[mpich-discuss] Fwd: MPICH 3.3.1 tests fail
Benson Muite
benson_muite at emailplus.org
Fri Oct 4 08:20:34 CDT 2019
Hi,
You would want some of the drivers for the other communication stacks,
but TCP/IP should already be available on your system. You may want to
check the hardware available on your server farm to decide best
communication software stack to use.
Benson
On 10/4/19 4:13 PM, Mark Cunningham via discuss wrote:
> I was unaware that there was a repository in Ubuntu. So, if there are
> binaries available, that solves my immediate problem.
>
> But, I was under the impression that the default build would do
> ch3:nemesis anyway, so isn't the --with-device really a no-op?
> We also have a bigger server farm, which is why I was fiddling with
> the ofi bit.
> Thanks,
> Mark
>
> On Fri, Oct 4, 2019 at 8:51 AM Benson Muite via discuss
> <discuss at mpich.org <mailto:discuss at mpich.org>> wrote:
>
> Ok. Does MPICH from Ubuntu repositories work?
>
> Have you tried a basic build:
>
> ./configure --prefix=/home/share/mpich/mpich-3.3.1
>
>
> On 10/4/19 3:42 PM, Mark Cunningham via discuss wrote:
>> This is just running in shared memory for the test.
>>
>>
>> On Fri, Oct 4, 2019 at 8:41 AM Benson Muite via discuss
>> <discuss at mpich.org <mailto:discuss at mpich.org>> wrote:
>>
>> Hi Mark,
>>
>> What interconnect is on your machine?
>>
>> Regards,
>>
>> Benson
>>
>> On 10/4/19 3:37 PM, Mark Cunningham via discuss wrote:
>>> Oops, sorry I forgot the attachment.
>>>
>>> ---------- Forwarded message ---------
>>> From: *Mark Cunningham* <mark.cunningham at ariacoustics.com
>>> <mailto:mark.cunningham at ariacoustics.com>>
>>> Date: Fri, Oct 4, 2019 at 8:35 AM
>>> Subject: MPICH 3.3.1 tests fail
>>> To: <discuss at mpich.org <mailto:discuss at mpich.org>>
>>>
>>>
>>> I have built MPICH 3.3.1 on Ubuntu 18.04 with the gcc-7
>>> compiler suite. (Build script is provided: build_mpich.) I
>>> have built with both --with-device=ch3:nemesis and
>>> --with-device=ch3:nemesis:ofi
>>> with the same outcome in the make test. A dozen of the
>>> tests fail with timeouts.
>>> I ran the test on an 8 processor Thinkstation but what would
>>> be beneficial is some sort of sense of what the test results
>>> should be. I've browsed the test results that you've posted
>>> but these appear to be summaries that conclude All Tests
>>> Passed, without individual timings for each test.
>>>
>>> In any case, I would appreciate any guidance that you might
>>> be able to provide. I have provided the config files and
>>> the summary.junit.xml file. (On my machine the summary.xml
>>> file just reports that there is an error on line 9562.) The
>>> result of mpiexec -info is:
>>> ~/build/mpich-3.3.1/src/pm/hydra % ./mpiexec.hydra -info
>>> HYDRA build details:
>>> Version: 3.3.1
>>> Release Date: Wed Jun 5 14:57:33 CDT 2019
>>> CC: gcc
>>> CXX: g++
>>> F77: gfortran
>>> F90: gfortran
>>> Configure options: '--disable-option-checking'
>>> '--prefix=/home/share/mpich/mpich-3.3.1'
>>> '--with-devce=ch3:nemesis' '--cache-file=/dev/null'
>>> '--srcdir=.' 'CC=gcc' 'CFLAGS= -O2' 'LDFLAGS=' 'LIBS='
>>> 'CPPFLAGS= -I/home/mark/buildmpich-3.3.1/src/mpl/include
>>> -I/home/mark/build/mpich-3.3.1/src/mpl/include
>>> -I/home/mark/build/mpich-3.3.1/src/openpa/src
>>> -I/hme/mark/build/mpich-3.3.1/src/openpa/src -D_REENTRANT
>>> -I/home/mark/build/mpich-3.3.1/src/mpi/romio/include'
>>> 'MPLLIBNAME=mpl'
>>> Process Manager: pmi
>>> Launchers available: ssh rsh fork slurm ll lsf
>>> sge manual persist
>>> Topology libraries available: hwloc
>>> Resource management kernels available: user slurm ll
>>> lsf sge pbs cobalt
>>> Checkpointing libraries available:
>>> Demux engines available: poll select
>>> ---------------------------------------------------------
>>> Thanks for your help,
>>> Mark
>>>
>>> Mark A Cunningham, PhD
>>> Senior Scientist
>>> Applied Research in Acoustics LLC
>>> Culpeper VA 22701
>>>
>>>
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