Wei-keng
>
> On Nov 14, 2017, at 9:16 PM, Weihao Liang wrote:
>
> > Thank you. I have tried the LD_LIBRARY_PATH way and adding
> "-L/opt/orangefs/lib  -lpvfs2" to the link command line but the errors
> still happen. So i think maybe still is there something wrong when i built
> the MPICH?
> >
> > Vinson.
> > On Tue, Nov 14, 2017 at 9:04 PM, Jeff Hammond <jeff.science at gmail.com>
> wrote:
> > The PVFS library needs to be in LD_LIBRARY_PATH or otherwise visible to
> the linker.
> >
> > Jeff
> >
> > On Tue, Nov 14, 2017 at 7:00 PM Weihao Liang <lwhvinson1990 at gmail.com>
> wrote:
> > Thanks, I have sucessfully built MPICH with configure command line
> "CFLAGS+='/opt/orangefs/include' ./configure --enable-romio
> --with-file-system=pvfs2". But when I link the the .o file with mpicc there
> are many errors as below:
> > =============================
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_FLOAT'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_indexed'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_CHAR'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_hvector'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_resized'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_finalize'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_dist_setparam'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_perror'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_UNSIGNED_CHAR'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_wait'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_truncate'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_free'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_flush'
> > /usr/local/lib/libmpi.so: undefined reference to
> `PVFS_debug_eventlog_to_mask'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_LONG'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_lookup'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_DOUBLE'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_SHORT'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_create'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_remove'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_BYTE'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_util_resolve'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_dist_lookup'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_io'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_vector'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_INT'
> > /usr/local/lib/libmpi.so: undefined reference to
> `PVFS_Request_contiguous'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_testsome'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_LONG_DOUBLE'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_struct'
> > /usr/local/lib/libmpi.so: undefined reference to
> `PVFS_util_init_defaults'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_Request_hindexed'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_UNSIGNED_LONG'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_isys_io'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_UNSIGNED'
> > /usr/local/lib/libmpi.so: undefined reference to
> `PVFS_util_gen_credential_defaults'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_getparent'
> > /usr/local/lib/libmpi.so: undefined reference to `PVFS_sys_getattr'
> > collect2: error: ld returned 1 exit status
> > ===============================================
> >
> > Vinson
> >
> > On Tue, Nov 14, 2017 at 6:08 PM, Latham, Robert J. <robl at mcs.anl.gov>
> wrote:
> > On Tue, 2017-11-14 at 16:54 -0600, Weihao Liang wrote:
> > > Hi, all
> > >
> > > I have a question is that how to configure mpich-3.2.1 with orangefs-
> > > 2.9 (pvfs2)? I just want to enable the MPI-IO ability when running
> > > MPI program on pvfs2 filesystem.
> >
> > The process is still the same it has always been.  OrangeFS is a
> > rebranding of what we used to call PVFS v2 :
> >
> > Configure MPICH with the `--with-file-system=pvfs2` flag.
> >
> > If you want to configure other file systems, add them with '+':
> >
> > `configure --prefix=/usr/local/whatever --with-file-system=pvfs2+ufs`
> >
> > ==rob
> > _______________________________________________
> > discuss mailing list     discuss at mpich.org
> > To manage subscription options or unsubscribe:
> > https://lists.mpich.org/mailman/listinfo/discuss
> >
> > _______________________________________________
> > discuss mailing list     discuss at mpich.org
> > To manage subscription options or unsubscribe:
> > https://lists.mpich.org/mailman/listinfo/discuss
> > --
> > Jeff Hammond
> > jeff.science at gmail.com
> > http://jeffhammond.github.io/
> >
> > _______________________________________________
> > discuss mailing list     discuss at mpich.org
> > To manage subscription options or unsubscribe:
> > https://lists.mpich.org/mailman/listinfo/discuss
> >
> > _______________________________________________
> > discuss mailing list     discuss at mpich.org
> > To manage subscription options or unsubscribe:
> > https://lists.mpich.org/mailman/listinfo/discuss
>
> _______________________________________________
> discuss mailing list     discuss at mpich.org
> To manage subscription options or unsubscribe:
> https://lists.mpich.org/mailman/listinfo/discuss
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mpich.org/pipermail/discuss/attachments/20171115/9848daa0/attachment.html>
-------------- next part --------------
_______________________________________________
discuss mailing list     discuss at mpich.org
To manage subscription options or unsubscribe:
https://lists.mpich.org/mailman/listinfo/discuss

More information about the discuss mailing list